Ll_transcript_299228

• Id Trinity: TRINITY_DN51501_c1_g1_i39
• Name Transcript: Ll_transcript_299228
• Sequence: CAAACATTTTAACGGTACAGAAGCGCAACCTTCACCTGAGTCTGAAGGGGCAAAGGAGTATCTTTCTCTTCTTTCCTCTCAATTCAAAACCTAACCACAC AATTAGAATTAGATCCCTAATTCCCAACCTCACATTTTCTCATCCGAGAGGAAAACGAATCCACAACCGATCCAATGAAGCTTTGAATCGCGTGTTGATC TCTTATTGAGATGGATGATGACATGTCAAAATAATCTCTGATACCGGAAAGCTGAAATTTTTGGTTTATTTGAGCTAGCGTGTTTTGAAATAGAGAGAAA GAGAAAGAGGGGGTGGTTTATGGGGATGGGTTCCAAGATAGAAGGACCATCTACCCCAGCAAATCGACGTGATCCTTATGAGGTTTTGTCCGTTACACGG GACGCTACCGATCAAGAAATCAAAACCGCTTACAGAAAGCTAGCTCTTAAGTATCACCCTGACAAGAATGCTAGCAATCCTGAAGCTTCAGAACTATTTA AGGAGGTTGCATACTCTTATACTATCTTGTCTGATCCAGAGAAGAGAAGGCAGTATGACAGTGCAGGATTTGAGGCACTTGATGCTGATAGCATGGACAT GGAAATTGACTTATCTAATCTCGGGACTGTCAACACAGTGTTTGCGGCATTATTCAGCAAGCTGGGTGTCCCTATCAAGACTTCCGTTTCAGCCAATGTA CTTGAAGAAGCTCTTAATGGCACTGTTACCGTCAGACCCCTACCCATTGGAACATCAGTTAGTGGAAAGGTAGAGAAGCAATGTGCTCATTTTTTTGGCG TGACAATAAATGAGCAGCAAGCTCAGTCAGGGATTGTAATAAGAGCTACTTCAACTGCACAAAGCAAATTCAAGTTGCTCTACTTTGAACAAGATGCAAA TGGTGGTTATGGTTTGGCGTTACAGGAAGATAGCGAGAAAACTGGCAAGGTGACATCTGCAGGAATGTATTTCTTACATTTTCAAGTGTACAGAATGGAT TCAACTGTGAATACGTTAGCAATGGCCAAGGATCCTGAAGGGGCTTTCTTTAAAAGGTTGGAAGGTCTTCAACCTTGTGAAGTCTCCGAACTGAAGCCTG GCACTCATATCTTTGCTGTTTATGGGGATAACTTCTTTAAGACTGCTAGTTATACAATTGAGGCAGTATGTGCAAAATCACATGAAGATACCAACAAAAA GCTTATGGACATTGAGGCTCAAATATTAAGAAAGAGGAATGAGCTACGCCAATTTGAAGCAGAATATAGAAAGGCATTGGCACGTTATCAAGAAGTGACA GACAGATACACAAAAGAAAAACAGTCTGTACGTTCTTTCAACTTGTGCTACAGGACAAGTGCATATCTGGAAATCCACACATTTGCATTATTTTTAGTAC TAATTCTGCCCAGTTTAGTTAAAAATTAGTTGAGAAAATAACATATGTTCCACTTGAGTTGTGAGGCTAGATCAGTTGGGACAATCATATCACTACTTGC TTGGTCGGGCCAAAGTAGAGCACCAAAGCCCATAATTTGTACCATCACAGATGTATAAGTTTTAAAGGGGAAAAGGGAAATAAGTCAATTCTTGTGTCAT AAGATGCTCATCTTAGGCTGGCCTTAAATGTACATTATTCTGTGAAGATGATGTACGAAATGTCATAGAAACAACTATCCTAAAAGGTAACTGTTAGGAC CAATTTGCAAGGGATAGGACTCAAGTCTGATTTGGGAGTATGGAATTCAAATGTGGGGTTTATAAGACCTTGGACCTCTCATGGTTCTTATCAATAACCT ATTAGGTGTATACCCAAGAATGGTTTAAATCTCTAAGATGTAATTTATGTTTGTGACTGTGTTGGGTCTTTTATTTGCTACGCAGGTAGACGAGCTTTTG AAACAAAGGGACAGTATCCATTCTTCCTTCACCATTGTCAAGTCAACCACAATTAGTGGGAGTGCTAGTAATTTAAGCAATGGAAGTTCTAGCAAAATTT CTGGTGAAGAGAGCCCTGAGGATGGAGGGTCAGATGAGAAGGATAAATCAGGCAAAAAGAAATGGTTTAACCTCAATCTCAAGGGTTCTGATAAGAAGTT GATTTAAAAGTCACTTGATTTTGCTGGTCTCTATCAATTACAGTCATGGCATCAAACTTAGCATCCTGTGGATGTTCCCCTTGCATTATATATCTGGAAC ATGTCCCTTCTCTGCTTGGTTACACCAAGGTTGTAAACTGGTTTTGTTAGTCTATTCATTAGTATTGCACTCTATGTCAAAGGCATATATATATGTCTCT ACCTGTTTCCAATTTTTTGTAATCCAATTCCAATGTAATACTGTGGACATATATAGTTTTGATACTGTAATGGTAATATTCATTCTTGTAACAGTTTTGT TCATCATTACTATTTATCATCTATGATGCCAACTTCAT
• Tissue: pods
• Gene name: LI_gene_185396;
• Additional information: details;

Expression of Ll_transcript_299228

FPKM

• PAB: 0
• PNAB: 5.6
• PS1: 3.7
• PS2: 1.9
• PS3: 0.2
• PW1: 3
• PW2: 1.8
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_299228

• Blastp: Chaperone protein dnaJ 15 from Arabidopsis with 86.75% of identity
• Blastx: Chaperone protein dnaJ 15 from Arabidopsis with 86.75% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (AT1G68370)
• CantataDB: Link to cantataDB annotations (CNT0000899)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441409.1)
• Pfam: DnaJ domain (PF00226.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;