Ll_transcript_299193

• Id Trinity: TRINITY_DN51501_c1_g1_i4
• Name Transcript: Ll_transcript_299193
• Sequence: CAAACATTTTAACGGTACAGAAGCGCAACCTTCACCTGAGTCTGAAGGGGCAAAGGAGTATCTTTCTCTTCTTTCCTCTCAATTCAAAACCTAACCACAC AATTAGAATTAGATCCCTAATTCCCAACCTCACATTTTCTCATCCGAGAGGAAAACGAATCCACAACCGATCCAATGAAGCTTTGAATCGCGTGTTGATC TCTTATTGAGATGGATGATGACATGTCAAAATAATCTCTGATACCGGAAAGCTGAAATTTTTGGTTTATTTGAGCTAGCGTGTTTTGAAATAGAGAGAAA GAGAAAGAGGGGGTGGTTTATGGGGATGGGTTCCAAGATAGAAGGACCATCTACCCCAGCAAATCGACGTGATCCTTATGAGGTTTTGTCCGTTACACGG GACGCTACCGATCAAGAAATCAAAACCGCTTACAGAAAGCTAGCTCTTAAGTATCACCCTGACAAGAATGCTAGCAATCCTGAAGCTTCAGAACTATTTA AGGAGGTTGCATACTCTTATACTATCTTGTCTGATCCAGAGAAGAGAAGGCAGTATGACAGTGCAGGATTTGAGGCACTTGATGCTGATAGCATGGACAT GGAAATTGACTTATCTAATCTCGGGACTGTCAACACAGTGTTTGCGGCATTATTCAGCAAGCTGGGTGTCCCTATCAAGACTTCCGTTTCAGCCAATGTA CTTGAAGAAGCTCTTAATGGCACTGTTACCGTCAGACCCCTACCCATTGGAACATCAGTTAGTGGAAAGGTAGAGAAGCAATGTGCTCATTTTTTTGGCG TGACAATAAATGAGCAGCAAGCTCAGTCAGGGATTGTAATAAGAGCTACTTCAACTGCACAAAGCAAATTCAAGTTGCTCTACTTTGAACAAGATGCAAA TGGTGGTTATGGTTTGGCGTTACAGGAAGATAGCGAGAAAACTGGCAAGGTGACATCTGCAGGAATGTATTTCTTACATTTTCAAGTGTACAGAATGGAT TCAACTGTGAATGCGTTAGCAATGGCCAAGGATCCTGAAGGGGCTTTCTTTAAAAGGTTGGAAGGTCTTCAACCTTGTGAAGTCTCAGCACTAAAGCCTG GCACTCATATCTTTGCTGTTTATGGGGATAACTTCTTTAAGACTGCTAGCTATATGATTGAGGCAGTATGTGCAAAATCACATGAAGACACCACCCAAAA GCTTATGGACACTGAGGCTCAAATTTTAAGAAAGAGGAATGAACTGCGCCAATTTGAAGTAGAATATAGAAAGGCACTGGCACACTATCAGGAAGCGACA GATAGATACACAAAAGAAAAACAGTCTGTAGATGAACTTCTGAAACAAAGGGATAGTATCCATTCTTCTTTCACTGTTGTCAAGTCAACGACTAGTAATT TAAGCAATGGAAGTTCTAGCAAAATTTCTGGTGAAGGGAGCCCTGAGGATGGAGGGTCAGATGGAAAGGATAAATCTACCAAAAAGAAATGGTTTAACCT CAATCTTAAGGGTTCTGATAAGAGTCTGCTTTAAAATCCACTTCATTTTTCTGGTCTCTTATCAATTACAGTCATGACATCAAACTTAGCACCCAGCAGA TTTTCGGCTTGCATTATATGTCTGCAATATTCTCTTTCTTTGCTTGGTTCCACCAAGGTTGTAAACTGGTTTATTAGTCTACAGTATGTGGTTGCACTCT AAGGTATATGTCTCTTCATGTTTCAATTTTTTTGTCATCTAATGATTCTCATACAATTCCTTTGTAGCATCTTGAACATAATATAGTTCTGATATTGTAA TGATACATTCATTCTTGTAGCAGTTTTGTTCATCATTGCTCTATCATCTATGACACCCCTTGGAGGATATTTCATTAATCTGCATGTGTAATAATTGCAT AACCTTACTCAATTATTACTGTAATTTGCATGTGCAATAATTGCTTACTCAACTTTTGTAACAGTTTTGATTGTGCCTAAGGTGATCTATAAAGCCCAAC GCTGGAGCTTAGGAATTATCCCTGACCCATAAATTTGGATGCAAAAGGAAAATTATAACTATTAAGTAAACCTGTGTTTTTAATTACTAACATGTATATC ATTCGCATAAATATATTTGAGTACTTAAGAAAAAAGTTACTTTTATCTTCTTAGTTCATTAACTAAATTGTAACTTTTAATGCGAC
• Tissue: pods
• Gene name: LI_gene_185396;
• Additional information: details;

Expression of Ll_transcript_299193

FPKM

• PAB: 2.8
• PNAB: 3.4
• PS1: 4.6
• PS2: 3.5
• PS3: 3.8
• PW1: 5.2
• PW2: 6.8
• PW3: 4.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_299193

• Blastp: Chaperone protein dnaJ 15 from Arabidopsis with 81.53% of identity
• Blastx: Chaperone protein dnaJ 15 from Arabidopsis with 78.52% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (AT1G68370)
• CantataDB: Link to cantataDB annotations (CNT0000899)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441409.1)
• Pfam: DnaJ domain (PF00226.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;