| Id Trinity | TRINITY_DN51501_c1_g1_i40 |
|---|---|
| Name Transcript | Ll_transcript_299229 |
| Sequence | CATTACAGAAGCGCGACCTTCACTGAGTCTGAAGTGGACAAAGGAGTTTCTTTCTCTTTTTTCCTTCAAATTTCAAAACCTAATCTCACACCTTTTTCTC TTCCTCATTTCACTCGCTTAGGTTAGAATCAGATCCCTAATTCCCTACCTCACTTTTTCTCATCCCGAGAGAAAAAGGAATTCCAATGAAACTTTGAATC GCGTGTTGATCTCTTATTGTGATGAATAAAAACTCTGAAACCATAAAGCTGATTATTTTTTGTTTTATTTGATCTGGTGTGTGTTTTCCAATAGAGAAAG AGAAGCTGGTGTATGGTGATGGGTTCGAAGATTGAAGGACAATCTACGCCAGCAAATCGACGTGATCCTTATGAGGTTTTATCTGTAACAAGAGACTCTA CAGATCAAGAAATCAAATCTGCTTACAGAAAGCTAGCTCTCAAGTATCACCCTGACAAGAATGCCAGCAATCCCGAGGCTTCAGAACTATTTAAGGAGGT CGCATATTCTTACAGCATATTGTCTGACCCAGAGAAGAGAAGGCAGTATGATAGTGCAGGATTTCAGGCACTTGATGCTGATAGCATGGACATGGAAATT GACTTATCTAATCTCGGGACTGTCAACACAGTGTTTGCGGCATTATTCAGCAAGCTGGGTGTCCCTATCAAGACTTCCGTTTCAGCCAATGTACTTGAAG AAGCTCTTAATGGCACTGTTACCGTCAGACCCCTACCCATTGGAACATCAGTTAGTGGAAAGGTAGAGAAGCAATGTGCTCATTTTTTTGGCGTGACAAT AAATGAGCAGCAAGCTCAGTCAGGGATTGTAATAAGAGCTACTTCAACTGCACAAAGCAAATTCAAGTTGCTCTACTTTGAACAAGATGCAAATGGTGGT TATGGTTTGGCGTTACAGGAAGATAGCGAGAAAACTGGCAAGGTGACATCTGCAGGAATGTATTTCTTACATTTTCAAGTGTACAGAATGGATTCAACTG TGAATGCGTTAGCAATGGCCAAGGATCCTGAAGGGGCTTTCTTTAAAAGGTTGGAAGGTCTTCAACCTTGTGAAGTCTCAGCACTAAAGCCTGGCACTCA TATCTTTGCTGTTTATGGGGATAACTTCTTTAAGACTGCTAGCTATATGATTGAGGCAGTATGTGCAAAATCACATGAAGACACCACCCAAAAGCTTATG GACACTGAGGCTCAAATTTTAAGAAAGAGGAATGAACTGCGCCAATTTGAAGTAGAATATAGAAAGGCACTGGCACACTATCAGGAAGCGACAGATAGAT ACACAAAAGAAAAACAGTCTGTAGATGAACTTCTGAAACAAAGGGATAGTATCCATTCTTCTTTCACTGTTGTCAAGTCAACGACTAGTAATTTAAGCAA TGGAAGTTCTAGCAAAATTTCTGGTGAAGGGAGCCCTGAGGATGGAGGGTCAGATGGAAAGGATAAATCTACCAAAAAGAAATGGTTTAACCTCAATCTT AAGGGTTCTGATAAGAGTCTGCTTTAAAATCCACTTCATTTTTCTGGTCTCTTATCAATTACAGTCATGACATCAAACTTAGCACCCAGCAGATTTTCGG CTTGCATTATATGTCTGCAATATTCTCTTTCTTTGCTTGGTTCCACCAAGGTTGTAAACTGGTTTATTAGTCTACAGTATGTGGTTGCACTCTAAGGTAT ATGTCTCTTCATGTTTCAATTTTTTTGTCATCTAATGATTCTCATACAATTCCTTTGTAGCATCTTGAACATAATATAGTTCTGATATTGTAATGATACA TTCATTCTTGTAGCAGTTTTGTTCATCATTGCTCTATCATCTATGACACCCCTTGGAGGATATTTCATTAATCTGCATGTGTAATAATTGCGTAACCTTA GGATTGTTTTTCTAGCCGACCTTACCTAGTAGGATAAATGTTTGACAATTAGTATAATAAGTGCATAACCTAAGAGATTCATAGAATATTTGTTCAGCTT TACTCTTCAGGTTTTGACTTTTGGTTGGGCCTAAGGTGATCTATAAAGCCAGACGCTAGAGCTTGGGAATTATCTCTGCCCCGTAAATTTGGAATGGGCT CTTTATGCAAAAGAAAATTATAACTATAAGTAAATCAGTTTTTTAAATTACCGACATGTTTACCATTGGTTGAATGGATTGAATAAATGTCTCTCTTTAT ATTTCATTTATCACATTTGCTTCCGAATCCTGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_185396; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_299229
| Blastp | Chaperone protein dnaJ 15 from Arabidopsis with 81.53% of identity |
|---|---|
| Blastx | Chaperone protein dnaJ 15 from Arabidopsis with 78.52% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (AT1G68370) |
| CantataDB | Link to cantataDB annotations (CNT0000899) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441409.1) |
| Pfam | DnaJ domain (PF00226.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |