Ll_transcript_299195

• Id Trinity: TRINITY_DN51501_c1_g1_i6
• Name Transcript: Ll_transcript_299195
• Sequence: GTAAATTTAAATAAAAAATATTGGGTGGCTTATGAGTGGAACACTTGAAGTCTTGAACCCGACCCTATAAGAAAAAACCCATGAAAAATTAAGGCACCAT GATTTAAAAAATAAAATATTTATATTATGTTATTTTTATTTAAGAGTTAATAATAATATAAAAACTCCTACAATATTATATGAAAATGAAAAGAAAATAA ATAAAAAGAATTGAAAAAAGTACAACATCCCTGTGATTAGTCGTATACAAACATTTTACATTACAGAAGCACGACCTTCACCTGAGTCTGAAGAGACAAA CGAAGAAAGAGGGGTTGGTGTATAAGCATGGGTTCCAAGATAGAAGGATCATCTACCCAAACAAATCGACGTGACCCTTACGAGGTTTTATCTCTCACAA GGGACTCTACTGATCAAGAAATCAAAACTGCTTACAGAAAGCTAGCTCTCAAGTATCACCCGGACAAGAATGCCAGCAATCCTGAAGCTTCAGAACTATT TAAGGAGGTTGCATATTCGTATAGTATCTTGTCTGACCCAGAGAAGAGACGGCAGTATAACAGTGCAGGATTTGAGGCACTTGATGCTGATGGCATGGAG GTGGAAATTGACTTATCTAATCTTGGGACTGTCAACACAGTGTTTGCAGCTTTATTCAGCAAGCTGGGTGTTCCTATCAAGACTACTATTTCAGCTAATG TACTTGAAGAAGCTCTGAATGGCACTGTTACAGTCAGACCCCTTCCGATTGGAACATCAGTTAGTGGAAAGGTAGAGAAGCAATGTGCTCATTTTTTTGG CGTGACAATAAATGAGCAGCAAGCTCAGTCAGGGATTGTAATAAGAGCTACTTCAACTGCACAAAGCAAATTCAAGTTGCTCTACTTTGAACAAGATGCA AATGGTGGTTATGGTTTGGCGTTACAGGAAGATAGCGAGAAAACTGGCAAGGTGACATCTGCAGGAATGTATTTCTTACATTTTCAAGTGTACAGAATGG ATTCAACTGTGAATGCGTTAGCAATGGCCAAGGATCCTGAAGGGGCTTTCTTTAAAAGGTTGGAAGGTCTTCAACCTTGTGAAGTCTCAGCACTAAAGCC TGGCACTCATATCTTTGCTGTTTATGGGGATAACTTCTTTAAGACTGCTAGCTATATGATTGAGGCAGTATGTGCAAAATCACATGAAGACACCACCCAA AAGCTTATGGACACTGAGGCTCAAATTTTAAGAAAGAGGAATGAACTGCGCCAATTTGAAGTAGAATATAGAAAGGCACTGGCACACTATCAGGAAGCGA CAGATAGATACACAAAAGAAAAACAGTCTGTACGTTCTTTTTACTTGTGCTACAGTTACAAAACACGTGCACATCTGAAAATTCAAACGCATTCTTTTTA CTACTTTGTTTTTGCCCACAACTTAGATAAAAAATAGTTGGAAATATCATATATGTTATTGAGTTGTGGCAAACTAGATCAATTAGAAAGATTATATCCT TGTTTTTTGGATGGCAAAATAGAGCCCATAATCTGTACCCATCACAAATGCATATAGCTTAAAAGGGGGGAAAGGAAACAAGTCAATTGTGTCATGAGAT GCTCATCCTAGGTTGGGCTTCAATGTGCATTATTATGTGAATATGATGCCAAATGTCAGAGAAACATCTATTCTAAAGGATAACCTATTAGGTTTAGGTC CAAGAATGGTTGAAGTCACTAACCCTCCCTTCATACAACATTTACATGGCTTGAAGCATGAATAAAGATCATGAACTGAAACCTTGGGCTAGAAAATCTG TCCAGAAAAACGGGGTGCAAGTGTCAGTCTCAATCCCTTAGTCATAGAGGCTGCAATGCCATGTTATAGAACCAATACTCCTAAATACTGAGCTCTTTGG GTGCAGGCCCATGAATGGTTTATATCTCTAGCCAGAATTAAATTGTCTAGCACACGTCAGTGAGTGACTGACCTGGATGACTTGTAGATTCTCACAAATG CAATGAGAAATTATTAATACTTTTGGAGGCTATGCTTATGCATCCTTGCAATAAAGTTTTCTTCAAAGCTCAAAAACTTCTATTCTTTAAAGAATGTAAT CAAACGGTAGCTAAACTTATGTTTGGCTCAAGATGTAATTTACTTTTGTGACGGTGTTGAGTTTTATTTGCTACTCAGGTAGATGAACTTCTGAAACAAA GGGATAGTATCCATTCTTCTTTCACTGTTGTCAAGTCAACGACTAGTAATTTAAGCAATGGAAGT
• Tissue: pods
• Gene name: LI_gene_185396;
• Additional information: details;

Expression of Ll_transcript_299195

FPKM

• PAB: 1.4
• PNAB: 1.4
• PS1: 1.1
• PS2: 0.7
• PS3: 1.2
• PW1: 1.5
• PW2: 1
• PW3: 1.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_299195

• Blastp: Chaperone protein dnaJ 15 from Arabidopsis with 84.64% of identity
• Blastx: Chaperone protein dnaJ 15 from Arabidopsis with 84.64% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (AT1G68370)
• CantataDB: Link to cantataDB annotations (CNT0000899)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441409.1)
• Pfam: DnaJ domain (PF00226.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;