| Id Trinity | TRINITY_DN51533_c0_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_299481 |
| Sequence | TATTATTCAATTTTGTTTTTATTTAAGAACAAAGTTAACATATAGATTCCTCTTCCAATTGGATGCGCCAAATTTATAATTAAATTTAGAATGTTGTTTA AATAGTGGAAGCAGGTGAACAAGGCAACAACCCGGCCCAATAGGAGTGAATAGACAAGAGTACCCCTTTCTCTTTCTCTCTCGTTCTCAAATCTCAATCG CAATCTTAAATTCGCGTTGTTGAGCAGAGATAGATAGGTTAGAGAGAAGATGGAACGCATCATCGGCGGCAAGTACAAACTTGGCCGCAAGATCGGAAGC GGTTCCTTCGGTGAAATCTACCTCGCTACTCATATGGATACATTCGAGATCGTTGCTATCAAGATCATTGTTTGGTGTTTCAGGAGAATGGTAAAACAAA GCATCCGCAATTGCTTTATGAGGCCAAGCTCTACAATATTCTTCAGGGAGGAAGTGGCATTCCAAGCATAAAATGGTTTGGTGTAGATGCTGAGGACAAT GCGCTTGTTATCGATTTGCTGGGTCCGAGCCTTGAGGATCTTTTTGTCTACTGTGGAAGAAAGTTCTCATTGAAGACAGTGTTGATGTTGGCTGATCAAA TGATGAATAGAATAGAATATGTGCACTCAAAAGGATTCCTACACAGAGATATAAAACCTGATAACTTTCTCATGGGACTTGGTCGGAAGGCAAACCTGGT TTATATCATTGACTTTGGGCTTGCAAAACGATATCGTGACTCCACAACCAATCGTCACATCCCTTATAGAGAGAATAAAAACTTAACAGGGACTGCACGT TATGCAAGTTGCAATACTCACCTTGGGATTGAGCAAAGCCGGCGGGATGATTTGGAGTCATTAGGTTATGTGCTTTTATACTTTCTAAGAGGAAGCCTTC CTTGGCAAGGTCTGAAGGCTGCTACAAAGAAGCAAAAGTATGATAAAATATGCGAGAAGAAAGTATCAACTCCTATTGAGGCGTTATGCAAATCTCACCC TGTAGAGTTCACTTCGTACTTTCATTACTGTCATTCTCTGACCTTTGATCAGCGGCCTGATTATGGATTCTTGAAGCGCCTATTTCGGGAACTATTTACT CGAGAAGGTTATGAATTTGATTATGTATTTGATTGGACTATCTTAAAGTATCAGCAGTCACAAAAGAACAGAGTCCAGCCTCGCATATCTCCGGTCCCTG GAGCTAGCAACAGTCGTGCAATGCCAATGGTTCTTGACAACCATCAAGGAGATGTCTCAGAGCGCATTAAGTCAGGCAATGCTACTAGTTCTGGTGTTAA AATTCAGTTTAAATCACCATTGGCTAAAAATTTGGGTTCCGAAAATCCTCTTGGCAAGAATATTTTTGGTGAAGCAGATGTACCCTCTACTTCATTTTCT CTTGCTGGTACCTCAAGAAGGAACCCCTTGAAGCCTGCCTTGTCAACTGAAGCTTCCAACCATGTACATGGGCAAGGAAGTCCCTTCAAGTAGCTCGCCT CATCTTTGCAGCACATATCATCTGCTAAAATGAATTTCCTAGATGTCACTTTTCTTGTTCAGACTTTGTGTCTGCAATCAGTTATTGACTATTTGGCCCG CTCCTTTACTTGACCAGTTATATGTTGCTCTGGATTTGATTGAGAAGACTGCAAATTCATGATGGGTTGCTTTCATCTTTTTTATGTCTATGGTCAAGAA ATGTCAAGTGATCCATTCATGTAGACTGCAAATGTGCTGCAAGGTTGATAAATTTCATAGCTCACTCATCTTTGAGACCAGGTTGTGTTGCTTTTTTTCC TCAGGTGACGATTGTTTGGTATAAAATACAGACTACCCAGGGTTGGCTCCTTTGCTGTACATAGATTTCAAAAGTGACACAGCAATCTTGTATATTCATG TTTTTATGTACAATTAATGTGTGATAATTATTTTTGTGCCATATGATAACTGGCTACAGTTTGGTTGCTAAATTGATTAACATCATTATGAATTGCAGGT CTGTTTACAGTTTTTTTTGCTAAGATATATTTTATTTCAGTTTGGCCTTCTTTGTTGTTCATATATTTTTAGCCTGTTATGTCATTTTTCCTTTCAAAAT TAGATATAGTGAACTTTTAGTTTTATTTCCCTTATATCATCTCTGGAGGCATCCATCAATGAAATTTCTTTGAATGAGGTGAAAGCCTAAGAGTTATGTG AATAGACTCGGGTCCACAATGGACCCTACAGTGGCAGCATATCTACCAGTGACTTTTATTACCTACTGATTTATAATTTGAATTTATATGTTGGATGATG GGTATGCTGTCACATGGAGGATTCATGGTGAACTAACATCACTCAAAATGCAAATTGGAAGTTTATTGTACAGAAACTGATTGCAATTAAGCAGCTCAAT TATTTGTTCACACTTTTTCTTTTGCAGGATTCTTTTTCCAAGCAGTATTGTCTGAAGGATGAAATATGATAGTCAGTTGGCATTTATATCATTGCCACTA TCAATCAGGAAATACCTCTCTGTACAGATTTGATTGCCTGCAATAGTACTTCGGGGATTGCGTTGGTTTTGTGATGAGCCTGAAACAAAAACTTCTGATA TGGAGAGAGATCTTTTGAATATAATCTTTAATTTCTATGATTCTATGCAACCTTTTGGTAAAAGAGTTTACCAATTTCTTTCTCAGCTGATTGATAGGCA TGGTTGGGTTTGATACTGGATCTGGGTAGGTTTCCCAAAGGGAAAAATATACTAAGAACCAATGCACCTGAAGGCGCCAAAGTTCCTATAGTGAACAAGA TTCCTTTATAACAGTGCTAACATGAATTATCTGCAGACCATAACAGATGGAGTGCATTGATTTTGGTGGACAGAAGCAACAAACTTGTACGCTTCGGTGA GGTATTTCGTTCGCTAGTATTGCTTACTATTTATAGTAGATGTCCCATTGTCAAGTATTCCAAACTAAGTTCTTCAGGTTTGGTATGATACACAAAGCAT GTGGAATGTTATAAATGAGATGGGGGTTCAAGATTTTGGATTCCAAGGCATTCCATTAAAACCATTGAAGTACTAAATCCGTTTGGATGGAGATGTGTTT GAATACAGGAAAGCAACATCATTGAGATTCATGTGCTAAACTGCATTTCTCGTATACCACTGACATATTGGTAGAAATTTGAAGACTCAGGAAATGATGT TCCAAATGATACCAATTTAAATTCTCAAATGCATGAATGCTCTTGGAAACATAGGGATAAAGTTCCAAGAGCATTCAAAAAAAATGGTCGTGTGAACTGG GAAGGGTCATCCAAAAAATATTATCATCCTCATCGCAAATATATTAGTTCTTATCGACCTCTTTTATTTTAATAAAAATAAAATAAAATATAGAAGCCTT TAATTTGTTGTCACCAACCTTGGTAGAGTTAACTTTCATGTTCACTTTTGTTGTCACCAACCTTGTAGAGTTAATTTGTATACACCAAAGTTAGTGTAGC CATGCTAGCCTAAGCAAATTTCAAATCCAAAAGGACTGTTTCAGCACCTCCTGTTATGAAAGAATTTTGTGGTATTATTCGAGTAAAGGCAACATGAATT TTGTGGTGCATGAAATGAATTTCGTGAAAATATGTATAGGTTTTGAGAAGGGCAATATGTTAGATAGAGGATAGGAGCGTAGATCAATCTTCAGATATAG ATATGAAGGAAAAGCCATCAGCATGGGCATGAATCCAGAACCTATTCAGCATAGAAGACTGGCATTTATTTTTCAACATCTTATTAGGTTCCTTGACCTC AATTTTGTGTATCAGATGCAGCACATGAAGTCATTATCATGGTTAAACAGTTACTGTATTACAAGCTGTCTCTAAGAAACCAATTTGAATCTCAAAATAC ATAAAAGACCATTATTCATTGAATCACATTGACTCTGCACCTGGCTTTTTCTGTATGGCTCAATTCTGATTTCTTAAAAACTAAAATATCTCTATTGTAA TGAGACTTGAGATTTGTCCTATCTGAGCTGCTGAAATGTACCAAGGCTTTAAATCCGACCTACATTAATTTTAAATACCAGTCGTTAAGAATACTAATAA AATTTGTAATGAAATATGAATGCTTGTAATTAATATTATACAAACCTTCTCTAACAATGTTC BLAST |
| Tissue | pods |
| Gene name | LI_gene_185658; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_299481
| Blastp | Casein kinase 1-like protein 3 from Arabidopsis with 70.03% of identity |
|---|---|
| Blastx | Casein kinase 1-like protein 3 from Arabidopsis with 72.99% of identity |
| Eggnog | Casein Kinase(ENOG410XPGP) |
| Kegg | Link to kegg annotations (AT4G28880) |
| CantataDB | Link to cantataDB annotations (CNT0000756) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419529.1) |
| Pfam | Protein kinase domain (PF00069.24) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |