Ll_transcript_299471

• Id Trinity: TRINITY_DN51533_c0_g1_i3
• Name Transcript: Ll_transcript_299471
• Sequence: TATTATTCAATTTTGTTTTTATTTAAGAACAAAGTTAACATATAGATTCCTCTTCCAATTGGATGCGCCAAATTTATAATTAAATTTAGAATGTTGTTTA AATAGTGGAAGCAGGTGAACAAGGCAACAACCCGGCCCAATAGGAGTGAATAGACAAGAGTACCCCTTTCTCTTTCTCTCTCGTTCTCAAATCTCAATCG CAATCTTAAATTCGCGTTGTTGAGCAGAGATAGATAGGTTAGAGAGAAGATGGAACGCATCATCGGCGGCAAGTACAAACTTGGCCGCAAGATCGGAAGC GGTTCCTTCGGTGAAATCTACCTCGCTACTCATATGGATACATTCGAGATCGTTGCTATCAAGATCGAGAATGGTAAAACAAAGCATCCGCAATTGCTTT ATGAGGCCAAGCTCTACAATATTCTTCAGGGAGGAAGTGGCATTCCAAGCATAAAATGGTTTGGTGTAGATGCTGAGGACAATGCGCTTGTTATCGATTT GCTGGGTCCGAGCCTTGAGGATCTTTTTGTCTACTGTGGAAGAAAGTTCTCATTGAAGACAGTGTTGATGTTGGCTGATCAAATGATGAATAGAATAGAA TATGTGCACTCAAAAGGATTCCTACACAGAGATATAAAACCTGATAACTTTCTCATGGGACTTGGTCGGAAGGCAAACCTGGTGAATATCCTGTTTTGTT ATTACTGTGTATTGACTGGCTTCATTTTTTTCCCACTCTTTTATTATTAACTATTAAGGTTCCATATATTTTTAATTGTGTTCTACATGTCAGGTTTATA TCATTGACTTTGGGCTTGCAAAACGATATCGTGACTCCACAACCAATCGTCACATCCCTTATAGGTTTCTAACTTTCTATTGTATTCCATTGACCTTGTT CATTCTCTTTTCTTTTTACTGCCCCTATTCTTTTAGGGTTTGATGTTTGCATCTTTTAATATTGATTTTTTCATTCACTCATTCTCTTTCCTATACTTTT TTGTGAAGTTTTCTTCCTTTCTCCATACCTTCTCCACTGATTCCCTGGAAATACCCCAAAACTAATGACAAATTTTACTGCACAGAGAGAATAAAAACTT AACAGGGACTGCACGTTATGCAAGTTGCAATACTCACCTTGGGATTGAGCAAAGCCGGCGGGATGATTTGGAGTCATTAGGTTATGTGCTTTTATACTTT CTAAGAGGAAGCCTTCCTTGGCAAGGTCTGAAGGCTGCTACAAAGAAGCAAAAGTATGATAAAATATGCGAGAAGAAAGTATCAACTCCTATTGAGGCGT TATGCAAATCTCACCCTGTAGAGTTCACTTCGTACTTTCATTACTGTCATTCTCTGACCTTTGATCAGCGGCCTGATTATGGATTCTTGAAGCGCCTATT TCGGGAACTATTTACTCGAGAAGGTTATGAATTTGATTATGTATTTGATTGGACTATCTTAAAGTATCAGCAGTCACAAAAGAACAGAGTCCAGCCTCGC ATATCTCCGGTCCCTGGAGCTAGCAACAGTCGTGCAATGCCAATGGTTCTTGACAACCATCAAGGAGATGTCTCAGAGCGCATTAAGTCAGGCAATGCTA CTAGTTCTGGTGTTAAAATTCAGTTTAAATCACCATTGGCTAAAAATTTGGGTTCCGAAAATCCTCTTGGCAAGAATATTTTTGGTGAAGCAGATGTACC CTCTACTTCATTTTCTCTTGCTGGTACCTCAAGAAGGAACCCCTTGAAGCCTGCCTTGTCAACTGAAGCTTCCAACCATGTACATGGGCAAGGAAGTCCC TTCAAGTAGCTCGCCTCATCTTTGCAGCACATATCATCTGCTAAAATGAATTTCCTAGATGTCACTTTTCTTGTTCAGACTTTGTGTCTGCAATCAGTTA TTGACTATTTGGCCCGCTCCTTTACTTGACCAGTTATATGTTGCTCTGGATTTGATTGAGAAGACTGCAAATTCATGATGGGTTGCTTTCATCTTTTTTA TGTCTATGGTCAAGAAATGTCAAGTGATCCATTCATGTAGACTGCAAATGTGCTGCAAGGTTGATAAATTTCATAGCTCACTCATCTTTGAGACCAGGTT GTGTTGCTTTTTTTCCTCAGGTGACGATTGTTTGGTATAAAATACAGACTACCCAGGGTTGGCTCCTTTGCTGTACATAGATTTCAAAAGTGACACAGCA ATCTTGTATATTCATGTTTTTATGTACAATTAATGTGTGATAATTATTTTTGTGCCATATGATAACTGGCTACAGTTTGGTTGCTAAATTGATTAACATC ATTATGAATTGCAGGTCTGTTTACAGTTTTTTTTGCTAAGATATATTTTATTTCAGTTTGGCCTTCTTTGTTGTTCATATATTTTTAGCCTGTTATGTCA TTTTTCCTTTCAAAATTAGATATAGTGAACTTTTAGTTTTATTTCCCTTATATCATCTCTGGAGGCATCCATCAATGAAATTTCTTTGAATGAGGTGAAA GCCTAAGAGTTATGTGAATAGACTCGGGTCCACAATGGACCCTACAGTGGCAGCATATCTACCAGTGACTTTTATTACCTACTGATTTATAATTTGAATT TATATGTTGGATGATGGGTATGCTGTCACATGGAGGATTCATGGTGAACTAACATCACTCAAAATGCAAATTGGAAGTTTATTGTACAGAAACTGATTGC AATTAAGCAGCTCAATTATTTGTTCACACTTTTTCTTTTGCAGGATTCTTTTTCCAAGCAGTATTGTCTGAAGGATGAAATATGATAGTCAGTTGGCATT TATATCATTGCCACTATCAATCAGGAAATACCTCTCTGTACAGATTTGATTGCCTGCAATAGTACTTCGGGGATTGCGTTGGTTTTGTGATGAGCCTGAA ACAAAAACTTCTGATATGGAGAGAGATCTTTTGAATATAATCTTTAATTTCTATGATTCTATGCAACCTTTTGGTAAAAGAGTTTACCAATTTCTTTCTC AGCTGATTGATAGGCATGGTTGGGTTTGATACTGGATCTGGGTAGGTTTCCCAAAGGGAAAAATATACTAAGAACCAATGCACCTGAAGGCGCCAAAGTT CCTATAGTGAACAAGATTCCTTTATAACAGTGCTAACATGAATTATCTGCAGACCATAACAGATGGAGTGCATTGATTTTGGTGGACAGAAGCAACAAAC TTGTACGCTTCGGTGAGGTATTTCGTTCGCTAGTATTGCTTACTATTTATAGTAGATGTCCCATTGTCAAGTATTCCAAACTAAGTTCTTCAGGTTTGGT ATGATACACAAAGCATGTGGAATGTTATAAATGAGATGGGGGTTCAAGATTTTGGATTCCAAGGCATTCCATTAAAACCATTGAAGTACTAAATCCGTTT GGATGGAGATGTGTTTGAATACAGGAAAGCAACATCATTGAGATTCATGTGCTAAACTGCATTTCTCGTATACCACTGACATATTGGTAGAAATTTGAAG ACTCAGGAAATGATGTTCCAAATGATACCAATTTAAATTCTCAAATGCATGAATGCTCTTGGAAACATAGGGATAAAGTTCCAAGAGCATTCAAAAAAAA TGGTCGTGTGAACTGGGAAGGGTCATCCAAAAAATATTATCATCCTCATCGCAAATATATTAGTTCTTATCGACCTCTTTTATTTTAATAAAAATAAAAT AAAATATAGAAGCCTTTAATTTGTTGTCACCAACCTTGGTAGAGTTAACTTTCATGTTCACTTTTGTTGTCACCAACCTTGTAGAGTTAATTTGTATACA CCAAAGTTAGTGTAGCCATGCTAGCCTAAGCAAATTTCAAATCCAAAAGGACTGTTTCAGCACCTCCTGTTATGAAAGAATTTTGTGGTATTATTCGAGT AAAGGCAACATGAATTTTGTGGTGCATGAAATGAATTTCGTGAAAATATGTATAGGTTTTGAGAAGGGCAATATGTTAGATAGAGGATAGGAGCGTAGAT CAATCTTCAGATATAGATATGAAGGAAAAGCCATCAGCATGGGCATGAATCCAGAACCTATTCAGCATAGAAGACTGGCATTTATTTTTCAACATCTTAT TAGGTTCCTTGACCTCAATTTTGTGTATCAGATGCAGCACATGAAGTCATTATCATGGTTAAACAGTTACTGTATTACAAGCTGTCTCTAAGAAACCAAT TTGAATCTCAAAATACATAAAAGACCATTATTCATTGAATCACATTGACTCTGCACCTGGCTTTTTCTGTATGGCTCAATTCTGATTTCTTAAAAACTAA AATATCTCTATTGTAATGAGACTTGAGATTTGTCCTATCTGAGCTGCTGAAATGTACCAAGGCTTTAAATCCGACCTACATTAATTTTAAATACCAGTCG TTAAGAATACTAATAAAATTTGTAATGAAATATGAATGCTTGTAATTAATATTATACAAACCTTCTCTAACAATGTTC
• Tissue: pods
• Gene name: LI_gene_185658;
• Additional information: details;

Expression of Ll_transcript_299471

FPKM

• PAB: 0.2
• PNAB: 0.2
• PS1: 0.3
• PS2: 0.1
• PS3: 0
• PW1: 0
• PW2: 0.4
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_299471

• Blastp: Casein kinase 1-like protein 3 from Arabidopsis with 87.59% of identity
• Blastx: Casein kinase 1-like protein 3 from Arabidopsis with 65.59% of identity
• Eggnog: Casein Kinase(ENOG410XPGP)
• Kegg: Link to kegg annotations (AT4G28880)
• CantataDB: Link to cantataDB annotations (CNT0000756)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419529.1)
• Pfam: Protein kinase domain (PF00069.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;