Ll_transcript_299474

• Id Trinity: TRINITY_DN51533_c0_g1_i6
• Name Transcript: Ll_transcript_299474
• Sequence: AAGGGAATAAAATATTTCCTTACACCCAAAAATGTGCTTAAATTCATTTGTTATTTGACACATGTTAAATAGGAGATAAATTATTTCCTTGTGCATGTTG CTCATTAAATTATATGCTCATTAAATTATTGTTTGGAGTTGAATGTTGTGAAGGTTTGGAAAGAAGTGAAGAGACAAGAGTATCCCTATCTCCTTTGTGA AATCTCCAAAGTGTTGGAAACAGATAGGTTAGGTTTATCAAATGGATCGCATCATCGGCGCCAAGTACAAGCTCGGCCGCAAGATCGGAAGCGGATCCTT CGGTGAAATCTACCTCGCCACTCATATGGATACCTTCGAGATTGTAGCTATTAAGATCGAGAACGGTAAAACGAAGCATCCTCAATTGCTTTATGAGGCC AAGCTCTACAATATTCTTCAAGGAGGAAGTGGCATTCCAAGCATAAAATGGTTTGGTGTAGATGCTGAGGACAATGCGCTTGTTATCGATTTACTTGGTC CCAGCCTTGAGGATCTTTTCGTTTACTGTGGAAGAAAGTTCTCATTGAAGACCGTGTTGATGTTGGCCGATCAGATGATGAATAGAATAGAATATGTGCA CTCGAAAGGATTCCTGCACAGAGATATAAAACCTGATAACTTTCTCATGGGACTCGGTCGGAAGGCAAACCTGGTTTATATCATTGACTTTGGGCTTGCA AAACGATATCGGGACTCCGCAACCAATCGCCACATTCCTTACAGGGAGAACAAGAATTTAACAGGGACTGCACGTTATGCAAGTTGCAATACTCATCTTG GGATTGAGCAAAGCCGACGGGATGATTTGGAGTCATTAGGATATGTGCTTTTATACTTCCTCAGAGGAAGCCTTCCTTGGCAAGGTCTGAAGGCTGCAAC AAAGAAACAAAAGTATGATAAAATATGTGAGAAGAAAGTATCAACTCCTATTGAGGTGTTATGCAAATCTCACCCTGTAGAGTTCGCTTCATACTTTCAT TACTGTCACTCTCTGATCTTTGATCAGCGACCTGATTATGGATTCTTGAAGCGCCTATTTCGGGACCTATTTACTCGTGAAGGTTATTATTGTTCATTTT TTAGTAAATTTGAATAAAATAAATTGCAGAATTTTGTAGAAGGAATGGGCAAAATGGCCTAAAAACATAAGAAAAGTAGCAATGTCGAATTATGTTGATT TTATTGACATACACATTTTTCATTATGCCAAATTATATTCCATTGTGGTGAAAGTAGCAATGTCTGTGTTTTTCTCTCTACAGTCTACACTTAACTGTAA CTTCCCTTTCTGTTCTTTCCTTATTGGTGTATGACAGGTTATGAATTTGATTATGTATTTGATTGGACTATCTTAAAGTATCAGCAGTCACAAAAGAATA GAGTCCAGCCACGCATATCTCCTGTCCCTGGAGCTAGCAACAATCATGCAATGCCAATGGATCTTGACAACCATCGAGGGGACGTCTCAGGGCGCATTAG GTCTAGCAATGCTACTGGTTCTGGTGTTAAAATTCAGTTTAAGTCATCCGTGGGTAAAAATTTGGGTTCTGAAAATCCTCTTGGCAAGAATATTTTTGGT GAAGCGAATGTACCCTCTACTTCATTTTCTCTTGCTGGTACCTCAAGAAGGACCTCCTTGAAGCCCACCATGCCAACTGAAGCTGCCAACCATGTACATG GGCAAGGAAGTCCCTTCAAGTAGCCCAATTCCATCTCTGCAGCGCATATTATCTGCCTAACGAATTTCCTATATGGCACTTTTCATGTTCAGACTGTATG TGCCTGCAATGAGTTATTGGCTATTTGCAGCACTCCTACCTATCCTTGACCAGTTATATTATGCTGTATTTCCAACTGTGGATCAGATTGAGAAGACTTC AAATTCATCATGGATTGCTTGCACCCTTTTTATATGTTTATGGTCAAGAAATTTCAACTGATATGGAGGCTGAAAATGTGCTGCAAGGTTGATAAATTTC ATAGCTCATCTGAGACCAGCTTGTGTTGCTTTTTTTTCCTCAGGTGACGATTGTTTGGTATAAAATACAGACTACCCAGGGTTGGCTCCTTTGCTGTACA TAGATTTCAAAAGTGACACAGCAATCTTGTATATTCATGTTTTTATGTACAATTAATGTGTGATAATTATTTTTGTGCCATATGATAACTGGCTACAGTT TGGTTGCTAAATTGATTAACATCATTATGAATTGCAGGTCTGTTTACAGTTTTTTTTGCTAAGATATATTTTATTTCAGTTTGGCCTTCTTTGTTGTTCA TATATTTTTAGCCTGTTATGTCATTTTTCCTTTCAAAATTAGATATAGTGAACTTTTAGTTTTATTTCCCTTATATCATCTCTGGAGGCATCCATCAATG AAATTTCTTTGAATGAGGTGAAAGCCTAAGAGTTATGTGAATAGACTCGGGTCCACAATGGACCCTACAGTGGCAGCATATCTACCAGTGACTTTTATTA CCTACTGATTTATAATTTGAATTTATATGTTGGATGATGGGTATGCTGTCACATGGAGGATTCATGGTGAACTAACATCACTCAAAATGCAAATTGGAAG TTTATTGTACAGAAACTGATTGCAATTAAGCAGCTCAATTATTTGTTCACACTTTTTCTTTTGCAGGATTCTTTTTCCAAGCAGTATTGTCTGAAGGATG AAATATGATAGTCAGTTGGCATTTATATCATTGCCACTATCAATCAGGAAATACCTCTCTGTACAGATTTGATTGCCTGCAATAGTACTTCGGGGATTGC GTTGGTTTTGTGATGAGCCTGAAACAAAAACTTCTGATATGGAGAGAGATCTTTTGAATATAATCTTTAATTTCTATGATTCTATGCAACCTTTTGGTAA AAGAGTTTACCAATTTCTTTCTCAGCTGATTGATAGGCATGGTTGGGTTTGATACTGGATCTGGGTAGGTTTCCCAAAGGGAAAAATATACTAAGAACCA ATGCACCTGAAGGCGCCAAAGTTCCTATAGTGAACAAGATTCCTTTATAACAGTGCTAACATGAATTATCTGCAGACCATAACAGATGGAGTGCATTGAT TTTGGTGGACAGAAGCAACAAACTTGTACGCTTCGGTGAGGTATTTCGTTCGCTAGTATTGCTTACTATTTATAGTAGATGTCCCATTGTCAAGTATTCC AAACTAAGTTCTTCAGGTTTGGTATGATACACAAAGCATGTGGAATGTTATAAATGAGATGGGGGTTCAAGATTTTGGATTCCAAGGCATTCCATTAAAA CCATTGAAGTACTAAATCCGTTTGGATGGAGATGTGTTTGAATACAGGAAAGCAACATCATTGAGATTCATGTGCTAAACTGCATTTCTCGTATACCACT GACATATTGGTAGAAATTTGAAGACTCAGGAAATGATGTTCCAAATGATACCAATTTAAATTCTCAAATGCATGAATGCTCTTGGAAACATAGGGATAAA GTTCCAAGAGCATTCAAAAAAAATGGTCGTGTGAACTGGGAAGGGTCATCCAAAAAATATTATCATCCTCATCGCAAATATATTAGTTCTTATCGACCTC TTTTATTTTAATAAAAATAAAATAAAATATAGAAGCCTTTAATTTGTTGTCACCAACCTTGGTAGAGTTAACTTTCATGTTCACTTTTGTTGTCACCAAC CTTGTAGAGTTAATTTGTATACACCAAAGTTAGTGTAGCCATGCTAGCCTAAGCAAATTTCAAATCCAAAAGGACTGTTTCAGCACCTCCTGTTATGAAA GAATTTTGTGGTATTATTCGAGTAAAGGCAACATGAATTTTGTGGTGCATGAAATGAATTTCGTGAAAATATGTATAGGTTTTGAGAAGGGCAATATGT
• Tissue: pods
• Gene name: LI_gene_185658;
• Additional information: details;

Expression of Ll_transcript_299474

FPKM

• PAB: 0.4
• PNAB: 0.2
• PS1: 0
• PS2: 0.1
• PS3: 0.4
• PW1: 0.2
• PW2: 0.3
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_299474

• Blastp: Casein kinase 1-like protein 3 from Arabidopsis with 49.56% of identity
• Blastx: Casein kinase 1-like protein 3 from Arabidopsis with 89.36% of identity
• Eggnog: Casein Kinase(ENOG410XPGP)
• Kegg: Link to kegg annotations (AT4G28880)
• CantataDB: Link to cantataDB annotations (CNT0000756)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019436617.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;