| Id Trinity | TRINITY_DN51557_c3_g3_i2 |
|---|---|
| Name Transcript | Ll_transcript_300232 |
| Sequence | CAACAACTTGGCATCTCGTGAGTGAGTGATATCGGAGAAGGCGAAAATGTTCCTACGTGCGGTGGCGCGGCCATTGATGGCCAGGGTGAAGCAAACAACC GGGATCGTGGGTCTAGACGTGGTGCCGAATGCGAGGGAGGTGCTGATCGGACTCTACAGCAAGACTCTGAATGAGATCAAGGCGGTGCCGGAGGACGAAG GGTATCGTAAGGCGGTGGAGAGTTTCACGAGTCATAGATTGAAGGTTTGCCAAGAGGAAGAAGATTGGGAGGATATTGAGAAGAAACTCGGTTGTGGACA GGTTGAGGAGCTTATCGAAGAAGCACAGGATGAGCTTAAACTCATTTCCCTCATGAATGAGTGGAAACCATGGGGTGTCCCAGATGATTATGAATGTGAG GTGATCGAGAATGATGCGCCAGTTCCCAAGCATGTTCCGCTTCATCGTCCTCCTCCTCTCCCTACAGAGTTTCACAAAACACTAGAGTCACTTCAATCAG GAAAAGATACTGCTGCTATCAGTTCTGGTGAATCTAAGGCATGATCTGAAGGTTTCTATATTTGAATGTGCTTTTCCTTTTCTTTGCATTAAATTGTTTG TCTTAGATAGTTTCAGACTAAACAAACTTTGTGGGAGAAAATATTGGCTCCTTAATAACTTGAACAGGAAAAGATACTCTTGCTGTCTGCTCTGGATTCA AAGGCATGCTCTGAAGCCACATAAGAGCATTGGTTTATATATTTGAATGGAATAGATGAAAAGAAGGATGATATTTGAGGTTATATGATCTCATCTATTT TCTCAGGACATTGAGCTACAAATACTTAAACTAAAGGAAGTAACTATACTGTCAACAAACTGGAAATTTTTTGATAGAAGGTAGAGATGGGAATTATGTC CAAGCATGAATCAAATCAAATCATTGGCACACTGTTCACATCTTTAAATGGTTAATATGTTTATGAAAATTGGCTAGATGGGAAGATTCCTGTTAAATAT TCAATTTCCATCACAGCTCTATGCTCTGCACATGAAATCAAACTCTTTAAAGTGTCTCGGGTTTGAGTCTTGTGGATGAAAAAATGATCGTTGGTAGAGT TAAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_185884; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_300232
| Blastp | Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial from Arabidopsis with 81.88% of identity |
|---|---|
| Blastx | Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial from Arabidopsis with 79.35% of identity |
| Eggnog | NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex(ENOG4111V89) |
| Kegg | Link to kegg annotations (AT5G52840) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453867.1) |
| Pfam | ETC complex I subunit conserved region (PF04716.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |