Ll_transcript_299975

• Id Trinity: TRINITY_DN51588_c4_g1_i3
• Name Transcript: Ll_transcript_299975
• Sequence: CAGCTGACTGTGTCAGAATTTTACTCCTCAACAAGCAACTCTCACACAGTCACACTCCCTTCAACCTCAAAGCCACTGTACCAAAACCATTCCCCACGAT CTCTCCATTTTTTCGTTTCTAAATTAAACATAACTGCTCCGTCGCTAAATATTTCTTTATTTTTCATGCTCGCTTCGGACCCTACCTCTTTGCTTCGGCC CAAAGCTTCACTACCCGATCCAAACCCGACCCGATCACTCTTCACTGCCCGTTTCTGCTTCGGTCCACGATCTTGGTCCAGACCTAGCTTCACGGTGGGG CCCAAGTTTTCCGTTAATTCGGTCGAAATGGAATTGCTCCGCCGAATTGGCCGCGGTTGCTTCAGGAACCCCCGCCTCAAGGTGGAGGCCAACATCGGCG GCGAGGACTTTTTCGATGCTACCGCCGCCATGGCGAAGCCGGTTCCTTCTCACCTTGTTATTATGGTCAATGGTATAATTGGGAGTGCTTCGGATTGGAG ATATGCTGCAGAGCAGTTTGTGAAGAAGCTTCCAGATAAAGTTGTTGTACACCGCAGTGAATGCAATTCTTCAAAATTGACGTTTGATGGTGTTGATACG ATCGGTGAGAGGCTAGCTGAAGAGGTTCTATCTGTTATTAGACGATGGCCAGAGGTGCAGAAGATATCCTTTGTGGCACATTCTCTAGGAGGCTTGGTGG CTAGATACGCTATTGGGAGACTTTATGAGTATTCTTCTACACTGGAACCGTTAGGTACACGCAGAAACTGCTCCAGTGAAGAGAAGACAGAATATTCAAA GGATTTCCTTGAACAGTGTAATGAAGCCAAGATTGCTGGCTTAGAGCCAATGAACTTCATAACATTTGCAACACCACATCTTGGTTCAAGGGGAAATAAA CAGCTTCCGTTTCTTTGTGGTCTTCCTTTCCTTGAGAGAAGTGCATCCCAAACTGCCCATCTAGTTGCAGGGAGAACTGGGAAGCATCTCTTCCTCATGG ACAATGATGATGGAAAGCCTCCTCTGCTCTTGCAAATGGTTGACGACTCTGACAAATTGAAATTTATATCAGCTCTACGTGCGTTCAGTCGGGTGGCATA TGCAAATGCAAATTATGATTATATGGTTGGTTGGCGTACCTCATCAATTCGTCGTCAGCATGAACTTCCAAAGTCCAATCTTCTCGTAATTGACGAGACA TACTCACGCATTGTTTATATTGAAGGAGAAACTGCAGATGATATTCGCAATAAATCATCTTCTAATGTTGGAGTCGAAACAGTTGACTTAGAAGAGGATA TGATAAGGGGTCTCACTCAGGTACCTTGGGAGCATGTAGATGTTAGCTTTCATAAAAGTAAACAGAGGTTAATTGCTCACAGTACAATTCAGGTAACCTT GATATCCTAAACCTTTCCTGTAAATTACTTGTTATGCGTTCTTTTTATTCTGTATTATCGACTGCATTTTTTCATTCTACCTACATTTAGTACTTCAATA TTTAGATTAAAATATAAAAAAGGAGTGCATAGTACATTATATTATTTGAAGATAATGTGTTTTTGTAACATTGATGATGGCAATGATATAAGAGAGAAAG GAGGAAAGCTAGGATATGAGATTTAGGAGAGATCAAGCGAGGAATTAAGTACTTAAGTTTTAGTAAAAGGTACTTATTCTTTTTCACATGATAGGATGCT GATTAAGAAAGTGAAACTAGATATTCTTTTGGCTCAGTGAATGGCCAGTGAAACTAGGATTTAATGAAGGATTTGAGTCAAATGTTGATAAATATTTATG ATATTTTTGTTGGACGAAGAGAAAGAAGTACAACATATTGGTGGATGACAAATCCTCAACAAAGATAAAACACAAAAAATGAAGAAAAAAGATAAAGGAA ACTCCTCAAAACTACTTAGTTTAGGAGAGATTCTAGTCCCTTTGTAAATCAAATCTTAAAATACTGATACTCTTGAAGACTGAAGAGACCATGTGCTTAA AGCTGGCAATGAACAGCTTTGTCAATTGAGAAATAGATGAGGCACAGTTTCAGAGCATTACCTTGGGAAATGATCTCCCGCGTAAAATGATATATGACGC CTATGTGTGGTTCTTTCGTGATACATTTGATTTTTGGTCAAATGTATGGCACTTCGTCTATCAAAGTAAACTATATAGTAATATCCGGTTCCAAACCCAC ACTGCCTAGCAAACTTCTAAGCCTGACAGCTTCCTTCACTGCTTCAAATGCTGCCATGTATTTGGTTTCTATAGCAGATAATGCACTATTAGATTGTAAA GTTGCTTTCCAACTAATTGCAGTACCTGAAAGTGTGAAGACGTAACCCTTCGGAGATCTTCTGTCATCAACATCGTTAGCATAATGAAAGTCAACATAAC CAATAATACTACCACTAGTATTATGACTCCTGTCATATACCGAGCCAGTATCTGTAGTACCTCGAAGATATTGATGTATCCATTTCACAGCTTGCCAATG AATCTTTCCATGACACCCCATATATCTGCTAATGACACTAACGGCATGTGAAATTTCTAGATGAGTGCTAACCATAGCATACGTAATGCTTTCAACCACA CTAGCATAAGGAACATGTGACATTTGCTCTCCCTCTTCAACATACTGTGGTGACATTGCAGCTGATAGTCTAAAATGGGATGCCAATGTAGTATTCACAG ACTTTGCATTCTGCATTGCGAAGAGCTTCAATACTTTTTCGATATACTTTCTTCTGAGACAAGTACAATTTGCCAGCATACCAATGTCCGTGAACTTCCA TGCCTGAATTTTTCTTAGCTGCACCCAAACCTTTTATCTCAATTTCACCACTAAGCTGAGTATTTAGCTTCTTGATTTCAGACACACTCGCAGCAGCAAT AAGAATGTCATCAACATAGAGCAATAAGGAAACAAACGAACCATTAGGGATCTTCTTGTGGTAGACAAAACTGTCATAATCACTTCTTGTGTAACCATGA CTCAACATGAAAGTGTCAAATTTTTATACCATGAAGAGGAGATTGCTCCAAACCTTACAATGATTTCTTCGAAGACTAACATGGTCTTCCTTGCCATCAA CTACGAAACCTTGTGGTTGCTGCATACAAATCTGCTCCTCAAGCTTGCTATGAAGAAAATCTGTTGTTACATCGAGCTGTTCAAGCTCTAGATCAAACAA TGCAATCATGGCAAGTACTACCCGAATGGAGCTGTGTACTACCCGGATGGAGCTGTGTTTCACAACAGGAGAGAATAATTCGTTGAAGTCTATTCCTTCC CTTTGGCCGAAACCTTTAGCAACTAATTGTGGTTTGTGTCTAGCCAATTCTGCTCCATGGGATCCCTCTTTTTCCTGAACACACGTTTGAAACCTACGAT CTTTTGTCCTTTGGGCAGTTTCACAAACTCCCAAGTCTGGTTCTTGTTAAGAGACTCCACCTTTTCACGCATAGCAACAATCCCATCCGCAGGCTCTTTA CCCAAGATATCCTCATAGTATATTACATGGTCTTGAGTTTCAATATCCTCTGCGATCCATACTGCAAAAGAGACTATGTTTGCATGGACAAATCACTTAG GATGAATTATTTGCCTTTTTTTTTCTCTATTTCTTGGAATACTATATTCTTGCTGCTCTTGTGGAATCTCCTCTTGCTCTTCAACAATTTCTTGTGATTC TTTGCATCATCGTCACCGCCACCACCATTGACCTCGTCGTCACAATCACCACCCCTGCATCCCCCATTACCATCGTCAATCTAGGAATTAAGTTTAGAAT TATAATTTTGTGCCCTGATTCTTTGCACAACTCAAATATAAAATCTCGGATTTTGAGCTTATCTGATTATGTCAAAGTTGGAGTTGAAATTAAAATTCAA AACTAATTTTTTTAATTCAATCATCCAAAATAACAGAGAGAAAAGGGAGTCGTAAAGAAATCTGTATGTCTCATATACATGAGGCTTGTTTTTATAGAGC TTATTTAATAAATACAAAAAAATATTTACATAATTGTATGATGATTTTTCTAGCTTATACAATATATCTAGATATTATTTACAGTTTCAAATACACCCTT AAACTTGGAACATATGGACATGGGCACCAAGTTTGTGACAAATATACTTAAATCTGAAATAATAATCATATGATGTTGGAAGCAATTAAAAAACAATTTA TGGCACCGAAAGAATTCTGTCCGAGTTGTGGACTAGGTCGTTCTCTTTTAGATGTTTTGAAGTATTGTCAAAAATTGTGCAAGCAGACTATTAACCATGA TGTCCTCAAGATAAAACAACTCAACTCACTATATCAAACACCAACTACATTGTGGGAACCATTCTAAAATTGCACCCTCAACCACAAATATGGCTAATGC CATTATGTTGCTAACCTAAAATACCATGAAAAGAAAGAGAAAGATGGAGGCCGAAATTGCTTTTGCAGAGAATTGGAGGGAGGAAGAAACTAAGGAAGTG TGCCTCAACTGGTGTGCGATTTTGAAATGAGAGAACCGCTATTTATAGGTTGAGATTCTAAACGGCTGAAAACTGGTATTGCTTCTGAGCTGGTCGGACA GGGCGAGCCCACGCCTATGGTGGTCATGTGGTGTGGGTCCTCCTCCACCACAAAAACGTTTTACCCTTTAGGGCACATCTCAAGTAGCATATCTCTTATT ATAAACACTCTTTAAGTAATTTCTCTACACAATGTGTGCCTTCTCCTTTTCATTTTATAAACAAAAAAACCATCAGTTGATAATATCTAGATTTATTCTA ATTGTCCATTTACAATATTATTACACAAATATATCCAGAGAATAGGGAACAATAGTTTTCATTGAATGAGTTATGGATCCAGATCCTAATCAAATGAAAT AAAGCATGAAAATATTGGACAACTGATCATTTGAATTGACAAAGCCATTGGCGATGTCTCCAAATATTATCTCCTCTAATACAATCTATGTCCCACCATG GTTGGTCCTCATGGGGCAATATGCAATGGACATGGAGTCTTCCTACACATATTTGATTGAAGAGACCAACGAGTGTTGGTTCAAGTGATACATGTTTGAT TCCCCTTAAGTAAGATCTCGAGTTCGAGCCTTGTGGATGAAAAAAATGCACGTTGAGAGAGTTAGCCTCACATACCTATGGATGTTCCCGACTCGGACAG GATTGCCTCAAGTGCGATGAT
• Tissue: pods
• Gene name: LI_gene_186105;
• Additional information: details;

Expression of Ll_transcript_299975

FPKM

• PAB: 0
• PNAB: 0.5
• PS1: 0.1
• PS2: 0.7
• PS3: 0
• PW1: 0
• PW2: 0.1
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_299975

• Blastp: Putative lipase C4A8.10 from Schizosaccharomyces with 27.76% of identity
• Blastx: Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 43.04% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (SPAC4A8.10)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417721.1)
• Pfam: Putative serine esterase (DUF676) (PF05057.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;