Ll_transcript_298096

• Id Trinity: TRINITY_DN51598_c1_g1_i9
• Name Transcript: Ll_transcript_298096
• Sequence: GTCTCACTTTCTCTCTCTATCAAACATTCATCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTAGAAACAGTAGAAGTAGGTGAAAAGCAAAGAACCCTT GTCTTCTGATTATTATTATTTTCACATTCACTTTCATCTTTTCTCTTCCATCCAATCCAATCGGTAACTGCATCAAAATCGCTCAGAAAGTGACACAATT TTTTCAAAAATAGGAAAACCCAGAATAGAAGGACTTGCCCTTGTTGTGTTTTGTTTGAGGATAGAATCAAGTTCGGATTTTGATTCACCCCGTTCAACCC CAAGTGTTTAAAGTTTGTTGCTTTTGTGGGTCAGATCTTAGGGATTCATTCTTGTCTTTGAAGCTCTTATTAGTGTGTGGATCTCTCTCATGGTTTGAGT CAATGGAGAAATGGGATTGATTTTGTGGGGTTTGAAATGTGAGTGAGTTTTGTTCAATTTTAGTTTTTTTTTGCGTGTTTTGATTTAAAGTAAGTGAGAG TGGCAAATGGCAATGGTGGCTCTTTAGTCTTCAGTGATAAGCTCCGTGTGTGGAAAATGTCAGCTTCTATAGCAGCTTTCGAGCGACCTCGACCCGGGGC TTCTAATACGGTTTTCAAAAGTGGTCCACTTTTCATATCATCTAAAGGGATAGGATGGAAGTCTTGGAAAAAGCGGTGGTTTATACTGACACGCACATCG TTGGTTTTTTTCAAAAATGACCCTAGTGCCCTTCCACAGAGAGGTGGTGAAGTAAACCTGACATTGGGTGGTATTGACTTAAATAATTCAGGGAGCGTTG TTGTTAGAGAAGACAAAAAACTGCTTACGGTATTATTCCCGGATGGACGTGATGGGCGTGCATTTACTCTTAAGGCTGAGACATCAGAAGACTTGTTCGA ATGGAAGACATCTCTGGAACAAGCCCTTACACAAGCACCAAGTGCTGCCCTTGTTATGGGACATAATGGGATTTTTCGGAATGACACAAGTGATTCTATT GAAGGGTCTTTCCATCAATGGAGGGACAAACGTCCAGTTAAGTCTTTGGTTGTTGGAAGACCAATTCTATTAGCACTGGAAGACATTGATGGTGGTCCAT CTTTCCTTGAAAAAGCTCTTCGGTTTCTAGAAAAATATGGGACTAAAGTTGAAGGAATTCTGCGGCAGTCTGCAGATGTTGAGGAAGTAGATCGGAGAGT TCAAGAATACGAGCAAGGGAAGTCTGAATTTCCTTCTGGCGAGGATGCCCATGTTGTTGGTGACTGTGTCAAGCATGTTCTCAGGGAGCTTCCCTCATCT CCAGTTCCAGCTTCTTGCTGTACTGCTTTGCTGGAGGCTTACAAAATTGATCGCAAGGAAGCTAGACTTAATGCAATGCGCTGTGCTATAGCAGAGACCT TTCCAGAGCCAAACCGACGTTTGTTACAGAGAATTCTGAAGATGATGCACACAATTGCTTCTCATTCTCATGAGAATCGGATGACTCCATCTGCTGTTGC TGCTTGCATGGCACCCTTGCTCTTACGGCCTCTACTAGCAGGAGAATGTGAACTGGAGGATGAATTTGATGTTGGTGGTGATAATTCAGCTCAGCTTCTT GCTGCTGCTAATGCTGCTAATAATGCTCAAGCAATTATTACTAATTTGTTGGAGGAGTATGAGAATATATTCGATGAAGAAAATATACAGAGATGTTCCA TGTCAGCAGATTCACGGGTTGAAAACAGCGGAACTGAAGATTCGACTGATGATGATAATATAGACGTGAAAGAAAATGGTGCTCACGATGCAGAGAATGA TGTTGGTCCAGAGACAGATGATGATGCTGAACGTGTACACAGTGGAAAATTGAGTGAAAGTAGTGGTTATGCGGGAAGCGATCTTTATGATTACAAGGCA TTTGGAGGCGATGATTCTGATATTGGATCCTCTACTGGTATCCACATGAAGACTGAAAATAAAAATCGAAATGCTGATCCGGTTACCCCATCGCCTGTGG ACCAAAACAAACAAAGAAATGGTAATGAGAACTCAGTTAATGAGAAGGATACTCCAAATTTGTTCCCTTCCACTGAATCCTATCGTTCTATGGGTGAGAT TTTATCTTCTATGGACTCTGGAAACCATTTACCCGTGCTTGGGATTGAATCAGGTTCTGCAAAGCAAACTGTTAAAGCTAGTAGCAGTAGTTTCAGTTCT AAACGGTCAACATTCTGGGGAAGGAGCAATCCGAGGAAGACACCGTCAGTGGAATCTGTTGATTCTTCTGGAGAAGAGGAGCTTTCTATCCAGAGGCTAG AGATTGCAAAAAATGATTTGCAACACAGAATTGCGAAGGAGGCTAGAGGCAATGCAATTTTACAAGCAAGCTTAGAGAGACGGAAGCAAGCTTTGCATGA GCGGCGTTTGGCGCTTGAACAAGATGTTTCAAGATTGCAAGAACAGTTGCAATCTGAGAGGGATCTTCGAGCTGCACTGGAAGTTGGTTTGAGCATGTCT TCGGGACAGTTTTCCAGTTCGCGTGGCATGGATTCTAAGACAAAGGCTGAGCTGGAGGAGATTGCACTTGCTGAAGCTGATGTGGCCAGATTGAAGCAGA AAGTTGCGGAACTTCACCATCAACTTAATCAGCAACGACAACATCACTTTGGTTCACTTGCTGACGTGGGTGATCGATACCAACAGACCCAAAATCACCC TCAGCAAAGATTTCTTCAGCAAGATTTTGATTCAACGCTTGCCTTCGTCAATCATGAAAGGAAACAAAGGACTGAGGAGAGTTTGTTGAGCACAGATTGG AGAAATATCAAAGGACAAGTATTGGCAGGCAGTAACGGGAGTAGGCAGCCTTCTCGGAAGCAATTCATGGACTCCAGTCCCAGTGATTCAAAAAGCACCG AGGCATCAACAAACATATCCGTTGATGAGCTTGGTGCTGTTGATTCTGGCTCAGTTCCCTCCACCTCAAGGGCAGCAGAGGTGATAGAGTATGGAAGACA TCCATCTGTAGCATCTTCAACATTAGTAGAGTTAACTACCCGTCTCGATTTTTTCAAGGAAAGGCGTTCGCAGTTGATGGAACAGCTCCATAACCTTGAT TTGAATTATGGTTCTACAACTTGGCAAGATTCCGTCTATAAACCGTCGTCGCCGTCATGGAGTTGAGATCTTGGTCAAATTTGTGCTGCTTTATAAAATC CATGCTCAATAATTTTGGCTCACATGTTGTATATCCTGACTCATTGCATATATTTGTTGTGTCCTTTGTGGTCTATGTACTGCTTTATTTATATATAAAA ATACAACTTTGGTAGTGAAAGTTCATTTGAGTTGAATTAAGTAGCTTCTCCCTTTGTTGTGCATCAACTTTTTCTCTTTTTAATCTTTCAGAATTGAATT TCTTTGTTTCTTTGTTATGTTATTTGTTATGGAGTTTGGTGTAATTATATTATTTGTTATGTTAGTAGCTTGGGAAATTTTGTTGTTGAACAAAGCTATT ATGAGGAAATTTTATTTCCTTTTTAGCAAATTCTTTGTACATATGTGTGAAAAATCAATGTTATGTTGTTACTGTGTATCAAAATTATGTTCAAAAA
• Tissue: pods
• Gene name: LI_gene_186206;
• Additional information: details;

Expression of Ll_transcript_298096

FPKM

• PAB: 1.3
• PNAB: 5.8
• PS1: 8.3
• PS2: 7.5
• PS3: 8.2
• PW1: 7.4
• PW2: 5
• PW3: 6.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_298096

• Blastp: Rho GTPase-activating protein 7 from Arabidopsis with 71.32% of identity
• Blastx: Rho GTPase-activating protein 7 from Arabidopsis with 70.63% of identity
• Eggnog: rho GTPase activating protein(ENOG410XR4E)
• Kegg: Link to kegg annotations (AT5G19390)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461528.1)
• Pfam: PH domain (PF00169.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;