Ll_transcript_300786

• Id Trinity: TRINITY_DN51599_c4_g3_i4
• Name Transcript: Ll_transcript_300786
• Sequence: CCTTACCTCACAATAGGACCCTTTCCTCTTTTTCCTCCATCTCTATCTTCTCAACTTCATTGGCTCCAGCTCTTGTGTCCCTTTCACTTACCCTTCACCT TTTTGGCACCCACTACCCACTCTCCCAAACCCACCCTTTCAAAATTTCCCACACCTCTCTAATCTCTTCTTCCCTTAGATCTCTACATTTTCTAGGTACA ACTTAATCCAATCATTACTCCTTAACACACTCTCAACTTAATGTACCATTCTCGAAATATCCGAGAGAAATGAAAGACTTCAGAGACATGAAAGTCGTGA TATAATAATTGCGGATCTCTCCGTTTTCTTTACTTTCCTTATAAAAACTAACTCGCAAACAAGTTCCGGAAGAGCACCACATTTTTAAATGGAGGTGCCT TCGGAGAAACTAGTTGAAGGAAAAACATTAGAGAACCCTAAAATCTCAGTGAAGAAGAACTCTCTAGAAGGTTCTGGAAGAACTGCGAAAACCGTAAGCA CTGAAGGTTCTGTTGGTACAAGAAAGAGAGTAGTGGAAACTCGAACCGGTTCAGTTACCGGTCAGGCTTCTGCTACGGCTGTTCCGAAAAGATCCGGTTC AGGTAGTGGTTCTGCCGTGTCGTCTTCGATTTCTGCGCCACGACGAAGCAGCACCGGTGGATTGTACCGGAAGCCGGCGCCGGTTTCCGAAGGAAGAAGG AAAACCGTCGCTGATTCTTCTGCCGGCGCCGGAGCTGGTGTTAAGAGCAATGAACCGACGCGGAGGTCTCTCCCGGAGCTCCGACGAAGTTCTCTGTCTT CTTCTTCTTCTCCGAGAAGCAGTATCGCCGGGGATCCAGTTGCGTCGGTGGGACCGAGTTCGAGGACGCGAGTTACATCAGGTACGAGTAACGTAGAGTC TGCAAAGAGGCCGTTGAGTAAGCCAGTATCATCCGAAGCTTCTATTTCGTCGCGAAGAGGTGCTTCTTCCACGGCGGATAGTAGTGGTGGCAGTTCTGTG AGGAGATCGGTTTCGAAGTTTTCGTCACCGCTATCGGCGGCGCGGTCGTCTTCGGTTTCCATTGGAATGAGGACTGGTTCTCTATCGTCATCATCACATG ATAAGAGTTCTGCTGTGTCTGGAAGGAGGAAGGTGGGGACTCCAGATAGCCGTGAGTCTCGTTTTGTTGTTCTTCCGCACGTTGACAACAAGGCCAGTGA TGATGTGAGATTGGATCTTAGGGGACACAGACTCCGCAGTCTCAATACTAGTGGATTAAACTTATCCTCAAACTTAGAGTTTGTTTATCTTCGAGACAAT CTCTTGTCTACTTTGGAAGGAGTAGAAGTATTGACAAGAGTGAAGGTTCTTGATTTGAGTTTTAATGATTTTAAAGGGCCTGGATTTGAGCCTCTTGAGA ACTGCAAAGTACTTCAGCAACTCTATCTTGCTGGAAATCAAATCACTTCATTGGCAAGTCTCCCACAGCTTCCTAATTTGGAGTTCCTCTCAGTAGCTCA AAATAAGTTGAAATCTCTGACCATGGCAAGTCAACCTCGACTACAGGTACTAGCTGCCAGCAAAAACCGAATATCCACCCTCAAGGGTTTCCCATATTTA CCTGTTCTTGAGCATTTCCGAGTTGAGGAGAACCCAATATTGAAGATGCCTCATCTGGAAGCAGCATCAATATTGCTAGTTGGGCCTACTTTGAAAAAAT ATAATGATAGAGATCTTTCTCCTGAGGAAATCACACTTGCAAAGCGTTATCCTACACATACAGCATTCTGCATCAGAGAAGGTTGGGAGTTTAGTCGCTC TGAGCATGCTGCAGATTCAACTTTCCGCTTTCTAGTTGAGAAATGGAAGGACTGTATTCCTCCTGGGTTTTTTCTCAAAGAAGCCTTCATAGATAAACCT TTAGAAGAAGATGTGTGTCACTGTCACTTCACAATTATTCATGATGGTGCAGCAACTGCTGACTCACCATTAGTTTTAAAATATCAATGGTTTTGTGGTG AGATGTCTCTTTCGAATTTTGTCCCTATTCCAGATGCTACTAGTGAGATTTACTGGCCAAAGCGTGAAGACATTGGAAAAATTCTGAAAGTCGAATGTAC TCCCACTTTAGGTGAAACAGAGTATCCTTCAATATTTGCCATATCTTCTCCAGTTTCACCAGGGAGTGGAATTCCAAAGGTTGTAAATCTTGAAGTGCAC GGGGAACTGGTGGAAGGAAGCATCATCAAGGGGTGTGCTAATATTGCATGGTGTGGTGGGACTCCTGGAAAAGGAGTTGCTAGTTGGCTGAGGAGAAAGT GGAATAGCAGTCCTGTGGCCATTGTTGGGGCAGAAGATGAGGAATATCAGCTTACCATAGATGATATTGATTCAAGTTTAGTTTTCATGTACACACCAGT AACAGAAGAAGGTGCCAAAGGAGAACCTCAATATAAATATACAGACTTTGTAAAAGCTGCTCCTCCTTCAGTCAGTAGTGTTAGAATAGTTGGAGATGCT GTTGAAGGAAGTATCATCAAAGGAGTGGGTGATTATTTTGGTGGAAGGGAGGGTCCCAGCAAATTTAAATGGTTAAGGGAGAACGGCAATGCCGGAGATT TTCTGTTGGTGTCAGCTGGTACATCTGAGTATACCTTGACCAAAGAGGATGTTGGTCGGCGTTTGGCATTTGAATACATACCTATTAATCTTGAAGGCCA GGAAGGAAAGTCGTTGTCTGTCATGTCTCCTGTTGTGAAACAAGCACCCCCAAAAGTAATCGATGTCAAAATAGTTGGGGATCTACGAGAGAATGGCAAG GTCACTGTGACTGGTATTGTTACTGGAGGAACTGAAGGATCTAGCAGAGTTCAGTGGTTTAAAACACGTTTGTCAACTTTGGATGAAAACAGTCTAGAAG CTTTAAGTACTTCCAAAATTGCTAAGGCATTTCGCATACCTCTTGGAGCTGTTGGCTTCTACATCGTTGCAAAATTTATACCGATGACTCCTGATGGTGA TTCTGGTGAACCAGCATTTGCAATATCTGATAGAGCAGTTGAGACTCTTCCGCCAAGCTTGAATTTCTTATCTATCATCGGAGATTACAGTGAAGATGGA ATATTGACTGCTTCATATGGATATGTTGGAGGCCATGAAGGAAATAGTATATATAATTGGTGTCTTCACGAGGTCGAAGGTGATGTTGGTTCTTTGATTC CAGGGGTTTCGGGAATTCTGCAATATCGTATTACTAAGGAAGCCATTGGAAAATTCATTTCATTCCAGTGTACTCCTGTACGTGATGATGGTGTTGTAGG TGACCTACGAATTTGCATGGGGCAAGAGCGTGTTCGTGCTGGAAGCCCAAGATTGCTTTCTTTACGCTTAACTGGAGATGCTGTAGAGGGAACAAACCTG AGCATTGAAAAGAAGTATTGGGGTGGTGAAGAGGGTGATTCAGTTTACCGCTGGTTTAGGACCAGGTCTGATGGCACACAAACTGAAATCATGGGAGCAA CCACTGCATCATATGTGCCCTCTATTGATGACATTGACTTCTTTATTTCTGTTTCATGTGAGCCAGTCCGAAGTGATTGGGCTCGTGGACCCATGGTTCT TTCTGAACAAATTGGACCTATAACACCTGGTCCGCCAACATGTCATTTTCTGGAATTTCATGGATCAATTATAGAAGGCCAATGCTTGAACTTTAATGTT GTATATAGTGGAGGGGAGAGAGGAGATTGCACACATGACTGGTTTAGAGTGAAAAATAATGACGTACGGGAGAAAATAAGTAGTGATGAGTTTTTGGATT TGACTCTTGAGGATGTTGGTGGGTGTATTGAACTAATCTATACTCCTGTGCGCAAAGATGGAACCAAAGGCATCCCAAAGAACATAGTTTCTAGTACAGT TTCCCCTGCGGATCCAAAGGGAATGGATCTCATAATTCCTGAGTGCTCGGAAGACGAAGAGCTCATCCCACTTAAAAAATATTTTGGTGGACATGAAGGA AGTGGAGAATATATATGGTTTCAGACAAAGGATAAGGTTGAAGGGCCTGCACTTCTAGATATATTTAATGCTTCTGATGTGGAAATATGCGGGACAGAGC TAACATATAAACCATCACTCAAAGATGTCGGCGCTTATTTGGCTTTGTATTGGGTGCCTACTCGTGTCGACAGAAAATGTGGGGAGCCATTAGTTGCAAT TTCCAGTACCCCAGTTTCTCCAGCTCCTCCAGTTGTTTCTAATGTCGATGTTAAAGAGTTGTCTTTGGGACTTTATAATGGAGAGGGTGAATATTTTGGT GGATATGAAGGAGAAAGCCTCTTTAGCTGGTACAGAGAAAATAATGGAGGAACCATTGAACTGATTAATGGGGCAAATTCAAAAACCTACAAAGTTTCTG ACTCAGACTACAGTTATCGTTTGTTGTTTGGATATACACCAGTTCGCTCAGATTCAGTTATAGGAGAACTCAGGTTATCTGATCCAACTGACATTGTTCT CCCAGAGCTTCCATATGTGGAGATGCTTGCTCTTACTGGAAAGGCAGTTGAAGGTGATGTGCTCACAGCTGTAGAAGTGATTCCAAATAGTGAGACTCAA CAACATGTTTGGAGCAAATACAAGAAAGATATAAAATACCAATGGTTCTGTTCATCTGTAGTGGGAGACAGTTTGTCATATGATCCAATACCCAATCAGA GTTCTTGCTCCTATAGAGTGCGGCTAGATGACATTGGTCGTCGTTTGAAATGTGAGTGTGTGGTAACTGATGTATTTGGAAGGTCTGCTGAAGTGGTGTA CATTGAGACGACTCCTGTATCGCCAGGGATTCCGAGAATACAAAAGTTGGAAATTGAGGGGGGAGGATTTCATACCAATCTTTATGCTGTCCGTGGCACT TATAGTGGTGGTAAGGAAGGAAAAAGTAAAATCCAGTGGCTTAGATCAATGGTTGGAAGTCCTGACCTGATCTCCATACCAGGAGAAACTGGCAAACTGT ATGAAGCAAATGTTGATGATGTTGGCTATAGGTTGGTGGCCATCTATACCCCTGTAAGAGAGGATGGAGTAGAAGGCCAACCAATTTCTGTATCGACGGA GCCAATTGTCGTTGAGCCTGATGTTCTTAAAGAAGTGAAGCAGAACCTTGATCTTGGATCAGTCAAGTTTGAGGTATTGTGTGACAAAGACCAAACTTCA AAAAAGGTTTCAACATTGGGCACTTATATGAGGCGAATCCTTGAAGTTAACAGGAAAAGAATCAAGGTGGTAAAATCTGCCACTAAGACTTCTTTTCCAA CCACAGAAATACGCGGTAGTTATGCCCCTCCATTTCATGTGGAGATTTTCAGGAATGATCAACACCGTCTAAAGATTGTAGTGGACAGTGAGAATGAAGC AGACTTGATGGTGCACTCCCGGCACAGTCGAGATGTTATTGTTCTTGTGATTCGGGGACTTGCTCAGCGATTCAATAGTACTTCCCTCAATTCTCTTCTC AAGATAGAGACATAAATTCTTTGTCATGCATTGTATATAGTCTTTGAATCTGGAAAACTAGGTTGATTGAGGGCAGTTATCTCATGTTTTTATTGTCCTA AGAGCAAGGATTGTTACGTTGAGAGAACCGTTATTAATGCCATATACTTTGTAAGCCCTTGATTACTTATTCTGTTGGTTCACATATTATCATTTAAGGA TGTGTATTAACAATCTCATGCATATTTTGGCCTTTTGAGAATGAGTTCGTGTATATACAATTGAGTTTGAGACACTAGTACTGCTTATTTAATTGTAGTT TGCCGCTTACTTGTGTTTATGCTCAACATATGCATAATAGGTAGACTTTATTTAATGAGTATAAAATCAAGACTAAGTTTTAGTCTCTACACAAACCTCT C
• Tissue: pods
• Gene name: LI_gene_186225;
• Additional information: details;

Expression of Ll_transcript_300786

FPKM

• PAB: 0.9
• PNAB: 24.7
• PS1: 22.9
• PS2: 17.3
• PS3: 23.2
• PW1: 18.6
• PW2: 19.2
• PW3: 11.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_300786

• Blastp: 187-kDa microtubule-associated protein AIR9 from Arabidopsis with 66.59% of identity
• Blastx: 187-kDa microtubule-associated protein AIR9 from Arabidopsis with 70.82% of identity
• Eggnog: leucine Rich Repeat(COG4886)
• Kegg: Link to kegg annotations (AT2G34680)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019416977.1)
• Pfam: Leucine Rich repeats (2 copies) (PF12799.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;