Ll_transcript_408182

• Id Trinity: TRINITY_DN51604_c0_g1_i21
• Name Transcript: Ll_transcript_408182
• Sequence: GCTAACTTCCTTTGTCACCCGCCGCCTGAAACAACAACAACAAGGAACACGGAAGAGGGAAGAAAAGGGTTCCATTTTTGTTCTAAAGGATTTCCACAAA AACCGAATTCCTCATTCTCTATAACCCATTAACCCTTCCATAATCTCTTCCCTTTTTCCATTTCCTTGTTTTTTTCTCATTCAGATTTCAGTAAAGGACC AATTTCGGTGTTAGAGGAAGAATGAAGTACGTGCTGGTGACCGGTGGTGTTGTCAGTGGACTTGGGAAAGGAGTCACTGCCAGCAGTATTGGGGTACTCC TCAAGGCCTGTGGATTTCGAGTTACTTCAATCAAGATTGATCCCTACCTCAACACTGATGCAGGTACAATGTCTCCTTTTGAGCATGGGGAGGTTTTTGT TCTAGATGATGGTGGTGAGGTTGACCTTGATCTTGGAAACTATGAACGCTTCTTGGACATCAAATTAACCCGTGACAATAATATCACCACTGGAAAAATA TATCAGTCTGTCATTGAGAAGGAGAGAAGAGGAGATTATCTTGGAAAGACTGTCCAGGTTGTTCCACACATTACAGATGCCATCCAAGAGTGGATAGAGC GTGTAGCACAGATACCAGTTGATGGAAAAGATGGCCCAGCTGATGTTTGTGTCATTGAATTGGGTGGAACTATAGGGGACATTGAGTCTATGCCTTTTAT TGAAGCGCTAGGCCAATTTTCATACCATGTAGGCTCTGGCAACTTCTGTTTGATTCATGTCAGTCTGGTGCCTGTTCTCAATGTTGTTGGTGAACCGAAA ACAAAACCAACTCAACACAGTGTTCGTCAGCTTAGAGGATTAGGGATGACCCCAGATCTTCTTGCTTGTCGCAGTTCTAAGGAACTTGATGGCAATGTTA AGGAAAAACTAGCTCAATTTTGTCATGTGCCGTTATCGAACATAATTAATCTTCATGATGTTCCAAACATTTGGCACATCCCTTTGCTATTAAGAGACCA GAAGGCGCACAAGGCAATCCTGAAAGCATTGAACCTGCTAGGGTTTGTTTGACAAACTCATTCATGTTTTGGTTGTTGCTACAGAGCCTAACTTCAAGGA GTGGATCAGTAGGACAAAAGTCCATGACAAATTTCATGAATCTGTTAGAATTGCCATGGTAGGAAAATATACTGGCCTTTCAGATGCATATCTTTCTGTG CTGAAGGCACTTTTACATGCTTCTGTTGCTCACAATCATAAACTTATTGTCGACTGGGTTCCAGCTGAGCATCTTGAAGATGTCACTTTTAAGGAGAATC CTGATGCACATGAAGCTGCTTGGGGTCTTTTGAAGGGAGCTAACGGGATTCTAGTTCCAGGAGGTTTTGGTGATAGAGGAGTGCAAGGGAAAATTCTTGC TGCTAAGTTTGCCCGAGAGAACAATGTTCCCTTTCTGGGCATTTGCTTGGGGATGCAAATTGCTGTCATTGAGTTTGCAAGATCTATTCTAGGACTTCTT GATGCTAATAGCACAGAGTTTGATCCTGAAGCCAAAACCCCTTGTGTCTTATTTATGCCAGAAGGTTCGAAGACTCATATGGGTGGAACTATGCGTCTTG GTTCAAGGAGAACTTACTTCCAAGTTGCTGACTGCAAATCAGCCAAGCTGTATGGTAATGCGAGCTTTGTTGATGAGCGACATCGTCATAGATACGAGGT TAATCCTGACATGATATCACAATTTGAGAGTGCTGGTCTATCTTTCGTGGGCAAAGATGAAACTGGGAGACGTATGGAGATAATTGAATTGCCTGGTCAT CCTTTCTTTGTCGGTGCTCAGTTTCATCCCGAGTTCAAGTCAAGACCAGGGAAACCTTCTCCACTATTCTCAGGATTAATTGTAGCAGCATGCAAAATGA GTAGGACATTTCTGCCAGCAAGCAACGGCCATGCCAAGTTAACTAAAGGTATACATAATGGACACTTGTCGGTAAACACACACACCGGAAATGGGTCCAA ATCTCCCAATGGTTCCATATATGGTGTACACACCAACGGCAACGGCCTACACGCCGATGGGAGCTGTTAATCATCTGCTTTTTTTGCATACAATTTTGGT TTTGTTTTCTCCAAGGACTTTCTGATCCACGGTTACATCTTGTACAGTTTTTGAGTGGATAGATGTGTTATAGCTCTAGGCAGATTTATCTCCAACATGA AGCAAATTTTGAGTCTAGTAGCTTTTATATTTCCAAGAATATAGGATGAAACTTATGGATATTATTTGTCCACTCTGAATCAAAATGGCTATTGCTTATC ATGGTTAATTTGCCTAGGCCACCTTAAATTTCTTTGGTATTGAGCTGTAATGTTGGATAATTGGCATAGATGTACCTTTGTTCCAATGATAATAATATCA TGTGAGCATGAAACACCTTTTAGTTGCTGAGTTTCCCCTGAGAAAAGTAGAGGCATTCATAGCTGAAGTGAATCACAT
• Tissue: pods
• Gene name: LI_gene_186265;
• Additional information: details;

Expression of Ll_transcript_408182

FPKM

• PAB: 0.2
• PNAB: 0
• PS1: 0.3
• PS2: 0.3
• PS3: 0.3
• PW1: 0
• PW2: 0.1
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_408182

• Blastp: CTP synthase 2 from Xenopus with 58.1% of identity
• Blastx: CTP synthase from Dictyostelium with 68.77% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (444477)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413914.1)
• Pfam: Glutamine amidotransferase class-I (PF00117.27)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;