Id Trinity | TRINITY_DN51620_c0_g3_i2 |
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Name Transcript | Ll_transcript_409103 |
Sequence | TCTATATTTATTTCAAGAATTTCTTTTATCAGTTTTATGTTTCTTTTTGGTGAATAGTCTCTCGAATGGGCATAGTCATCTTTAATGAGATTTGGTTAAA ATAGAAACAATTTCTTATGCACCCATAGCATTGTCCTACCGCCAAATATTTATTAATATTTGTGTTTGGACACGTGAATTTAGTTTTTACCTTCCTATCT TCTTCTTCAACACCTTACCTTAGCTCGCTGTGTGTGTTCTCTCTACACTCTCACATCACTTTTCTCACACTACACTCTTTCCGCTCCAACACGATGGAGC AGTTAAAATCCATCGGTAGAGAACTCGCCATGGGAGCACAATCCAAAGAACTATTCCACAACCATTCCAAAGAATTCTTAGATCTCATCAAATCCATCGG CGAATCGAGATCTAAATCCGAAGAAGATCGCATCGTCCTCCACCAAATCCAAACCCTAAAAGTTCAACTCACTGAACCAAACATCCCCACTCGCAAGATC AAAGAATACATCATTCGCCTCCTCTACATCGAGATGCTTGGCCACGACGCTTCCTTCGGTTACATCCACGCCGTTAATATCACTCACCACGACTCTCTCT TACTCAAACGCACTGGTTACCTCGCCGTTACTCTCTTCCTCCACGATAACCACGATCTCATCATTCTCATCGTTAACACTATCCAGAAGGATCTCAAATC CGATAACTACCTCGTTGTTTGTGCTGCTCTCAACGCCGTTTGCAGGCTTATCAATGAGGACACGATTCCAGCGGTGTTGCCACAAGTGGTGGAGCTTTTA GGTCATTCTAAAGAGGCCGTTAGGAAGAAGGCGGTTATGGCGCTTCATCGCTTTTACCAGAAATCACCGTCGTTTGTGTCGCATTTGGTGGCGAATTTTA GGAAGAGGTTGTGTGATAATGATCCTGGGGTTATGGGTGCTGCTCTTTGTCCACTTTTTGATCTTGTGACTAATGATGTTGATTCTTATAAGGATCTCGT TGTTAGTTTTGTTAACATTCTTAAGCAAGTGGCAGAACGCAGGTTGCCTAAGAACTATGATTATCATCAGATGCCAGCTCCATTCATTCAGGTTAAGTTG CTGAAAATCTTGGCTTTGTTGGGTAGTGGTGACAAGAAAGCTAGTGAGAACATGTATACTGTTCTTGGTGATATAATCAGGAAGAGTGATTCATCGACTA ATATAGGGAATGCTGTTCTGTACGAGTGCATATGCTGTATCTCTTCAATATATCCCAATCCTAAGCTATTAGAAGCTGCTGCAGATGTTGTTGCGAAATT TTTGAAGAGTGACAGTCACAATCTCAAGTATATGGGCATTGATGCCCTTGGTCGGCTGATAAAGTTAAGTCCAAATATTGCGGAACAACACCAACTGGCT GTGATTGACTGCTTAGAGGACCCTGATGATACTATGAAGCGAAAAACCTTTGAACTGCTATACAAAATGACCAACTCCTCCAATGTGGAAGTGATTGTTG ACCGCATGATTGATTACATGATTAGCATTAGTGATGACCATTATAAAGCCTATATAGCATCCCGATGTGTGGAACTTGCTGAGCAATTTTCTCCAAGCAA TCATTGGTTTATACAGACCATTAATAAAGTTTTTGAGCATGCTGGAGATCTTGTGAATATTAAGGTGGCACATAATTTGATGCGGTTGATCGCTGAGGGA TTTGGAGAGGGTGATGACGCTGCATATAGTCAATTGAGATCATCTGCTGTTGAATCATATTTGCGCATTATCGGAGAGCCAAAGCTCCCATCTGTGTTTC TTCAAGTAATCTGTTGGGTTCTGGGGGAATATGGCACGGCTGATGGAAAGTATTGTGCTTCTTATATCAGTGGGAAATTATGTGACATTGCAGAGGCATA CTCTAATAATGAAACTGTTAAGGCATACACTATTTCAGCATTGATGAAAATTTATGCATTTGAAGTAGCAGCTGGGAAGAAAGTGGATCTGCTACCTGAG TGTCAATCTTTGATTGAAGAATTATTAGCATCCCACTCTACAGATTTGCAGCAGCGTGCTTATGAATTGCAAGCCCTTGTTGGATTGGATGCACAAGTTG TAGAAACAATAATGCCACATGATGCAAGTTGTGAAGACATTGAGGTTATTACTGCTAATTCAAGAATCTTCTCCTATTAGTGTAATGTTATAATCTTCTC ATATAAGTAATTCATACTCTTCAAGTTTTGACAACAAAAAGAAATTCACAGAAGGAAGGGAAGGGTCAGAAGGGAGGAGAAGGAAAGGAACTGAGTCACA TGTTTTTTAAGGAAGGAAAGGGAGGAGTGTTTTATACAAAAAAAACCTAAAAAATCAATGCCATGTAATAAAAAATAAGGGCTAAAATGACATTTCCCAT TAAAATTAGGGTTCTTCATGATGGAGCGGGTTCTGGACCATGCCTCTGCTGATAATCAACCCGTGACGGGCACGGCGGCCAACCGCACCGCTATGCACCA TTCCGTAGCGAGGAAGGACGGCAACGTTCACATATATCTTTTTGCTAAGTAGTTACAGTAATGTGCTTGGGAATGCATATTATAGACTTGATTTTCTGCT CCAAGATTATTGATATACTGAATATTTTATTCAGGTTGATAAGGACCTTTCTTTCCTCAATGGTTATGTCCAGCAATCTCTAGAAACGGGTGCTCAGCCT TACATCCCTGAGGATGTGCGAACTGGAATGGGGAATATGAGCAGTTTCGGAAGCCAAGATCAGCATGAATCTTTGCAGCATGGTCTGAGATTTGAAGCTT ATGAACTTCCAAAGCCTCCAATGCAATCAAAGGTTACTCCAGCTTCATTTGCATCCTCAGCAGACGTTGTTCCAGTTGCTGAGGCATTGTATTCAAGGGA GACCCAACATGTATCATCAGTGGGATCAGCAGCATCAGAAGCTGGACCATCAGAGCTTAAGCTACGGCTTGATGGTGTTCAGAAGAAGTGGGGAATGCCA GCTTATTCGTCTTCAACACCATCTACCTCATTTTCTACTTCTCAAAAACCAACAAATGGAGTGACTCAGGTGGATGGTGCTACAGCTATCATTTCCAAAC CACATGATAGTTATGATTCAAGAAAGACACATGTTGAAATTTCTCCAGAAAAGCAGAAGCTTGCTGCTTCATTATTTGGTGGTTCTACTAAACCCGAGAA AAGATCATCCACAAGTCATAAGGTTCCTAAAGGTAGTGCTAGTGCTGCCGACAGATCTCAAGGATCAAAGGCTGCAGGTGTACCCAATGAAGTTGTAGTG GAGGAAAAAAATCATAGACCTCCTCCAGATTTGCTTGACTTGGGAGAACCAACTGTCACTAGTGGTCCTCCCTCTGTCGACCCTTTCAGGCAATTGGAAG GACTTCTTGACCCAACCACTATTTCGAAAACAGATGACAGCGCAGTTGCTGCTACAAGTGGGCCTGATATTATGACACTCTATTCAGACATTACTGCAAG TGGGCTTAGTGACAGCGGTGCCTATTCTGTCCCAGTAAGTGGGGATAATTTAAATCTTCTATCTGAGTTGTTCAATGCTTCTGTTGGAGTTGCTAGTGCA GAAACAATTGTGACACCTTTGCCACAATCTATGAAGGGTTCAAATGCTAAAGATTCCTTACAGAAGGATGCATTAGTGAGGCAGATGGGTGTGAACCCTT CAAGTCAAAATCCCAACTTATTCAGCGACTTGCTTAGTTAATCTGTTTGCAAAGCAATTCTAATTCATGATGCTGGAGGATAGATTATACAGTGACTTGC TGCACATGGAGTTGCCTGAAATAGTTGATTATATGATACAGGGTAAAATTTAATATGAACTATTATTAGGCATGTAAGATTTAAGCTCCCTCCTTGGGGT GATTCGACATCCAGGAATGATGGCAGAACCAGGTAAAGACTTGTACTCATAGTAGAATAGCTTTTGTATTAATTGTATGCACAAGGCTTTCCTTGCTGTA TCTAGGTTTTGGTCCTCTCTGGACTTTGAAGGAAGGGTGCTGATATGCAGGGTAATTTCATTGTCATTCACGCTTCACATGAAGTTCTGGGTCATCATTG TTGTTATACCAAAGCTGTACTTTTTACTTCCCTTTTTGTGTGTTTTTTATGTCCATATAATGTTTTTGCTAATAGTAAGACACCAGGTATTGCGATTAAT AATCATTTTGACGTGTATGACAATTGTATTGGTAATAATTTTGGAGTGAAAATGAGGATATGTTCATATATTCCTCTGTAGAATGCCATTATGCGGGATT GGCCCTGTTTCATTTCTTTTGTTGCATTGTAGCCTTCTCTCTACTCCTGATTGGTTTCAGTATTGTTTCTGTATGCCATAAGACTAATGTTTTTTTGTGT GTATAAATAATGTATGTCATTAATCATGTGGTTGATCCTCCG BLAST |
Tissue | pods |
Gene name | LI_gene_186379; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_409103
Blastp | AP-4 complex subunit epsilon from Arabidopsis with 43.11% of identity |
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Blastx | AP-4 complex subunit epsilon from Arabidopsis with 82.2% of identity |
Eggnog | Adaptor-related protein complex(ENOG410XPKK) |
Kegg | Link to kegg annotations (AT1G31730) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019445113.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |