Id Trinity | TRINITY_DN51620_c0_g3_i4 |
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Name Transcript | Ll_transcript_409105 |
Sequence | TCTATATTTATTTCAAGAATTTCTTTTATCAGTTTTATGTTTCTTTTTGGTGAATAGTCTCTCGAATGGGCATAGTCATCTTTAATGAGATTTGGTTAAA ATAGAAACAATTTCTTATGCACCCATAGCATTGTCCTACCGCCAAATATTTATTAATATTTGTGTTTGGACACGTGAATTTAGTTTTTACCTTCCTATCT TCTTCTTCAACACCTTACCTTAGCTCGCTGTGTGTGTTCTCTCTACACTCTCACATCACTTTTCTCACACTACACTCTTTCCGCTCCAACACGATGGAGC AGTTAAAATCCATCGGTAGAGAACTCGCCATGGGAGCACAATCCAAAGAACTATTCCACAACCATTCCAAAGAATTCTTAGATCTCATCAAATCCATCGG CGAATCGAGATCTAAATCCGAAGAAGATCGCATCGTCCTCCACCAAATCCAAACCCTAAAAGTTCAACTCACTGAACCAAACATCCCCACTCGCAAGATC AAAGAATACATCATTCGCCTCCTCTACATCGAGATGCTTGGCCACGACGCTTCCTTCGGTTACATCCACGCCGTTAATATCACTCACCACGACTCTCTCT TACTCAAACGCACTGGTTACCTCGCCGTTACTCTCTTCCTCCACGATAACCACGATCTCATCATTCTCATCGTTAACACTATCCAGAAGGATCTCAAATC CGATAACTACCTCGTTGTTTGTGCTGCTCTCAACGCCGTTTGCAGGCTTATCAATGAGGACACGATTCCAGCGGTGTTGCCACAAGTGGTGGAGCTTTTA GGTCATTCTAAAGAGGCCGTTAGGAAGAAGGCGGTTATGGCGCTTCATCGCTTTTACCAGAAATCACCGTCGTTTGTGTCGCATTTGGTGGCGAATTTTA GGAAGAGGTTGTGTGATAATGATCCTGGGGTTATGGGTGCTGCTCTTTGTCCACTTTTTGATCTTGTGACTAATGATGTTGATTCTTATAAGGATCTCGT TGTTAGTTTTGTTAACATTCTTAAGCAAGTGGCAGAACGCAGGTTGCCTAAGAACTATGATTATCATCAGATGCCAGCTCCATTCATTCAGGTTAAGTTG CTGAAAATCTTGGCTTTGTTGGGTAGTGGTGACAAGAAAGCTAGTGAGAACATGTATACTGTTCTTGGTGATATAATCAGGAAGAGTGATTCATCGACTA ATATAGGGAATGCTGTTCTGTACGAGTGCATATGCTGTATCTCTTCAATATATCCCAATCCTAAGCTATTAGAAGCTGCTGCAGATGTTGTTGCGAAATT TTTGAAGAGTGACAGTCACAATCTCAAGTATATGGGCATTGATGCCCTTGGTCGGCTGATAAAGTTAAGTCCAAATATTGCGGAACAACACCAACTGGCT GTGATTGACTGCTTAGAGGACCCTGATGATACTATGAAGCGAAAAACCTTTGAACTGCTATACAAAATGACCAACTCCTCCAATGTGGAAGTGATTGTTG ACCGCATGATTGATTACATGATTAGCATTAGTGATGACCATTATAAAGCCTATATAGCATCCCGATGTGTGGAACTTGCTGAGCAATTTTCTCCAAGCAA TCATTGGTTTATACAGACCATTAATAAAGTTTTTGAGCATGCTGGAGATCTTGTGAATATTAAGGTGGCACATAATTTGATGCGGTTGATCGCTGAGGGA TTTGGAGAGGGTGATGACGCTGCATATAGTCAATTGAGATCATCTGCTGTTGAATCATATTTGCGCATTATCGGAGAGCCAAAGCTCCCATCTGTGTTTC TTCAAGTAATCTGTTGGGTTCTGGGGGAATATGGCACGGCTGATGGAAAGTATTGTGCTTCTTATATCAGTGGGAAATTATGTGACATTGCAGAGGCATA CTCTAATAATGAAACTGTTAAGGCATACACTATTTCAGCATTGATGAAAATTTATGCATTTGAAGTAGCAGCTGGGAAGAAAGTGGATCTGCTACCTGAG TGTCAATCTTTGATTGAAGAATTATTAGCATCCCACTCTACAGATTTGCAGCAGCGTGCTTATGAATTGCAAGCCCTTGTTGGATTGGATGCACAAGTTG TAGAAACAATAATGCCACATGATGCAAGTTGTGAAGACATTGAGGTTGATAAGGACCTTTCTTTCCTCAATGGTTATGTCCAGCAATCTCTAGAAACGGG TGCTCAGCCTTACATCCCTGAGGATGTGCGAACTGGAATGGGGAATATGAGCAGTTTCGGAAGCCAAGATCAGCATGAATCTTTGCAGCATGGTCTGAGA TTTGAAGCTTATGAACTTCCAAAGCCTCCAATGCAATCAAAGGTTACTCCAGCTTCATTTGCATCCTCAGCAGACGTTGTTCCAGTTGCTGAGGCATTGT ATTCAAGGGAGACCCAACATGTATCATCAGTGGGATCAGCAGCATCAGAAGCTGGACCATCAGAGCTTAAGCTACGGCTTGATGGTGTTCAGAAGAAGTG GGGAATGCCAGCTTATTCGTCTTCAACACCATCTACCTCATTTTCTACTTCTCAAAAACCAACAAATGGAGTGACTCAGGTGGATGGTGCTACAGCTATC ATTTCCAAACCACATGATAGTTATGATTCAAGAAAGACACATGTTGAAATTTCTCCAGAAAAGCAGAAGCTTGCTGCTTCATTATTTGGTGGTTCTACTA AACCCGAGAAAAGATCATCCACAAGTCATAAGGTTCCTAAAGGTAGTGCTAGTGCTGCCGACAGATCTCAAGGATCAAAGGCTGCAGGTGTACCCAATGA AGTTGTAGTGGAGGAAAAAAATCATAGACCTCCTCCAGATTTGCTTGACTTGGGAGAACCAACTGTCACTAGTGGTCCTCCCTCTGTCGACCCTTTCAGG CAATTGGAAGGACTTCTTGACCCAACCACTATTTCGAAAACAGATGACAGCGCAGTTGCTGCTACAAGTGGGCCTGATATTATGACACTCTATTCAGACA TTACTGCAAGTGGGCTTAGTGACAGCGGTGCCTATTCTGTCCCAGTAAGTGGGGATAATTTAAATCTTCTATCTGAGTTGTTCAATGCTTCTGTTGGAGT TGCTAGTGCAGAAACAATTGTGACACCTTTGCCACAATCTATGAAGGGTTCAAATGCTAAAGATTCCTTACAGAAGGATGCATTAGTGAGGCAGATGGGT GTGAACCCTTCAAGTCAAAATCCCAACTTATTCAGCGACTTGCTTAGTTAATCTGTTTGCAAAGCAATTCTAATTCATGATGCTGGAGGATAGATTATAC AGTGACTTGCTGCACATGGAGTTGCCTGAAATAGTTGATTATATGATACAGGGTAAAATTTAATATGAACTATTATTAGGCATGTAAGATTTAAGCTCCC TCCTTGGGGTGATTCGACATCCAGGAATGATGGCAGAACCAGGTAAAGACTTGTACTCATAGTAGAATAGCTTTTGTATTAATTGTATGCACAAGGCTTT CCTTGCTGTATCTAGGTTTTGGTCCTCTCTGGACTTTGAAGGAAGGGTGCTGATATGCAGGGTAATTTCATTGTCATTCACGCTTCACATGAAGTTCTGG GTCATCATTGTTGTTATACCAAAGCTGTACTTTTTACTTCCCTTTTTGTGTGTTTTTTATGTCCATATAATGTTTTTGCTAATAGTAAGACACCAGGTAT TGCGATTAATAATCATTTTGACGTGTATGACAATTGTATTGGTAATAATTTTGGAGTGAAAATGAGGATATGTTCATATATTCCTCTGTAGAATGCCATT ATGCGGGATTGGCCCTGTTTCATTTCTTTTGTTGCATTGTAGCCTTCTCTCTACTCCTGATTGGTTTCAGTATTGTTTCTGTATGCCATAAGACTAATGT TTTTTTGTGTGTATAAATAATGTATGTCATTAATCATGTGGTTGATCCTCCG BLAST |
Tissue | pods |
Gene name | LI_gene_186379; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_409105
Blastp | AP-4 complex subunit epsilon from Arabidopsis with 68.45% of identity |
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Blastx | AP-4 complex subunit epsilon from Arabidopsis with 68.22% of identity |
Eggnog | Adaptor-related protein complex(ENOG410XPKK) |
Kegg | Link to kegg annotations (AT1G31730) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019445113.1) |
Pfam | Adaptin N terminal region (PF01602.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |