Ll_transcript_409042

• Id Trinity: TRINITY_DN51655_c0_g2_i1
• Name Transcript: Ll_transcript_409042
• Sequence: TTCAAAATCATGAAGCTAGGGCATTAAAAGCCCTCGTTTGTATCAGGAATTGCATTCCTACATTGCCTTAATCAAATTGGTGCCTTTACGCTTTCAATAA AATCCCTCGTCTTCTTCCATTTCATTCTGGAGTAACAGGGAAATCGCCACAAAACCCCATCTTCCATTTGCACAGTGACCCAAATTTATTGCTGCGAATC GTGAAGGTTCGACTTCAATATCCTTTCCCTTTTTACTTCATTCCAATCTTTATACCCCCTTTTGTAATTTCACTTTTCACTCATTTTCTATTTATTTATC TGCTGTGAAAAAAAAAATACTTTTTTTGCTTTCCCAAACGATGTTTTATGTGTCTTTTTATGCAAGGCTTTTGGATGATGCAAGAGAAATGGAGATAGTG GTTAATTGTTGAGTTCCCCTTATGGGATTGATTCATTTCAATTTTCTAATATTACCATTTGAATTTACTATACCTGTGAAAGCTGTTCAAGTGTGTCTTC TAATATTTTTTGTATGGTTGTTTTTTTCCTTTCAACCCATTTTTATTTTTGAAGATCTTTCAATAGATTTAATTTGGGCATGTTTTCTAGTGTTTCAATA TCAATCCTTGAAGATTATTATTATTGGCATTGTGGATGTTGTGTTCTTCAGCAAGAGGAAAAATAAAATTGATTCTACTGAGCTAATCAGGCTTTAGTTA TTTGAGCATAAAATTTTTTCAAGCTTAAACTAATCTTGCTGAAAATTTGTTTATGGGCAGAATTTTAATTAACTAATAATACCTTTTCTAGTTGAACATG CCTTAGTTTTTCTAAGGTGGTCTCAATGTGCTGTTTAGTCCGCAAATTCTCGGGACCATCGGGTTTTGGAGTTAATTTCAGGGTACTTTGTGATTGATAT TTGCTTGGTTAGCTGATGACTACATGCTTGATATACTGAGCAAGTCTGTAATTTTGGATATGTATTAATTTTGTTCTTGAGTCTTTGATTAGAAATCTCT CAGGCCTTAGGTAAGTTAGAAGTTTTTTTTTTTAAATTGAACTTGTAGTAGCGAATGTAGGAAACTTATTTTCTTATCTAGGTTGCATGAACAATGAATT GATGATGACTTCCACCCATACAATTTCATCACTGTCTCCGTAATGGGGTGATTACCCCATTAAATTAGGGGTTGGGTAATGCTTGTTGTTTTGATATTTT CCATTCCCCTCAAGTAATGTAGGAGTATTTCAGCGGTCAAGGTTGGCTGTGCATGGAGGTTGCCCTTTAGATGTATTATACTGGGTTGAAGGGGGTTCTC TTGTTGGTTAGAGTATTTGATGATGCTTTATATTCATGTTTGTATTCTTATTTAGGAGTTTGTGGATTTATGCATGTTCAATTCTGATTCTTGCTTCATA AATTGTAGTTATACATATAAGGTTCCTATCCAGTATCCACATCCAGAAATTGTTTCTGTCTCACCATGGATAGACGCATGAGAACAACCAGGCCAGTAGC CTTGTCTTCGCCTTCCGTTACTGGCACCAGGACTACCACCATAACCATTGAAAACTCTGACCCATCATCCTCTTCCTCTCATCCCGAACAACAGCAGCCG GAAGTCCTTTTCCTCCCCCTCAATCGCAGAAAGAAGGTCTCGTGGAAAGAGGGAACTGTAGACAATGAGTTCATGCAGAAGAAGAGCTCCAAGAAGTGCT GTATATTCCATAAACAAAAGTCCTTTGATGAAGACGACAGTGACGAAGATGACATACCTGATCACTCTGATAAACATGCTCATGATCACAGTGAAGATGG GTGTTGTTCTAAGAATAATGATGAAGCTGGTTCAAGCAGTTAGGTACCGATCAATCAGAACAATGATGTATGAAAGGAAAATGAGATACAAATCTTTTGT AAACATAAAAGCTTTTTATAATTCATTGATGCTGGAGTGTTATGTTTATTAGTAAAAAAGTTGTAGAAATTTTGCTTGGAATAAAATCATGGGATTGAAA CAAAAGCAATGCTTTAGTTTCTTTTTTACCCTCCTGGTTGTTTCTTGAACTTGGTTGTTTATTATAGTAATCCCTTCAATTATACTATGGTAGAGATGGT TTATGTCTGTTGAACATAAGCCTGTAGATTCACAAATCTTTTTGACTGGCAGAATACATTATGGTTCTTTGTTTTATACCTTTTTATTTGTCTAGCAAGA GAGCATCATCAATTTGAG
• Tissue: pods
• Gene name: LI_gene_186647;
• Additional information: details;

Expression of Ll_transcript_409042

FPKM

• PAB: 3.8
• PNAB: 0.7
• PS1: 0.7
• PS2: 3.1
• PS3: 2.8
• PW1: 1.8
• PW2: 2.2
• PW3: 0.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_409042

• Blastp: Type 1 phosphatases regulator ypi1 from Schizosaccharomyces with 47.06% of identity
• Blastx: Type 1 phosphatases regulator YPI2 from Candida with 70.97% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (SPAC6B12.13)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449646.1)
• Pfam: Protein phosphatase inhibitor (PF07491.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;