Ll_transcript_410611

• Id Trinity: TRINITY_DN51681_c4_g1_i6
• Name Transcript: Ll_transcript_410611
• Sequence: AACAACTCACACCCAGGCAATGTATGCTCAGTCTTCTGTTGCTGTTGGCATGAAAGGTGCCACTAAGGCAATGGCAGCTATGAATAAGCAAATGGCGCCT GCAAAGCAACTCAAAATTATGCAGGAGTTTCAGAAGCAATCAGCACAATTCGATATGACTGCTGAAATGATGTCCTATGCAATAGACGATGTCTTAGATA GTGATGAAGTTGAAGAGGAGACTGAAGAGCTGACAAATCAAGTTTTTGGGACAAGGATGGGGACAGAGGATCCTTGTTCAAGGAAAAGAGAGTACACAAG GAGTTTTATACTGGTTCACCTTCTAGTCCACCGAAGGCTACGTCCAGTACTCTTGCAGCACAAGAGATTTTCCACTAAGAATTATGAGTTGCAATTACAA TATCTCACCCCGAGATTTCTATGTACCTTACACACTCCCTAATTCTTATTCACCCTTGGAAAACACATTTTCAAG
• Tissue: pods
• Gene name: LI_gene_186834;
• Additional information: details;

Expression of Ll_transcript_410611

FPKM

• PAB: 0.9
• PNAB: 1.8
• PS1: 3
• PS2: 1.5
• PS3: 2.3
• PW1: 1.2
• PW2: 0.5
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_410611

• Blastp: Vacuolar protein sorting-associated protein 2 homolog 2 from Arabidopsis with 73.17% of identity
• Blastx: Vacuolar protein sorting-associated protein 2 homolog 2 from Arabidopsis with 73.17% of identity
• Eggnog: Charged multivesicular body protein(COG5491)
• Kegg: Link to kegg annotations (AT5G44560)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019426723.1)
• Pfam: Snf7 (PF03357.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;