| Id Trinity | TRINITY_DN51740_c2_g2_i11 |
|---|---|
| Name Transcript | Ll_transcript_296409 |
| Sequence | TGTTGCTCTCACTGATCGTTATTTATGTAATTGAAGCTCGATCTAATAGGATCTTAGACTCCTAGATCGTTCCCTTGTTACCATAAACTTATTTTGATAA CATGTTAATTGTTAAATTAATTTATTTAATTGTAGTATTTAGATTTATCTCATTTTCCCACCATTTTCTACAATTTAGTGTTATACAAGCATCTGGGAGT ACAGTGAAAAGCACTTATAACTCATTCCTTTTGGTAGGGTTTGAAATTTGTTAGGTAGAATTGTGAAAAATTTGAAACTGCAAGTTCATTTGCTCAATTC CCTCCCAATAACTGGTGATTATGGATTTTATTCATCAAAACCTGTACCAAATTCCCAGAATTATTGAAAGAGATTTTGTGATTGTGGATAATAATAATAG TAATAATGATAATTTTGTGTGGAAGTGCAGGACAATGCATCAAGTCTTGCATCCCGGCATAAGAAGACAGATGCAAGGGAAATTCAAGCTTATTATCAGC AATACTATGAGCATTATGTTAGAGCTCTTGATCAAGGAGAACAAGCTGACAGAGCACAGCTCGGTAAAGCTTACCAGACAGCCGGGGTACTTTTTGAAGT GCTTTGTGCTGTTAACAAGACTGAGAAGGTCGAAGAAGTAGCTCCTGAGATTATTGCAGCTGCTAGAGATGTCCAGGAAAAGACGGAGATTTACGTGCCT TTTAACATTCTTCCATTGGATTCTGCTGGGGCTTCTCAGCCTATCATGCAGCTTGAAGAGATTAAGGCAGCTGTTTCTGGGCTCTGGAACACACGTGGTT TGAACTGGCCTAGTACATTTGAGCACCAGAGGCAGAGAACTGGAGACTTGGACCTTCTTGATTGGCTTAGGGCCATGTTCGGGTTCCAGAGGGACAATGT GAGGAACCAAAGAGAGCATTTGATTCTGCTTCTTGCTAACTCACACATAAGGCTACACCCCAAACCCGAGCCTCTCAACAAGCTTGATGACCGCGCTGTT GATGCAGTGATGAATAGTCTCTTTAAGAATTACAAAACGTGGTGCAAATTTTTAGGACGAAAACATAGTTTACGACTCCCTCAAGGTCAGCCAGAGATAC AGCAGAGGAAGTTGCTGTATATGGGATTGTATCTTCTCATATGGGGTGAAGCGTCCAACATTCGCTTCATGCCAGAATGTCTATGCTACATATTTCACAA TATGGCATATGAACTTCATGGTTTATTGGCTGGAAATGTCAGCATTGTTACTGGTGAAAATATCAAGCCTTCTTATGGTGGTAACGATGAGTCATTCCTG CGCAAGGTTATAACTCCCATATACCGTGTGATTGAAAAGGAAGCCATGAAGAGCAAAAATGGAACGGCTCCTCACTCAACCTGGTCCAACTATGATGATC TAAATGAATATTTCTGGTCACCTGATTGCTTTTCTCTTGGATGGCCCATGCGTGATGATGGCGATTTTTTTAAATCAACATTTGATTCGGGAAGAAAAGG TGCTCTTAAAAAATCTCGAAGAACTGGAAAATCATATTTTGTTGAGACCCGGTCATTCTGGCATATTTTCCGCTCCTTTGATCGTGTTTGGACCTTCTAT TTACTGGGTTTGCAGGTGATGGTCATTCTTGCATGGAAAGATATTTCACTGATGGATCTCTTTCAGAAAGATGTCTTATATAATCTTTCTAGTATATTCG TAACAGCAGCCATTCTGCGCTTACTTCAAAGTATCTTGGACCTGGTCCTGAACTTTCCAGGCTATCATCGATGGAAGTTCACTGATGCACTACGAAGTTT TCTCAAAGTCACTGTTAGTCTTATTTGGGTTGTCGTTCTTCCACTCCTTTACATACATTCCTTTGAGAACATCCCTGATGGTATCAAGAAGCTGCTTTCC TTTGTGCATCAAATAAAGGGCATTCCACCATTTTATATCCTGGCAGTAGCAGTCTATCTGCTTCCAAATTTACTAGCAGCTATTCTCTTTCTTTTCCCAA TGCTCAGGCGTTGGATTGAAAATTCAGATTGGCACCTATTTAGACTCCTCTTATGGTGGTCACAGCCAAGATGCTATGTTGGAAGAGGAATGCATGAAAG TCAATTTGCACTCTTTAAGTACACTCTTTTCTGGGTGATTCTTTTGGTTTCAAAATTTGCGTTCAGCTTTTTTGTACAGATCAAACCTCTAATTAAGCCA ACTAAGGACATAATGAGCATTCGGCATGTTGACTTTGCTTGGCATGAGTTTTTCCCCAATGCTAAGCAAAACTATGGTGCAGTTATTGCACTCTGGACTC CTGTAATTATGGTTTATTTCATGGACACTCAAATTTGGTATTCTATCTACTCAACTGTGTGTGGTGGTGTCATTGGAGCCTTTGATCGCCTGGGAGAGAT ACGCACTCTGAGCATGCTAAGATCACGATTTCAGTCATTGCCTGGTGCTTTCAACACATACTTGGTTCCTACTGACAATAAGCAGAAAAAGAAATTCTCT TTCTCAAAGCGATTCGCTGAGATTTCCGCAAGCAGAAGAAGTGAAGCTGCTAAATTTGCCCAAATGTGGAATGAAGTTATTTGCAGTTTTCGTGAGGAAG ATATCATAAGTGATAGGGAGATGGATCTTTTGTTAGTTCCTTATTCATCAGATCCTACTCTGAAAGTAATTCAGTGGCCACCTTTTCTGCTTGCAAGCAA GATTCCAATAGCACTGGATATGGCAGCTGAATTTCGAGGAAAGGACTCAGATCTTTGGAAGCGCATATATGCAGATGAATATATGAAGTGTGCTGTGATT GAAGGCTATGAATCTTTTAAACATGTTCTGAATTACTTGGTGGTTGGAGAAGCTGAAAAAAGGATAATCTCTGTCATCATTAAGGAAGTCGAAAGCAACA TCTCTAAGAATACGCTTCTTACAAATATTCGAATGGGCTTTTTGCCCTCCCTCTGTAAGAAGTTTGTGGAGCTTGTGGAGATTTTGAAAGACGCAAATCC CTCCAAGCGAAGCACAGTGGTTGTCTTGTTGCAAGACATGTTAGAAGTGTTTACTCGTGATATGATGGTGAACGAGATCAGCGAACTGGTAGAACTGAAT CAAAGTAGTAAAGATACTGGAAGGCAACTTTTTGCTGGTACTGATACAAAACCAGCTGTAGAATTCCCTCCTAAGGTTACAGCACAATGGGAGGAACAGA TTAGACGTCTTTATTTACTCTTGACAGTGAAGGAATCTGCTATTGAGGTTCCAACAAACCTTGAAGCACGTAGAAGGATTGCATTCTTTACCAACTCATT ATTCATGGATATGCCACGTGCTCCACGAGTTCGTAAAATGCTATCGTTCAGTGTCCTAACTCCGTACTATAGTGAGGAGACTGTCTATTCTAAGAATGAC CTTGAAGTTGAAAATGAAGATGGTGTTTCAATCATATATTACCTGCAAAAGATATTCCCTGACGAGTGGACTAACTTCATGGAGCGACTTGATTGTAAGA AAGACAGTGAGATATGGGAGAAAGACAAGAATGTATTGCAGCTACGTCACTGGGCTTCATTAAGGGGGCAAACTCTTTGCAGGACAGTTCGAGGTATGAT GTACTACCGTCGGGCTCTAATGCTCCAGGCGTTTCTTGAGATGGCCAGTGAACAAGAGATACTTGATGGCTACAAAGCTATTATAGTTCCATCTGAAGAA GATAAAAAAGATAAAAATAGTCAGAAATCCCTATATGCCAATTTAGAGGCTATGGCTGACATGAAATTCACATATGTTGCTACCTGTCAGAACTATGGAA ATCAGAAGCGTAGCGGAGATCGTCGTGCAACAGATATCCTGAATTTGATGGTTAACAATCCCTCACTCCGTGTTGCATATATTGATGAAGTTGAAGAAAG AGAAGCTGGAAAAATACAGAAAGTTTATTATTCTGTACTGATCAAAGCAATGGACAATCTTGACCAAGAAATATTTCGAATAAAACTTCCGGGTTCAGCA AAGTTAGGAGAGGGAAAGCCTGAAAACCAAAATCATGCCCTCATTTTTACTAGAGGGGAAGCTCTTCAGACTATTGACATGAACCAGGATAATTACTTGG AAGAAGCTCTAAAGATGCGAAACCTTCTAGAAGAATTTAATGAGGATCATGGTGTGCGTCCACCAAGCATATTAGGTGTTCGTGAGCATATCTTTACTGG CAGTGTGTCTTCATTGGCTTGGTTTATGTCAAATCAAGAAACT BLAST |
| Tissue | pods |
| Gene name | LI_gene_187277; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_296409
| Blastp | Callose synthase 5 from Arabidopsis with 78.94% of identity |
|---|---|
| Blastx | Callose synthase 5 from Arabidopsis with 79.43% of identity |
| Eggnog | synthase(ENOG410XQ8V) |
| Kegg | Link to kegg annotations (AT2G13680) |
| CantataDB | Link to cantataDB annotations (CNT0001755) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437222.1) |
| Pfam | 1,3-beta-glucan synthase subunit FKS1, domain-1 (PF14288.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |