Ll_transcript_296824

• Id Trinity: TRINITY_DN51753_c4_g3_i5
• Name Transcript: Ll_transcript_296824
• Sequence: TGTGGATTGCGGCCATTATGGTGAAATTATTTTGTGATCAAAAAACTATTTTTGAATTCGATGCAGTCCAAATGCGGTTTGATGCAGTTGTGTTGCTTTG TTCAGTGTCACACTACAATTGTGGTTGCAACAGTCACTAGAACTGCAGTATTGTGGCCACATCGCGTATTGTAGTCAGCAATTTGAATCAATAGTCATGA AGTTGAATTAGTTGGATTTATGAACAAACCCTTCGCTTAATTCTTTTGAATCCCAGCCCGATTTTTCCCCACTAACCAATTACGTTACGACCACTGTAAA AACTTGGTTGACGAACATGGTTTATGTGCCGCTAACGTAGCGGCTTGTCAAGCATTTGACAAACTGGCACCATCCATATCTCATGCCACACTGTATCACA TTGATCTTTATAACTTTTTCAGAGCAAGTGAACAAATAATCGTTATTTCTGTTTGAATAGCTGGTTGTACTTTTTATTGTTTTGCACATTTTAGTGCTTC TTATGATCCTTACTTTACAGAATATCATCCTTGAAATACAGTAATTTAACATTTTATGTTCAGGCCCCAATGGACCATCTTGATGAAAGAGTTGAAGCTA TTTCCCACTCTAAACCTACATCAAATTGGAGTATTCATATTTCATATGTGAGGAGGAAATTTTTACGTTGTAGCATTTTTTTGCATTATAATTGTAGAAT ACATGTTCCGGGAATCAGTATTATGTTTTTTGTGTGGATTCCTGGTCACAAATATAAATATAAAGGCCTTTTAGTAGTTAAATCTGTGCAAGCATTTGAG TTACATACAGTTATTAGAGATTGTAAATGCTTACATATACCAGGAACTGAAAATGACATGAAGTTGAAGACTATTTTGGTTTTGTTTGTAAATAGTTTTG CTGGTAACCTGCAATCTTGGTTACTATAGCTTAATCCTTCAAAACTATTCATATCTGTGTCCTAATTTCCTTTTTGGTTGTTTCTGTTGTGCCAATTTCT TTAGTTGTAGTTTATCAGATTTCTTGTTATCACATGATGAAGGAATTTCCACATTCATTCACTTTTGACTTATTACAGATAAGAACAGTTAAGGTTAGCA ACATATCACTAGTTACTCCCAAGAAGGATATTGGAGAGTTCTTTTCATTCTCAGGTGATATTCAATATATTGAAATGCACAGGGAAACTGATCGCACACA AATTGCTTATGTTACCTTCAAGGATTCACAGGGAGCGGAAACAGCAGTTCTCTTGACGGGTTCCAAGATAGGTGATCTATATGTCACCATTGCGCTGGAG GAAAACTACCAACTGCCTCCTGAAGCTCTTCCAAGAAGTCCGGCAAACCAAACTGCTGTTGCAGTACAAAAGGCTGAAGATGTAATGAGTACCATGCTTG CCAAGGGTTTCATTTTAGGAAAGGATGCAGTCAACAAGGCGAAAACCTTTGATGAACGCCATCACTTGAGCTTAAATGCTTCTTCCACAGTCGCTTCCAT TGATCAAAAAATTGGTTTAAGTGATAAACTAAGCATTGGAACAGCTATTGTCAATGAAAAGGTGAGAGAGATGGATGAAAAGTTTCAGGTTTTTGAAAGG ACGAAGTCTGCTATTGCTGTTGCTGAGCAAAAGGCAAGTATTGCTGGATCTGCTATCATGAGCAACCCTTACGTATTAACCGGAGCTTCATGGATGTCAA GTGCCTTTAGTGCTATAGCAAAGGCAGCTGGAGATGTCAGCATGAAGACTAAGGAGAAGGTTGAACAAGCTGAGTTGGAAAAGAAAGAGATCATTTACAA TGAAAGGAAAGAGACCATTGATGAATTTGGACGAATACACTTCGAATCTTCGGATGTTGGACCTGCAGTAGTTCCTGTCAACTCAGGCGATGATAAGAAG CTGGAAATTATATAACATGAAGTGACTCAAAATGCTATACATCGTCATCAGCATAGTTGGATTGATTTAGTTAGCATAGTTATTTTGGTCTTGGGTTGCT GCAGGTTTGTTGTACAACACTACAGTGACAATTCTTCTTGATTGTTATAGTGATGTTAAGATTTGTCTGACATGTGATTCTTAAATATAGCAAACATTCT TTAAAAAAAGATTGTTATTTGTATATTATCTTACTACTTTTGAGTTTTTAAATCATTCACTTGACCCTG
• Tissue: pods
• Gene name: LI_gene_187357;
• Additional information: details;

Expression of Ll_transcript_296824

FPKM

• PAB: 0.1
• PNAB: 1
• PS1: 1.8
• PS2: 0.4
• PS3: 0.9
• PW1: 1.4
• PW2: 1.1
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_296824

• Blastp: Binding partner of ACD11 1 from Arabidopsis with 56.9% of identity
• Blastx: Binding partner of ACD11 1 from Arabidopsis with 56.9% of identity
• Eggnog: actin cytoskeleton protein(ENOG4111ICI)
• Kegg: Link to kegg annotations (AT5G16840)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019420198.1)
• Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;