Ll_transcript_446276

• Id Trinity: TRINITY_DN51824_c0_g1_i1
• Name Transcript: Ll_transcript_446276
• Sequence: AGAAAAAATGCATGACCATAACTCATAGATCTCAAATTTGATTTAAGAAATAATTTCTAATATCAAACAATGTTTAAGCACGAGTTACCAACAAAAAATT ATTAAAAATGTATAAGACTTGAACCTTGAAATCACTACTTTGCTTAACAAAAACTAAAAGAAGAAAAGATAAAGTGAAGTTGTTCATGGGAGGCACAACT TCATGCAATTTGCACGATTTGGTAATATTTATAAAGTTGCACCATATGGGTAATTTTTTTTAGTCAATGTACATACACAAGTCGTGTAAATTTGTTTATA CTTATTTAATGGCGGCTAAAGAGTCTAGGACGCAAGTTCCATTTTAATAACACAGAAAAGTAGGAAGATCTGTTGATTATACTGTATAACAACACCATAT TGAGTTTCTGTCTTCAACTTTTGTAGATCTGCTTAGCTTTTCTGGGTTGTAAGAACATGTTTTTGCGTTGTAAAAGTGGTTGTAAAAGCACTTAAAAAGG TGGCAGAGAATAAACAATAGTGGTTCCTTGGTTGTAACATAGCTGAAGAAGTTTTCTGTTGTGTGCATAAACATGCGATCTGAAACTTCAACTTGGGTCA CTTCCCTTTCATGTTCAATCTCAGGAGATGTTTCATTTGTTTCAAATCTACCTCATTGGCTTAGATTCATTTTCCTCTCTCCATGCCCTCAGAGAGCACT TTTCTCTGCTGTGGATGTCTTACTCTTGTTAACTTTCTTAGTGTTTGCACTCACAAAGCTATATTCTAGGTTCACTTCTAATGAGAACAACCACGCAGAA CTCAACAAGCCCCTTATAAGAAATAGAGAAGCTTCTGTCACAACAACAATATGGTTTAAGCTAACAATAACTGCAACATCTGTTTTGGCCATATTGTACA CTGTTGCTGGTATTTTGGTTTTTACCAGTTCAACACAGGTGACATGGAAGGTGATTGATGGAGTGTTTTGGTTAGTTCAGGCCATAACACAAGTTATACT TGTAATCTTGATTATTCATGAGAAAAGATTTGAAGCTGTTGCACATCCTTTATCCCTTAGGATTTATTGGATTGCAAATTTTATCATTGTTGCTTTGTTC ACAGCTTCTGGTGTTATTCGTTTTGTCTCTGTGGACGTGGAGGAAACCAAACACTTCAGCTTCTTGGTGGATGACATAGCTTCTTTCATTTCTCTCCCTT TGTCACTTTTTCTGCTATTTGTTGCAGTTAAAGGGTCCACTGGGATTAAGTCCAGCAACGACGATTCGCGACCGCTTAATGGTGATAATACCAAGCTATA TGATGATGTTACTGGGAGAAAATCCAGTGTTACTGGCTTTGCCTCAGCTTCTTTAATATCCAAGGCCTTTTGGATTTGGATAAACCCCTTATTGAGCAAA GGGTACAAGGCACCACTGAAGATTGATGATGTTCCATACCTTTCTCCACTGCATAGAGCTGAGAGGATGTCAGTGATCTTTGAATCAAAATGGCCTAAAC CAGATGAGAGATCAAAGCATCCGGTTCGAACCACATTGCTTCGGGTGTTCTGGAGGGAAATAGCCTTCACTGCCTTCCTTGCTGTTATTAGGCTAAGTGT CGTGTTTGTAGGGCCTATTCTCTTACAGAGTTTTGTTGATTTCACAGCCGGGAAGGGAAGCTCTCCATATGAAGGATACTACCTAGTGTTGATTCTCCTA TGTGCCAAATTTGTAGAAGTTTTGGCAACTCACCATTTCAACTTCAACTCTCAGAAGCTTGGAATGCTTATCAGATGCACTCTCATCACTTCCTTGTACA AGAAGGGGCTGAGGCTAACATGTTCAGCTCGGCAGGACCATGGTGTTGGGCCTATTGTGAATTACATGGCTGTTGATGCTCAACAACTCTCTGATATGAT GCTGCAGCTACATGCTGTGTGGATGATGCCATTTCAACTTGGTATTGGCTTAATATTGCTGTACAATTGTTTAGGTGCAGCAACAGTTACAGCTTTGATT GGTCTTCTTGGTATTATTGGGTTCATTTTGTTAAGTACTGGACAAAACAAAAGGTACCAATTTAATGCAATGATAAAGCGTGACTCGAGAATGAAAGCTG TGAATGAGATGCTCAATTACATGCGTGTGATCAAGTTCCAGGCATGGGAAGAGCATTTCAACCGCAGAATTCAGGGTTTCCGTGAGTCAGAGTTCGGATG GTTTTCCAAGTTTATGTACTCAGTTTCTGGCAATATTGTTGTATTGTGGAGTGCACCGTTACTGATATCAACTCTCACATTTGGCACCGCCATTTTGCTT GGAGTTTCACTTGATGCTGGGACAGTTTTCACCACCACAACCGTGTTTAAGATCCTGCAGGAGCCTATTAGGACCTTCCCACAGTCTATGATATCTCTTG CACAAGCAATGGTGTCACTGGGAAGGTTAGATAAGTACATGTCTAGCAGGGAATTATCAGAAGATTCAGTTGAGAGAGTGAGGGATTGTGACGGCCAAAC TGCTGTGGAGGTCAAAGATGGTACCTTTAGTTGGGATGATGATTCTCAACAGCAGGACTTGAAACATATTAATTTGGATATCAATAAGGGTGAGCTTACT GCTATAGTTGGAACTGTAGGGTCAGGAAAGTCTTCCCTCCTTGCATCAATACTTGGTGAGATGCACAAAATTTATGGAAAGGTTCGTGTTTGTGGGAGTA CATCTTATGTTGCACAAACATCATGGATTCAAAATGGGACCATTGAAGAAAACATTCTCTTTGGATTGCCCATGAACAGACAGAAGTACAATGAAGTTGT CAGGGTTTGTTGCTTAGAGAAAGACCTGGAAATGATGGAGTATGGAGATCAGACAGAGATCGGAGAGCGTGGCATCAATCTAAGTGGGGGCCAGAAGCAG CGTATACAACTTGCCAGGGCTGTATATCAAGACTGTGATATATATCTTCTCGACGATGTTTTCAGTGCTGTTGATGCACATACCGGCTCTGAAATATTTA AGGAATGTGTGAGAGGAGCTCTAAAAGGCAAGACCATTATTCTTGTCACACACCAAGTAGACTTCCTACATAATGTGGATCGTATTGTGGTGATGAAGGA TGGAATGATTGCCCAATCAGGGAAGTACGATGATCTACTCCATTCCGGATTGGATTTTTCTGCTCTTGTAGCTGCGCATGAGACCTCTATGGAACTAGTA GAACAAGGTGCTGCAGGTGAAAATTTTGACAAACCAATTAAATCTCCAAAGGCAGCCCCTAATCATAGAGAAACCAACGGCGAAAGCAATTCTGTTGACC AGCCCAAGTCTAACAAAGAAAATTCTAAACTCATCAAAGAAGAGGAGAGAGAAACTGGGCAAGTAAGCTTACATATCTATAAACTATACTGCACTGAGGC TTTTGGATGGTGGGGTGTTACAGCAGTGGTCCTTTTTTCTGTGTTGTGGCAAGCATCTATGATGGCAAGTGATTATTGGCTGGCATATGAAACCTCAGCA ACGCGTGCTGAACTGTTTGATCCTTCTGTGTTTATTTCCATCTACGCGATTATTGCTGTAGTTTCACTTATTTTGATCGTTCTAAGAACCTACTCTGTCA CTATCGTGGGGCTAAAGACAGCACAGCTTTTCTTCTCACAAATTCTTAATAGCATCTTACATGCACCCATGTCTTTCTTCGACACAACTCCATCAGGGAG AATTCTAAGCAGGGCATCTACTGATCAGACCAATGTTGATATCTTCATCCCCCTGTTCATGAACTTTGCTTTGGCCATGTACATCACAGTAGTCAGCATC ATCATAATCACATGTCAAAATTCTTGGCCAACAACTTTCTTGCTAATTCCTCTTATTTGGTTGAACGTTTGGTACCGGCGCTACTATCTTGCTTCATCTC GTGAATTGACTCGTCTCGATTCAATCACAAAAGCACCTGTCATTCATCATTTCTCTGAAAGCATTTCTGGGGTCATGACAATCCGTGCATTCAAAAAGCA GAAAGAATTTAGTGATGAAAATGTTAAACGGGTTAATGATAATTTGCGAATGGATTTCCACAACTTCAGTTCGAATGAGTGGTTGGGTTTTCGCTTAGAA TTGCTTGGAAGCTTAATGTTTTGCTTTTCTACTTTATTCATGATCATGTTACCCAGCAGCATCATAAAACCAGAAAATGTTGGTTTAGCACTCTCTTACG GAATATCCTTAAATTCGGTGCTGTTCTTTGCTGTATACATGAGCTGTTTCATTGAAAACAAAATGGTATCTGTTGAGAGGATAAAGCAGTTCACAAATAT TCCATCAGAATCAGCATGGAAAATTGAAGATCGTTCTCCTCCTGCAAATTGGCCCGGTCATGGCAATGTTGATATCAAGGACTTGCAGGTCAGATATCGT CCAAACACTCCTCTTGTTCTTAAAGGCATTACTTTAAGCATTAGTGGAGGAGAGAAGATTGGTGTTGTTGGTCGAACAGGAAGTGGAAAATCAACTTTGA TTCAAGTTTTCTTCAGGCTGGTGGAACCTACAGGAGGGAAAATAATCATTGACGGCATTGACATATCCGTCTTAGGACTTCATGATCTTCGATCTCGGTT TGGTATCATCCCTCAGGAGCCTGTCCTTTTTGAAGGAACTGTCAGAAGTAACATTGATCCAACTGGACAGTATACAGAAGAAGAGATATGGAGGAGTCTC GAACGTTGTCAACTAAAAGATGTAGTGGCTGCTAAGGCTGAGAAACTCGATGCTTTAGTGGTTGATAATGGAGATAACTGGAGTGTGGGGCAGAGGCAGT TACTTTGCTTAGGCAGGGTTATGCTTAAACAAAGTGGATTGTTGTTTATGGATGAGGCAACAGCTTCTGTTGATTCTCAAACTGATGCAGTGATTCAGAA GATTATCCGGGAGGACTTCGCGTCGCGTACTATCATCAGCATTGCTCATAGAATACCAACTGTCATGGACTGTGATAGAGTACTAGTCATAGATGCAGGG CGAGCTAAGGAATTCGACAAACCCTCCGACTTGGTTCAAAGGCCATCGCTCTTTGGGGCTTTAGTTCAAGAGTATGCCAACCGCTCCAATGAACTATAAG AAAGTCTTGTGTTTCTCTTCACATGTCTGCCTCTACCATTCATATAATACATAGCAAAATAAAAAATAAGCCAAAGGGTCAAGTTTTTTTATTTATCATT CAAGTACAACGAGGAATAAGGTCGAGGGTCAAGTTTTATACAGGATTATTTTTTTAAAAAGTTAATAACGATAAAACTTTTACATCTATAAGGATGATCC AACTGGATTATCTTCTTAATTTTTTATATACATTTTATTTACTTTGTTATATCCCATTAAAATAATGATAAGTACTAATAAATATAATATCC
• Tissue: pods
• Gene name: LI_gene_187878;
• Additional information: details;

Expression of Ll_transcript_446276

FPKM

• PAB: 0
• PNAB: 0.8
• PS1: 3
• PS2: 0.8
• PS3: 1.6
• PW1: 0.1
• PW2: 0
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_446276

• Blastp: ABC transporter C family member 4 from Arabidopsis with 69.32% of identity
• Blastx: ABC transporter C family member 4 from Arabidopsis with 69.21% of identity
• Eggnog: (ABC) transporter(COG1132)
• Kegg: Link to kegg annotations (AT2G47800)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441762.1)
• Pfam: ABC transporter transmembrane region (PF00664.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;