| Id Trinity | TRINITY_DN51824_c0_g1_i20 |
|---|---|
| Name Transcript | Ll_transcript_446301 |
| Sequence | ATTAACAAAAACATCTTTACACTTAGTTGATCATAAAAATGACCCTTTTGATTCTACTTAATAAACAACAATGATTCTTTGATTTCTTTGAGGTTGCATA GAATAACAGGAACAGTGATTCTTTGGTTGTCAGAACATGCTATCTGAAACTTCAAACTGGGTCACTTCCCTTTCATGTTCAACATCAGAAGATGTTTCAT TTGTTTCAACTCTACCTCACTGGTTGAGATTCATTTTCCTTTCTCCATGTCCTCAGAGAGTTATTTTCTCTGCTCTTGATGTCTTACTCTTGTTGACACT TTTTGTGTTTGCTCTCACAAAGTTATATTCTAGCCTCATTTCTATTGACAAAAACAACAATTCAGAGCTTAGAAAGCCTCTTATTAGAAAAAGAGAAGCT TTTGTCACCACAACTATATGGTTCAAGCTAACCATAACTGCAACAACTGTTTTGGCTATATTGTACATTGTTGCTTGTGTTTTGGTTTTTACCAGTTCCA CACAAGTGCCATGGAGAATAATTGATGGAGTGTTTTGGTTAGTTCAGGCCATAACACAAATTATACTTGCAATCTTGATCATCCATGAGAAAATATTTGA AGCTGTTGCATACCCTTTATCCCTTAGGATTTATTGGATTGCAAATTTTATCATTGTTTCTTTGTTCTCTGCTTCTGGTGTTATACGTTTTGTCTCTTTA GATGTTGAGGAAAGCAAACACTTTAGCTTCTTGGTGGATGACATAGTTTCTTTCATTTCTCTCCCTTTGGCATTTCTTCTGCTTTGCATTGCAGTTAAAG GATCCACTGAGATTAAGTCCAGCAATGAAGAAACGCAACCGCTTAATGGTGAGAAAACTATGCTATATGATGCTGTTACAGGGAGCAAATCCGGCGTTAC TGGCTTTGCTTCAGCTTCTATAATATCCAAGGCCTTTTGGATTTGGCTAAATCCCTTATTGAGTAAAGGATATAAGTCGCCGCTGAAAGTTGATGAGGTT CCTTACCTTTCTCCAGAGCATAGAGCTGACAGGATGTCAGTTATCTTTGAATCCAAATGGCCTAAATCAGACGAGAGATCGAAGCATCTGGTTGGAACCA CATTGCTCCGAGTCTTCTGGAAGGAAATAGCCTTTACTGCCTTCCTTGCTGTTATTAGGCTAAGTGTCATCTTTGTAGGGCCTATTCTCTTAAAGAGTTT TGTTGATTTCACAGCAGGGAAGGGAAGCTCTCCATATGAAGGATACTACTTAGTGTTGACTCTCCTTTGTGCCAAAATCGTGGAAGTTTTGGCATCTCAC CATTTCAATTTCAACTCTCAGAAGCTTGGGATGCTTATCAGATGCACTCTCATCACTTCCTTATACAAGAAGGGTCTAAGGCTAACATGTTCTGCTCGGC AGGACCATGGTGTTGGGCCTATTGTGAATTATATGGCCGTTGATGCTCAACAGCTCTCTGATATGATGCTGCAGCTACATGCTGTGTGGATGATGCCATT TCAAGTTGGCATTGGCTTATTTTTGCTTTTCAATTGTTTAGGTGCAGCAACAGTTACAGCTTTGATCACACTTATTGGTATGTTTTGTTTCATTTTGGTA TCCACTCGCCAAGACAAGCGTTACCAGTTCAATGCAATGATAAATCGCGACTCAAGAATGAAAGCTGTGAATGAGATGCTTAATTATATGCGCGTGATCA AGTTCCAGGCATGGGAAGAGCATTTCAACCAGAGGATTCAAGGTTTCCGTGAGGCGGAGTTTCGGTGGTTTTCCAGGTTTATGTACTCAGTTTCTGGCAC TATTGTTGTGTTGTGGAGCACACCATTATTCATATCAACTCTCACATTTGGCACTGCGATTTTGCTTGGAGTTCCACTTGATGCAGGGACAGTTTTCACC ACCACCACTGTGTTTAAGATCCTGCAGGAACCTATTAGGAACTTCCCACAGTCTATGATATCTCTTGCACAAGCAATGGTGTCATTGGGCAGGTTAGATA AGTACATGTCCAGCAAGGAATTATCAGAAGATTCAGTTGAGAGAGCGAAAGGGTGTGACGGGAAAACTGCCGTGGAGGTAAAAGATGGTACCTTTAGCTG GGATGATGATGGCCTACAGCAGGACTTGAAACACATTAATTTGGAGATCAATAAGGGGGAGCTCACGGCTATTGTTGGGACTGTAGGATCAGGAAAGTCT TCTCTCCTTGCATCAATTCTTGGTGAGATGCACAAAATTTCTGGAAAGGTTCATGTCTGTGGGAGTGCGTCTTATGTTGCACAAACAGCATGGATTCAAA ATGGGACCATTGAAGAAAGCATTCTCTTTGGTTTGCCCATGAACAGACAGAAGTACGATGAAGTAGTCAGGGTTTGTTGCTTAGAGAAAGACTTGAAAAT GATGGAGTACGGAGATCAGACAGAGATTGGGGAGCGTGGAATCAATCTAAGTGGGGGGCAGAAGCAGCGTATACAACTTGCTAGGGCTGTATATCAAGAC TGCGATATATATCTTCTTGATGACGTCTTCAGTGCTGTTGATGCACATACCGGCTCGGAAATATTTAAGGAATGCGTGAGGGGAGCTCTAAAAGGCAAGA CAGTTATTCTTGTTACACATCAAGTAGACTTCCTCCATAATGTGGATCTTATAGTGGTGATGAAAGATGGAATGATAGCTCAATCAGGGAAGTACAATGA TCTACTCAATTCTGGATTGGATTTTACTGCTCTTGTAGCTGCACATGATACCTCTATGGAACTAGTAGAACAAGGTGCTGCCGGTGACAATTTGAACAAA CCAATTAAATCTCCGAAGGCAGCTCCTAATGACAGAGAAACCAATGGTGAAAGCAATTCTCTTGACCAGCCCCGGGCTGACAAAGAAAATTCTAAGCTCA TCAAAGAAGAGGAGAGAGAGACTGGGAAAATTAGCTTACATATCTATAAACTCTACTGCACTGAGGCTTTCGGGTGGTGGGGTATTACAGGAGTAATTGT TCTCTCTTTGTTATGGCAAGCATCTATGATGGCAAGTGATTATTGGCTGGCATATGAAACCTCCGAAAAGCGTGCTCAAGTGTTTAACCCTTCTATGTTT ATTTCCATCTATGCAATCATTGCTGCTATTGGGATTATTATTGTAGTGGCTAGATCCTACTCCTTCACAACCATTGGACTAAAGACAGCTCAAATTTTCT TCACACAAATTCTTCACAGCATCTTGCATGCACCCATGTCTTTCTTCGACACTACGCCATCCGGAAGAATTTTAAGTAGGGCATCCACTGATCAGACCAA TGTTGATATCCTACTCCCATTGTTCTTGGGTATTATTATTGCCGTGTACATATCGCTGCTCGGCGTCCTCTTCGTGACCTGTCAGAACTCTTGGCCAACA GCGTTCTTGTTAATTCCTCTTGTTTGGTTGAATCTATGGTACCGGGGTTACTTTCTTTCTTCATCTCGTGAATTAACTCGCATGGATTCAATTACCAAAG CACCTGTTATTCATCACTTCTCTGAAAGCATTTCAGGGGTTATGACAATCCGTGCATTCAGAAAGCAGAAAATTTTTTGTCAAGAGAACATTAAGCGGGT GAATGCTAACTTGCGTATGGATTTCCACAATTATAGTTCCAACGAGTGGTTAGGATTACGCTTAGAATTGCTTGGAAGCTTAGTCTTTTGCATTTCTACT ATGTTTATGATCGTCCTACCCAGCAGTATCATAAAGCCAGGTAACTTGACACCGAAGGAATTCAAAAATTACTGCCTTGTCTTGATTCTATGAAGATAGC GCTTCATTAAAGTCCTCCACTAGTATCATTCTTAAATGTTTGAAAATAGATATAGATTGTGCTGTCTAGTATATACTTTATCTTGGATATTTATGCTGCC GTGAAATTTTATCGACTTAAGGAACTCACTAGGTTGTTCTGCATGTATTTTGATGTAGAAAATGTTGGTTTATCTCTTTCTTATGGGTTGTCCTTGAATG CTGTCTTGTTTTGGGCTGTATACATGAGCTGTTTCAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_187878; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_446301
| Blastp | ABC transporter C family member 4 from Arabidopsis with 63.59% of identity |
|---|---|
| Blastx | ABC transporter C family member 4 from Arabidopsis with 63.32% of identity |
| Eggnog | (ABC) transporter(COG1132) |
| Kegg | Link to kegg annotations (AT2G47800) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441762.1) |
| Pfam | ABC transporter transmembrane region (PF00664.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |