Ll_transcript_446554

• Id Trinity: TRINITY_DN51840_c0_g1_i18
• Name Transcript: Ll_transcript_446554
• Sequence: ATGCATCTCTCTCTCTGTTTCTATTCTGTTCTTGATTGCATGCACTTTCTCTCTTACTCACACAACTCATTCATCTCTAGCTAATTCCTATTTGTTGCTA CCCTCTTCGCTTAAACTGATAGGGAGGGAGACGTTGATTTTATTAATCTTGAATTTGAATTGAATTGAAATGGAATCTGAAGTTTGCATGAATGGTTCGT GCCGCGGTGTCGGGCATGAACGTGAATGGAAGCAGGGTTGGTCTCTGGAATCTGGTGGATTTGCACGTCTTTGCAACAATTGCGGATCTGCTTATGAGAA TTCAATCTTCTGTGAGAAATTCCATCGTGAAGAGACTGGGTGGAGGGAGTGCAGCTATTGCAACAAGTCTATCCACTGTGGATGCATAGTATCATTGTCT TTGTTCAAGCACCTTGATTTTGGAGGTATAGGTTGTGTTACTTGTGTGAAGACTTCCCAACACTGTCTGGTAAGGTTAATCTGGATATCAGTATCTTTAT GATGATTTCCTTGCCTAAAGCTTGTTTCTTTAGAAATCAATGGTTGCTTTCTACTGCTATTTTATTCGTCTCATATTGTTTAATAAATTTTTCTTTTGGA ATTTCACTTATGTGCATGGGTGTCTATATTTTCATCGAAGTTATTTAATGCAAGAGTGGTCACACAAGTATTATGAAGTTATTGTTGAAATCTATAGGGA TTGTTATGCATTTCTAACACCAAGCTCTCAGTTACCATCAGTATGCGAGTTATGCATGTCATTGGTTACAATCCATTTAGAGGACCACATGCATAATCCA TGCTATTTGATTCTCTGTCACTGTAGCTGAGAAAGTTCAGACTTTATTATTCATCGTTTTTCTGTCGATACAGGATATTGAAAATCCTAATGTGTCTTTG ATGTCAACCAAAAGTAATGCAAGTAATCGGCATGCTGCTCATAAGGATGATAGACTGTCAGTGGATAGTGTTGATGAAGGGAGACTTATGCAACTGTGTA GAATTATTCAAGCTACTGAATCAAGCCAATGCCCTCAAGCTCAGAGAGACGGCACAGTTTCACGTATTGATTCAAACAGCCAAGAAGTTAAGTGTTCATT CAGGGAAGCAGATGCAAGATTTTCGAAAGTGATGAAACCGTCAAGACATACATTAACATCTAACTCATTAGGAAACAGTAGACCAGCATGGGAGAATAAA AATATGCATGATGCACTTGCACTAAGTATGTCACTGGGAACCCCATCAAAAAACACTGTCCTGCCTTCTGCTACAGAGAAGGCAGAAGAGAGACTCGAGG GCAAAGAATCTCCCCCCTTTCATCAAGGGCAAAGGTCTCACCCTATATTGCCCAAACCATCGAAGACTGGACTAACCATGAATCTGGAAACAAATAATGG AATGATTTCTGAGGCATGCCTTCCCCGGCCACCTGCCGAGTATAATGGCAAGCATCAGTTACTGCCTCGATACTGGCCCAAGATAACTGATCAAGAGCTG GAGAAATTGTCTAGGAATTTGAAGTCCACTGTAGTGCCACTATTTGAGAAGGTGTTGAGTGCCAGTGATGCAGGTCGAATTGGTCGTCTTGTTCTCCCAA AAGCCTGTGCAGAGGCCTATTTTCCTCATATTTCACATTCAGAAGGCCTTCCTTTGCAGTTCCAAGATGTGAAGGGGAATGAGTGGACACTTCAGTTCAG ATTTTGGCCTAATAACAATAGTAGGATGTATGTTTTGGAGGGCGTGACACCTTGCATACAGTCCATGCAATTAAATGCTGGTGATACTGTAACATTTAGT CGGATAGATCCTGGAGACAAATTTGTTTTGGGTTTCAGAAGGGCATCAAGTTCTACCGATACACAGGATGCCAATGCATCTGCTCAATCTAATGGCATCT CAACGGAGGAAACTGTCACTGGTCCAACTCAGAACCCACGATCAAGAAGTAATTGTCCAGATCTTCTGTCAAAGAAAGAGATGGTGGAACCTCACTTAAA TGGGCATCCAGAACATCTGCATTTGGGTACCGGAGGTGATAAAAAATGTGAGATGATAAAAAATGATCTGTTGTGGCAACCGATTTCAGATTCAGAGAAG AGGACTCGTAATATTGGGCCTAAAAGTAAGAGGCTGCTCATTCATAGTGAAGATGCAATGGAGTTGAGACTTACATGGGAAGAAGCACAGGGCTTGCTTC ATCCACCACCTAGTGTCAAGCCAAATGTTGTAACAATTGAGGACCAAGAAATTGAAGAGTATCATGAACCCCCGGTTATTGGAAAGAGAACTATATTCAA TGCCAGTCCAACTGGGGTTCCAGTAAATGTTCTTCCTCCCAAGTGGACATGTTCTGATAATGTTTGGGATGCAAGCAGGTCTTTATGTTCTGCACCAGAG GAGCGGAGTAGAATGGAATTAGATGATCTTCTGAGAACCAGCAAAGTTTCTAAGAAGCGGAGAAGGCTAGAAAAGAGCGAGTCAATTGAAGAACATGAGC CCTCTGGCTTAGAAGCTCTTGCCAATGCAGCAGTTTTGGGGGATATTCTTCTTGACCCTGCTGAGCCATCATCTAGAGTCACCACAAAACATCCGAGACA CCGTCCTGGCTGCACTTGCATTGTGTGCATTCAGCCTCCAAGTGGGAAAGGGAAACATAAACCAACATGTAACTGCCTTGCATGCATGACAGTGAAGCGC CGATTCAAAACCCTTAAGATGCGCAAGAAGAAATGCCAATCAGAACGTGAAGCAGATGCATGTGCTTCCCAGAAAGATCAAATCCAGCAATGGGATGAGC CAGATGCCAATAGAGCATCAAAAGATGATACAAGTCAATTAGATCAACCCAGTGCTGCTGCACATATGGATCCGGGTTGTGATCCCAACTGCGAAGACAT GCCAGTCGATGATATAGATATTCCGGGACGTAGCGCTTGACCGATCAAAGACAAAAAATATCTCTTTACCTTTCTACACAGTATAGTTTGCTACCCCTTT CAAAGGGGTGGTTAAACATAGTTTTTCTTTCATACAGAAAACATATAAAATTCTATTTTCTTCATATGAATGAGACTGGGAATGTGCTCTTCATCGTTCA GTTTTAAGAATGGAACATAGGTTGTGCAACCTATTACAATGTTATTACTTGCTGTCTAAGGAATTTATAGATTAGAAAACGGCTTTTAGGTTTCTGCATT TAGGATTGTGCTGAATATAAAGACGAGTCTAGTAGTGTAAGGCGCCACTGGATCCCATGATCGAGAGTCTCATTCTTGGGAGCGACATTTGTTAGGAGGA GGAGCCATGAATCCCGAAAGAGATCAATATATTCTTGGCAGTACAAAAAAATATATGTTTGGTAGTCTCTCATTTTACATGCATAGTGATTTAAAATAAT TTGAAAATAAATAATAAAT
• Tissue: pods
• Gene name: LI_gene_187992;
• Additional information: details;

Expression of Ll_transcript_446554

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0.1
• PS2: 0.3
• PS3: 0.4
• PW1: 0.1
• PW2: 0.2
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_446554

• Blastp: B3 domain-containing transcription repressor VAL1 from Arabidopsis with 50.58% of identity
• Blastx: B3 domain-containing transcription repressor VAL1 from Arabidopsis with 50.58% of identity
• Eggnog: B3 domain-containing protein(ENOG410Z235)
• Kegg: Link to kegg annotations (AT2G30470)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019455744.1)
• Pfam: B3 DNA binding domain (PF02362.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;