Ll_transcript_445844

• Id Trinity: TRINITY_DN51871_c3_g1_i2
• Name Transcript: Ll_transcript_445844
• Sequence: TAAAGATGGAGATTTATGCTTGCTATGGCAAGAAGATGCAACATCTTTGTAGTGCTTCATGTCAAAATATAAAGCAACTAACCAAATCAATTTTTTTCCT AGGTGCGTGCTTTTGCCGCTTCATCCTCCGTAGTGCAAACCCACTGTGGGTTCAGCTTTTCTATTTCATCTCTCTTTCATTTTTTGGCTTTGGTGTTCTC AAGGTTCTAAAGCCTAGAACATCTTTTACTCCTACAACTTTAGATTTGTTCTTCACCTCCGTTTCTGCCACTACAGTTTCTAGCATGGCCACGGTTGAAA TGGAGGTTTTTTCTAACCCCCAACTTATAGTTATGACCATTTTGATGTTCATAGGTGGTGAGGTTTTTACCTCTATGATAGGGATCCATTTTATTAGGTC CAAGTTCAAAACTGAGTTGGATAAAATAGCTTCTTCACATAGCCGTCTTAGTACTCCAAACCAACCCATTATTCTTGATCAAATTGAGTTAGAAATAGTC ACAAAATCTAGTCCAGATAATTCCAAACTTGAGGAATTTTATGAGTCTTATTTGGGTTCTACAGATAAAAACTTGAGGTATTTATCTATGAAATATTTGT TTTTTGTAATTCTAGGTTACCTTGTAGTTATCCATGTTATAGGGGTCATAGGGGTGTCCCTTTACCTTGTTGTTATTCCTAGTGCTAAAGAAGTACTAAA GAACAAGGGTCTAAAAATGTTTACATTTTCTGTTTTTACTATAGTTTCAACTTTTTCAAATTGTGGCTTTGTTCCAACAAACGAAAATATGGTTGTTTTT AGCAAGAATTCAGGTCTCTTACTTATGCTTATTCCTCAAATCCTTCTAGGGAATACACTGTACCCTTCATCCTTGAGATTTATTATATGGGTTTTGGGTA AATTTTACAAGAAAAAAGAGTGTAAGTACCTTTTGAAGAATACAGAAGAGGTTGGGTACAAACACTTGCTTCCAAGACAACACTCTATGTTTTTGGTAGC AACTGTTATTGGGATTGTTGTGGTTCAAGTAGTGTTGTTTTGTTCAATGGATTGGAATTCAGAAGCATTGATGGGACTGAATAGATATCAGAAATTGATT GGAATAGTGTTCCAATGTGTGAATACAAGGCATACAGGAGAAACCATTGTGGACCTTTCAATTATATCACATGCCATCTTGGTATTATTTGCAGTTATGA TGTACCTTCCTCCTTACACAACTTTTCTTCCTGTTAAAGATGATGCACACAATTCAGAAAGTGGTGGCAGAAAAAAGAGAAAAGCAAAAGTTGTAGAGAA CTTGATCCTCTCACAACTCTCCTATTTAACTATCTTCATCATACTCATCTGCATAACTGAAAGGAAAAAGTTGAAGGAGGATCCTCTCAATTTCAACGTC CTCAATATTGTTCTTGAAGTTATCAGTGCATATGGGAACGTGGGATTCACAACAGGATATAGTTGTAAGCGACAGTTACATGTAGATGCAAACTGTGAAG ACAAGTGGTTTGGATTTGTAGGAAAATGGAGTAATGAAGGAAAGATTATTCTCATTTTTGTCATGATTTTTGGAAGGCTCAAGAAATTCAACATGAATGG AGGAAAGGCATGGGTCCTACTCTGAAATCTGAATATATCCTATCACTTACCAAATACTACCATGGGAATAAAGTATGTTCTTGCATAAGGAGATAATTTA TCTCCTTAAATTCATCAACTGCTTGACATGTGTCTGATTTCTCTTTTTTCTATGAGTTTTCATTTTAAAATATATTATAAAAGACTTGTATCAAAG
• Tissue: pods
• Gene name: LI_gene_188184;
• Additional information: details;

Expression of Ll_transcript_445844

FPKM

• PAB: 0.6
• PNAB: 0.4
• PS1: 0.1
• PS2: 0.6
• PS3: 0.8
• PW1: 0.2
• PW2: 0.7
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_445844

• Blastp: Probable cation transporter HKT6 from Oryza sativa with 49.53% of identity
• Blastx: Probable cation transporter HKT6 from Oryza sativa with 49.53% of identity
• Eggnog: Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA (By similarity)(COG0168)
• Kegg: Link to kegg annotations (4328468)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019457352.1)
• Pfam: Cation transport protein (PF02386.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;