| Id Trinity | TRINITY_DN51880_c1_g2_i4 |
|---|---|
| Name Transcript | Ll_transcript_448286 |
| Sequence | CTCTGACAGACGTGTAATCACGGAATACGTGTCTGTAACTCACATTCCTCCGCCATCGTTTCCGCTTAACCAATCGAAGTGTTTCCGTTTGAATTTCATG CTTCACTTCATTGCCTTCTTCAACATACTCCTTTATCCCAATTCATTTCACCATTCTCCATTCTTCCACCTTCTACAAGTGTGTTAAGAATTAGGGTAAT GATGGAGAAGGCTGATTCAGTGAAGAAGCTATACACACAAATGCGACTTTGGGAATTTCCTGATCAATATGTGATTCAACCAACGGATGGATCTTCTTGT TCTTCATTGTCGATCAGTCGAAAAGATGGCTCCATGAAACTCATTGATGAGATTCCGGAATACAGGACCATTAGAATTCCTAAGATTTTCACAATTTTTG GTGTGGTTGGGATGATGAGGCTTTTGGCTGGGTCATATTTGATGGTTATAACTGGGCGGAAATGTGTTGGATCATATTTGGGGCATCCAATTTTTAAAAT TTCATCCATGAAGGTTTTTCCATGTGATCACTCTCTTAAACATACCCCTGCTGAACAAAAGAGGACAGAGATGGGATTTTCTGCACTTTTAAATGTAGCT GAGAGGACTTCTGGTCTGTTCTTCTCGTATGACACTAATTTAACTCTGAGTGCTCAACGACTGAATGACCTGGGCGACGAGTCTAGATCGCTTCCTCTTT GGAGACAGGCAGAGCCTCGATTTCTTTGGAACAATTATATGTTGGAAGTAATCATAGATAACAAGCTTGACCCATACTTGCTCCCTATTGTTCAAGGAAG TATCATTTTCTTATTGTTGTATTCATTTTATGGTTGTTTTCTAAGACATGCATTGTTTTTCGGTTTGTTTAATCTGACCGTTTTCATTGTTATCTCGCAA TGACGTAACTATTTCCTTTTAAGATTATCCTTAACAATGCATCAGGCTTTCATTACTTTCAAGCAGCCATTGGAAAAGATATTATCGACATCACTTTGAT TGCTAGGAGATGCACAAGAAGAAATGGAACTCGAATGTGGAGAAGAGGAGCTGACCCTGATGGGTATGTCGCCAATTTTGTGGAAACGGAGCAAATTATG CAGATCAATGGGTATACAGCATCCTTTGTTCAGGTTCGTGGTTCAATTCCACTGCTTTGGGAGCAAATTGTTGACTTGACATATAAACCGAAGTTTGAGT TATTGAAACTTGAAGAAGCTCCTCGAGTCCTAGAACGCCATTTCTTAGATTTAAGAAAAAAATATGGGGCTGTGGTAGCTGTTGATCTCGTCAACAAGCA TGGAGGAGAAGGGCGACTATGTGAAAAATTTGGAAGTACAATGCAGCAAGTGGCTAGTGATGATGTAAGATATATACACTTTGATTTCCATCACATCTGC GGGCACGTTCATTTTGAGAATCTCGCAATCCTTTATGATCAAATTTCAGATTTTCTTGAGACAAATGGATATCTTCTGTTAGATGAAAAGGGAGAGAAAA TGAAGGAGCAACTTGGGGTTGTTAGGACCAATTGTATTGATTGTCTGGACCGTACAAATGTTACTCAGAGCATGATAGGCCGAAATATGCTAGAATACCA GCTTAGAAGACTAGGTGTCTTTGGTGCTGAAGAAACCATTAGTTCACATCCAAACCTGGACGACAGCTTCAAGATCTGACTTCAATCATAGATTCTATTC TAACTGATTATTTATGATCAGTGTGGGCTAATCATGGGGATGATATAAGTGTTCAGTACTCAGGCACTCCTGCTCTGAAAGGAGATTTTGTTCGATACGG ACACCGCACTATAGAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_188262; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_448286
| Blastp | Phosphoinositide phosphatase SAC6 from Arabidopsis with 78.04% of identity |
|---|---|
| Blastx | Phosphoinositide phosphatase SAC6 from Arabidopsis with 78.6% of identity |
| Eggnog | Phosphatase(COG5329) |
| Kegg | Link to kegg annotations (AT5G66020) |
| CantataDB | Link to cantataDB annotations (CNT0000925) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421966.1) |
| Pfam | SacI homology domain (PF02383.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |