Ll_transcript_398067

Id TrinityTRINITY_DN51900_c6_g3_i1
Name TranscriptLl_transcript_398067
SequenceGTTTCATAATAATATGGGTAGCACATAGAAAACAATGTACATAAAAGCCATATTCCCCAAAATTATTACAAAGTTCTCCATCATCTAAAAAGCAAAAGTC CCAAGCACATGATCCCATAATGGAAGAAACAACAGCAACAATCATGGCTGCACTCTCCACCCTCAAATCTTCCCATCTCTCAGATCTCACAAACACCATC CTCTCAGCCACCCACCACCACCACCACCGCCTCTCCTTCCTCCTCTCTTCCCCTACCCTTTTTTCTTCAACCCTTCATCATCTCCACAAACTCTCCCTCC GTCAAAAGACCCTCCTCATTGCCCGCCACCTCCTCTCCTCCCTCCACCACCTCACCCGCCACCTCATATCATCATCGCCACCGCCTTTGTCTACTGCCAT GAGACAACGTCAGACTGATGCTGTTTTACTCCTCCTCCTGTTCTGTGACACACAGAAACACAACCCTGAAGCCTTGGATGCACCCTATTCAGAGTGGAGG GTGAACATGTGCAAGCTCTACTCTCATAATCTCTTGAACCTTTCTTGTTCTTCAATCATACCCTTTGGGACATGTTTTGGAACAATCTTGATCCCTTATA TTGAGATGGTGGCACGGTGCTGGAGTATGGTGGAGGCACTGGGTTGTGGTGGTGGTGGTGGTGGTGGGAAGGAAGTGGGGGAGGTGGCGGCATCAGTGGC GACAGTAGTCGCTCTTCCGACGGTGGAGGTGGTGGCTGGTGGTAAAGAATGCGTGATATGCAAAGAGGAGATGATAATAGGGAGGGATGTATGTGAGTTG CCATGTCAACATTTGTTTCATTGGAGTTGCATATTGCCTTGGTTTGGGAAGAAGAACACGTGTCCTTGCTGCAGGTTCAGGCTACCGTCCGATGATGTCT TCGGAGAGATCCAACGGCTGTGGGAAGTCTTAGTTAAAATGGGTGGGAAAGAATACTTAGGAGGATGATTCTTAACCTTTATTAATATTTTATTGTATTA ACTGCCTTTAATCATAATAGTTCATGATTTAACTAGAATCACTATTTAGAACAATCAATGATTGAAACTGCATACTACATTACCTGCTGTTGTTGCCGCA AAATTACAGTTGTGAGAATTGTTGCCACGGTATCATATCGTAATTGTAGTGTGATTCGAAACGCAATGATGCAACCGTATCAGGCCACAATATAACCGTA TCAGACTACAAAATAGTTCACATTGCAACAACTGTAATTCGTATCGCAAGTGCTGCAATGACCGCAATTACAGTAATCACAATAATTATTACAATCATGA CTACAACCGCAATTTAAAACATTGATCAAGTTCGGGACTTATGATCTTGTGATGAGGAGAAGATAGTGTAGCTTCTTTGATGGTGGACTTGGATGGCTTG CATGTGTTTGTCTGGTTTTACGCCTAAGAGAGGGGCTCGTGTGGTTGAGGTTAGGATTTGTGTGGCCAAATGAATGGACGGATAAGTGTGGGGTTTTAAA TCTTGTATGTAGACTCGTATAGATGTCAATCATATGATAGATACAATCAATAAATTCCAAGGGAAATTAATTACAATACCTTTCACACTGTTTTCCTCGA GTTGGCGATTGACTAGAATTAATTGTTAAGTTTCTGTTAGCCTCATGATTCTTGTCAATGATATTGTATTCCTTCTGACTCAAAACAAATTTTGATTGAA TTTCCATTTACATTTTCCTTTATGCAGCA BLAST
Tissuepods
Gene nameLI_gene_188435; 
Additional informationdetails; 

Expression of Ll_transcript_398067

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_398067

BlastpE3 ubiquitin-protein ligase SGR9, amyloplastic from Arabidopsis with 50.71% of identity
BlastxE3 ubiquitin-protein ligase SGR9, amyloplastic from Arabidopsis with 48.57% of identity
Eggnogzinc ion binding(ENOG41121N2)
KeggLink to kegg annotations (AT5G02750)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019443031.1)
PfamRing finger domain (PF13639.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;