| Id Trinity | TRINITY_DN51919_c0_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_397199 |
| Sequence | ACACACTCTTCTCAATTCTCAATCGAATTTCATAATTACCAAAATCAATTTCTCTCTCTAAAAAACTCGATCCTTCGCTTCTGAATCTTGAACAATGGTT CTCGAGGCTACAATGATTTGTATTGACAATTCCGAATGGATGCGTAATGGAGATTACTCCCCTTCTCGGTTTCAAGCTCAAGCAGACGCTGTAAATCTTA TTTGTGGTGCTAAAACTCAGTCTAATCCAGAAAATACAGTTGGGGTTCTCACAATGGCAGGGAAAGGCGTTCGTGTTTTGGTCACTCCGACTAGTGATCT GGGCAAGATATTAGCTTGCATGCATGGACTAGAAATAGGTGGTGAGATGAACCTAGCCGCAGGCATTCAGGTGGCACAATTGGCTCTTAAGCATCGGCAA AATAAAAAACAACAGCAAAGGATTATTGTTTTTACTGGAGGTCCTGTTAAGCATGAAAAGAAAATGTTGGAGATGATTGGGAGAAAGTTGAAAAAGAATA GTGTAGCTCTGGATATTATCAATTTTGGAGAAGAAGATGAAGGGAAAACAGAAAAACTGGAGGCAGTCCTTGCGTCTGTTAACAACAATGATACTAGCCA CATTGTTCATGTTGCAGCTGGTCCAAACGCTCTTGCTGATGTACTTATAAGTACACCTATTTTCACTGGTGATGGGGAAGGAGGAAGTGGATTTGCTGCT GCTGCTGCAGCAGCTACAGCAGGTGGTGCATCTGGATATGACTTTGGAGTGGATCCAAACTTGGATCCTGAACTGGCTCTCGCTCTGAGAGTTTCAATGG AGGAGGAGAGAGCCAGGCAGGAAGCAGCAGCCAAAAAGGCTGCGGAGGATGCTGCCAAACAAGAGAAAGGAGGTGAGAAGCAGGCTGGCTCACAAGATGC AACAATGACAGAGCGTGCCAGTGCAGCAAGTTCGGAAGCTGAGACTAAGGCAAACGACTTGATGGACGATGAGAATGCTCTGCTAGAGCAGGCACTTGCA ATGTCAATGGATGATCCTGTCATTAGCCATGATGTGAAAGATACAGATATGTCAGAAGCAGCTTCCGATGATCCTGAGTTGGCTTTAGGTTAGTTTCTAT GCTGTTTATGCACTCTTCATGTAAGAAGTACTGAGCACAGACATGGGACATGACATAGATGTTGACAATGCATTATATAAAACTATGAAGTGTCCCATTA TGCACTGAAGTGTCATGTTATGTCTGATATGTATAATATGCATCCATCATGTACATGGACATAGCTCCTTTTTTAAGTAGCTATTCATGGTTTTTCCATA AAGTGAGAGTGTTGAAAGTATGTTTGTTGCATCTTGTATTTTCTATGAGAAATTCCTTGTTTATAGTTATATAGTTTGTTTGATATGAACTGGTTCTGGA ATTTAGGAAATTTACTCAGTTTTTCAAATTTCCACATAGTGAAGAAAAGATTTCTGTATGTGTTTGCACTCCAGTGGAGTGAAGGGAGCTCTTACTCATT TTGGTTTGAAGATTTCAATGCATTGGGATTGTTTAATATACATTTACATAATTAACCCACTTGTTTTAAGGGCTGGCCTTAGTTGAAATTAGTTTGCATC TTCTTAGAATATACGACTAGGGAAACCTTTGGTGGTTCTTTTAACCTTTGTTATTTCTTGTCATTTGTGCATGGAGCTCTCCAATTGTCCGTCGCAGATA GTACAAAGGATGCAGCAAGCCAGTCAGAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_188584; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_397199
| Blastp | 26S proteasome non-ATPase regulatory subunit 4 homolog from Arabidopsis with 68.67% of identity |
|---|---|
| Blastx | 26S proteasome non-ATPase regulatory subunit 4 homolog from Arabidopsis with 65.66% of identity |
| Eggnog | 26S proteasome nonATPase regulatory subunit(COG5148) |
| Kegg | Link to kegg annotations (AT4G38630) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019444843.1) |
| Pfam | von Willebrand factor type A domain (PF13519.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |