| Id Trinity | TRINITY_DN51960_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_399939 |
| Sequence | TGAGAACAATACTTAGTTCATTTCCGGTAGGGTGAGGGGATACCCTTCGTTATACCAAAATTTTTAGCATTTTTCTTTTTTACACTTTTAGTTTGATATT TGTGTTTCTAATTAAACAGTGTATTAATTTATACTTAGTATCATAGCCATGTCTCTCTATAATTTTTAAATTTTGTTTTATCCCTGCATCCCTGTCGTTT TGGACTGTGTTTCCTAGCTTTTTGAGCCAAAACAGTAGAAATAAAAAATTGGAGTATGAAAAATTTAAGCATGTGGTGGAATCAATGTGTTGTTCTTGTG CTAATTCTATTCATTCTATTTTATTTATGCATAGACTTTCTTTTTTGCTATGGTTTTATAATGAGCAATTTCTTTATACCAGGAAAATCCTGTTAGCTCT ACTGTGCAACCCACCCCTGCTATAGAGTCTACTGCAGTTCATTTGGTGCACAGAAGTACCCAAGGTGTTCAGGGTGGTTCTAATAATATACAGTTACAAA CGACCAGTCAATCAACTTCACAGGCGAGCTTCGCAAAGAGCAAGTTACCCCGAAAATCTTCTCCGTGCACGGATCACGTCGGCTCAGATGAAAATCTAGT GATAAGTTTCTCTGGTGATGACAGTGGTAGTGACCTTGAACCTAAAAGTAATGCTTCCAGGTTGGGTAGCAATATAAAGCGACATAGCTCATCCTTGGAA AAATCAAACAAGTTAGAGCAAAGTGCTAGAAATGCTCCCAAGGCAATGCCCAAGAAGTTGCCTTTGAGTCGCACATCTATCTCATCAATTTCCAAATTTG GTGGTTCTAATACTAAAGGTGCTGGATCCATGTCATTGGGACAAGGATCACAAGCTAGAAATTTCAATCTAATAAACAAAAAATTAGCGGACCGAGAGCG TGGGCGTGATCAAGGAATGATATCAAATGACAATAAACTTCAGGATTTACGGCATAAGATTGCACTTCGGGAAAGTGAACTAAAGTTGAAGGCAGCCCAA CAACTTAAGGAATCTGCTTCAATTCCGGATAGGGATCATAATGCCGTAAAATTGAAGAATGATGCAGCTAGGAAATATACTCCAGTTTCTTCAGAGGCTG CACAGTTGGAGCCAAAGGAACCAGATACGAAGCGGTTTAAACTCAGCACATCTCGTGGTACCCCTCAAGTTGTTGGTAGTCAACAAGAAGTTGCTGCTAA GAAATCTATATCAATATCAACAGATTCTACCTGGGACAACTGTCATCCTCAGGAGAGAAACAAGGTTGATCATAGCGAAAATGAGATTCCATTAGGTAGT AGAGAGTCAACTGTGATTAGACCACAAAGGCAACCGGAGAAACATGTTGATAATTCATTACAAAATATGCCTTGTAGTTCAACAGACGGTGATGTCAATT ATGGTAGGAATCAGACTGAGAAGAGTAGTAGGCTGCTTGAACCTTCCATTGCTTTGAACAAGAATGCAATGCCGGCAAATATGATTTCCAATAGTGTGCC AAAAAACTTCGAAGTATTAAGTAATGCAGTTCTTTCTAATCATGATGGTAATGCAAATGTCTTGGAACATAGAGGCATAGATTTACAGTCACTTTTTGGA ATGGAAGAGTTGGTAGACAAGGAACTTGAGGAAGCACAAGAGCACAGGCACAAGTGCGAAATTGAAGAAAGAAATGCACTTAAAGTTTATCATAAATCTC AGAGGTCCTTGCTTGAGGCGAATGCTCGATGCACCAATCTTTATCATAAAAGGGAATTGTATGCCACTAAGTTACGATCTTTAATTTTAAGCAATTCCAG CCTCTCTTGGTCTTCAGGGCAGCACCAACATCTTGAGATGGGGCTGGATTACTTACCCAGACATGGATATGAGATACCCACATCAAGCTGTCAGAGGCAG GCCGAATATAATGATACCAATAATCCGAGTTTTGATTCTAATAATCAAGGCATCAATAATGGGTGTCCCAATACATTCTATCACCGTATGAATGGAGCAA ATTTAGGTTCTGAACCTTGCATTGAACCAGATGCCAGTACATCAGAGCCATTGCCTCAAAAGGGTAATACTGCAGATGGAGGTTACTCTCCTTTGGGTGA ATTAGATACATCCGGTAACGAAAATGGAGAAATGTCTCCAGATGGACATGTGTCCACTCATCTTGGTGTTGAAAACCATAGAAACAAAGACATGATGGTC AAACTAATGGACATAGATACTACATCAAATGCGAAACTTTCTGCTGATAGTCCCCAGGATCCCTTGGTTCTTGAAGCAACATTGAGGTCTGAATTATTTG CAAGACTAGGGACAAGAGCTATGATTAAAACTCCATGCAACAACACCGAGCCTGTTGTTGAACTAGGGGCTGAAAATGAGGTTGGCAGTGGGAAAAGTCA GGTGCATTACTGTGTTGTCCCACTCTCTACAGCAGAAGATAATGATCTTAAAGGCATTGAGAGGCATGAAAGGAGTATCTGTCTGTATTCCAATGAGACT CAAACACAGCATAACATTGGTGAAAATTCTTTGAATTCCAATTACAGCGCTGCTTCTGGAGATCAAGGTGGTATTCCTCGTCAAAGTCACTACTCGACAA ATACAATAAACATCTCCTCTTCGATTTTTAGGAGCGCATTTAGTCATCTGAAAGAAATGTCACCATTCAATTCAAATCAATTCCTTAGTAAAAATATTTC CATCCGTGCTAATGATGGTGAAAATGAAAATGCTACTTGCCTCGCTTCTGATGTCACAAAGTGGAACAATATGTTAGCAAACTCAATGCCTGTCACCGTT GGGAATTTACTCTCTGAAGAAAGCTCTTATAGCTGCAGTCCTGCAGTTGATCCATTTTGGCCACTTTGCATGTTTGAGCTCCGAGGAAAATGCAATAATG ATGAGTGTCCTTGGCAGCATGTTAAGGATTATGGAGACGGAAACGTTTGTAAACGTCAGCGAACTGATTCTAATAATCCAGGAGTAAGTAGGTTAGTAGA CGATGATGATACGCATGCATGTTGGAGAGGATCTAGTTTTATTTATCACTGGAGTTAGTCTTGGGGCGTAAAATAATGTCTTATATCTGGAGTAAAGAAT GTCAGGTTTGGATTAGGGTATGCCATATTTGAAAGTCTTGAATACTTGTTTTTTTAATGAGGATAGGGTCCAGTTTTAGTACCTCTACAAGGTAGACTGT AGCAGAAAACTGAAGAGTAACTTCCATAAGTGATTGAGTTCAGTAGTTCCTCATAACATAATTGACTCTAGAGATAGTAACAATTAATATAAAAAAGAGG GGATAATGGATTATTCACCTGTCATTTGATTGTTAGTGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_188905; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_399939
| Blastp | - |
|---|---|
| Blastx | - |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | osa-MIR5538 (MI0019059) |
| Ncbi protein | Link to NCBI protein (XP_019419361.1) |
| Pfam | Putative zinc-finger domain (PF10650.8) |
| Rfam | - |
| GO | - |