Ll_transcript_473329

• Id Trinity: TRINITY_DN52009_c4_g1_i4
• Name Transcript: Ll_transcript_473329
• Sequence: CAAAGCCCCAAAAATGTTAAAGAAAAAAGGAGCACACTATTTTCAGCTTCAATTGCCACCATTATAGCAACTCAATTTTCCCTCTCACTCTCTAACAATG ATGAAGCAAAGATCATCATCACACCACAACCAGAAAACTAGGGCTCAATTATGTTGTTTGGATTGGTATTCCTGTTTACAACTATTCTGGGCAAGAGTGG TCATGCATAAATGGCTTAACTTGGGAACCAATCAGTCTGATTATAGTGCTGACCCTGATGATGATGATAATGATGATGATTTTTATGATCCTGAAAGTGG TTCTTATAATGAAGAGTGGGGAGGACAGTCACAGTTTATGGACAAAAGGGGCAATGAAGCTCCACTCGAACAAAATGATTTTCTTCCAAGGTTAAGGAAG CAAATGTCATCAACTTATAGATCTCAGTATATAAACTCGAAGGAACTGAAGATATGTGTTGGGACATGGAATGTTGGAGGAATACTTCCACCTGATGATC TAGATATTGATAATTGGTTAGGTGTCAACGAACCAGCTGACATCTATGTCCTTGGTCTTCAAGAGATTGTACCGTTAAACCCTGGTAACATTTTTGGTGC TGAAGATACTCGTCCGGTTACAAAATGGGAAAATATTATCAGGGAAACACTGAATAGAGTTCGGCCTTCAGCATCAAAGATAAAATCCTTCAGTGATCCC CCATCTCCATCAAAATTTAAGCTACCACATGATGTCTCAGATACAGAAGAAGAAATGTTACTTGAAAGTGATAGTGACATCGGTGAGGAAGTTCATCCTT TGGGTGAATATGTTTGTGATGGAGGTAGTAATGGAACAATCACAGGTGACATCATGAATACACGTTTATCAGCTTTCGATGCTGCTGATATTCCCAATTC TGGTGTGCCAGTTGAACCTGGCGTCCAGAGACAGTTTTCTTTTCCAAAGAAGTTTGATAGATTACATTCTTTCCACACTGAACGTACCTCTGAAAACATG GACACATCATTTTCCCAACAAACCACTAAACTAACCAGAATGCTTAGTGGGTCTGAGTTGATTGGTTTGAGCTGGCCGGAGCCACCGCTAAATCTTCTAT CTCAGCGAGTATCGGAGAGAGCAACTTTTAAATCCGTCAAATCCTTTGAATCATTTAAGTCTTTAAAAACATACAATTCTTTCAAGCCAATTATGAATGA CATGCTACGGATGGTTTTGCTTCCTGAAATTGACCTTGAAGCTTTAATGAAGCGGAAGAGAAGATCATCATATGTAAGGATTGTGAGCAAGCAGATGGTT GGGATTTTCATCACTGTATGGGTTCGACGAAGCTTGCGTAAGCATATTCAGAATTTAAAGGTGTCAACTGTTGGCATTGGTATTATGGGCTATATTGGTA ACAAGGGATCAATATCTGTCAGCATGTCCATATATCAGACACTTTTTTGTTTCATATGTACCCACCTTACTTCGGGTGAAAAGGAAGGAGACGAATATAA AAGGAATTTTGATGTTAAAGAAATACTACGGAGAACCCATTTTTATTCAGCTTCTTATATTGGACTTCCCAAAAGAATCATTGATCATGAAAGAATAATT TGGTTCGGTGATCTGAACTATCGTATCGACTTACCAAATGTGGAAACAAGAGCTCTCATCTCAAAGAAGATGTGGTCAAACTTGGTTGAAAAAGACCAGC TTAGTCGAGAACTCAAGAGTGGTGGTGTCTTTGGAGGATGGTCAGAAGGCACTTTAAACTTCCCACCAACATATAAATATGAGATTAATTCAGATAAGTA CCATGGAGAGGAGCTCCTGGTTAAGAAGCGTTCACCAGCATGGTGTGACCGTATTCTTTCATATGGCAAGGGGTTGATATTACTGAGCTACAGAAGGGCT GAGCTCAAATTATCAGATCATAGACCTGTGTGTGCCACATATATGGCTGAGGTGGAGGCATTCTGTCCTAGGAAGCTGCAACTAGCCCTAACGTTCACCG ATGCAGAGATTGAAAATGAAGAAGTCATAACACATTTAGGCAGATGGGATTCAGCTTCATAATTCGAGCAGGAACACAATGAATTCTGAATGAGGACTAG TGATATCTGCTGTAACTTCCAAAGTTCATATAGCCATTACTAAGTACTAAATCTATTCATTTGTTCTTTTAGAAAAAAATCATCAGTATACAGGAAACTG TTGTATGATTTGTTTGTTAGGATTTAGAGCTAGTTGGTTAAGTGATTGTATGTAAGATCTTAGGCATCAATTTATTAAAAAGAATAATATTTATGCAATA ATTTATATATAGTCAGTGTACCATTCATTATTCAATGGTAAAGAAAGAGAGTGCAATGTTTTGTCAATAAGCAA
• Tissue: pods
• Gene name: LI_gene_189315;
• Additional information: details;

Expression of Ll_transcript_473329

FPKM

• PAB: 0
• PNAB: 5.2
• PS1: 4.1
• PS2: 2.9
• PS3: 4.1
• PW1: 2.6
• PW2: 3
• PW3: 2.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_473329

• Blastp: Type IV inositol polyphosphate 5-phosphatase 3 from Arabidopsis with 52.87% of identity
• Blastx: Type IV inositol polyphosphate 5-phosphatase 3 from Arabidopsis with 52.89% of identity
• Eggnog: inositol(COG5411)
• Kegg: Link to kegg annotations (AT1G71710)
• CantataDB: Link to cantataDB annotations (CNT0000466)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413065.1)
• Pfam: Endonuclease/Exonuclease/phosphatase family (PF03372.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;