Ll_transcript_473332

• Id Trinity: TRINITY_DN52009_c4_g1_i5
• Name Transcript: Ll_transcript_473332
• Sequence: ATAATAGGTACTTTTTTTCAGTTCCAACAATCATTTCTTCTTTTCTAAAAATCTCACCCTTATTTCAATATACTGTACATCTTAACTTTCTTCATTAATT TTTGTTTGATTTTTATACCAATTTTCAACAGTGATGAAGAAAAGATCACCACACCACAATCAGCTTTTCTGGGCAAGAGTGGTTCTGCGTAAATGGCTTA ACATGGGTAGCAATGAGTCTGATTACAGTGCTGATCCAGTTGATGATGACGACGACGATGAGGATTTTGATTATGATCCTCGAAGTGGTTCTGATGATGA AGAGTGGGGAGGACAGTTGCGGTTTATGAACAATAGGGGCAATGAAACTCCACTCGAACCAAATGAATATACTCCAAGGTTAAGGAGGCAAAAGTCATCA ACTTACAGATCTCAGTATATAAACTCGAAGGAACTGAAGATATGTGTCGGAACGTGGAATGTTGGAGGGAGACTTCCACCCGATGACCAAGATATTGACG ATTGGCTAGGAGTTAATGAACCAGCTGACATCTATGTCCTCGGTCTTCAAGAGATTGTACCCTTAAACCCTGGTAACATTTTTGGTGCTGAAGATACTCG CCCTGTTCCAAAATGGGAAAATATTATCAGGGAAACACTGAATAGAGTTCGACCTTCAGCACCAAAGATAAAATCCTTTAGTGATCCCCCATCTCCATCA AAATTTAAGCCATCAGATGATGTCTCTGATATAGAAGAAGAAATATTACTTGAAAGTGATAGTGACATTGGTGAGGAAGTCCATCCTTTGGATGAAGAAC ACAACATTTATGATGGAGGTACTGATGGAACAATCACAGACGACATCATGAAGGCACATTTATCGGCCTCCGATGCTGTTGATATTCCAGATTCTGGTGT TCCGGTCAAACTTGATTTACAGAGACAGTTTTCTTTTCCGAAGAGGTTTGATAGGCTGCATTCTTTCAACATTGAACGTTCATCCGAAAAAAACATGGAC ACATCATTTTCCCAACAGACCACAAAACTAACAAGAATGCTTAGTGGGTCTGAAAGGATTGGTTTGAGCTGGCCGGAGCCACCGCTACATCTACTATCCC AGCGAGTATTGGAGAGACCAACTTCTTTTAAATCAGTCAAATCCTTTAAATCATCAAAGTCTTTCAAAGCATACAATTCTTTCAAGTCAATCATGAATGA CAGGCCAGGGATGGGTGTGCTTCCTGAAATTGACCTTGAAGCTTTAATGAAACGGAAAAGAAGATCATCATATGTAAGGATTATGAGCAAGCAGATGGTT GGGATTTTCATCACCATATGGGTTCGGCGAAGCTTGCGTAAACATATTCAGAATTTAAAGGTGTCAACTGTTGGAGTTGGTATTATGGGCTACATTGGTA ACAAGGGTTCAATATCTGTCAGCATGTCCATATATCAGACACTTTTTTGTTTCGTATGCACCCACCTTACATCGGGTGAAAAGGAAGGAGACGAACATAA AAGGAACTCTGATGTTCATGAAATACTACGGAGAACCCATTTTCATTCAGTTTCTTATATTGGACTTCCCAAAAAGATCATTGATCATGAAAGAATAATC TTTTTCGGTGATCTCAATTACCGTATCAACTTATCAAATGCGGAAACAAGAGCTCTCATCTCCAAAAAGCAATGGCCAAATTTGGTTGAGAAAGACCAGC TTATGCGAGAACTCAAGAACGGTGGTGTGTTTGGAGGATGGTCAGAAGGCACTTTAAACTTCCCACCAACATATAAATATGAGATTAATTCAGATAAGTA CCACGGAGAGGATCCCAGGGTTGGGAAGCGATCACCAGCATGGTGTGATCGAATTCTTTCATATGGCAAGGGAATGAGATTACTAAGCTACAGAAGAGCT GAGCTCAAACTTTCGGATCACAGACCAGTGAGTGCCACATATATGGCCGAGGTTGAGGCATTCTGTCCGAGGAAGCTTCAAAGAGCCCTAACATTCACGG ATGCGGAGATTGAAAATGAAGAAGTCATAACACATTTAGGCAGATGGGATTCAGCTTCATAATTCGAGCAGGAACACAATGAATTCTGAATGAGGACTAG TGATATCTGCTGTAACTTCCAAAGTTCATATAGCCATTACTAAGTACTAAATCTATTCATTTGTTCTTTTAGAAAAAAATCATCAGTATACAGGAAACTG TTGTATGATTTGTTTGTTAGGATTTAGAGCTAGTTGGTTAAGTGATTGTATGTAAGATCTTAGGCATCAATTTATTAAAAAGAATAATATTTATGCAATA ATTTATATATAGTCAGTGTACCATTCATTATTCAATGGTAAAGAAAGAGAGTGCAATGTTTTGTCAATAAGCAA
• Tissue: pods
• Gene name: LI_gene_189315;
• Additional information: details;

Expression of Ll_transcript_473332

FPKM

• PAB: 0.7
• PNAB: 2
• PS1: 2.6
• PS2: 1.7
• PS3: 1.6
• PW1: 0.8
• PW2: 0.7
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_473332

• Blastp: Type IV inositol polyphosphate 5-phosphatase 3 from Arabidopsis with 55.09% of identity
• Blastx: Type IV inositol polyphosphate 5-phosphatase 3 from Arabidopsis with 52.62% of identity
• Eggnog: inositol(COG5411)
• Kegg: Link to kegg annotations (AT1G71710)
• CantataDB: Link to cantataDB annotations (CNT0000466)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019439385.1)
• Pfam: Endonuclease/Exonuclease/phosphatase family (PF03372.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;