| Id Trinity | TRINITY_DN52028_c3_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_473272 |
| Sequence | GTAGAATCTTATAGCACAACAGCACATGAGTGTCTTCCGACCCTCCTAACCCAAACCCAATTCAGACACACGAAATTGGAAAACCGTAAGAAAAGGGAAA GAAACTTCATCATCTAAAATACCAAAATCCTCTTTACAATCTTTTCCTTCATCTTCTCTCTCTCTCTAGAAAACCCACTCTCTCTAGATTTCCTTCTTCA TCTTCTTCATCTTCTTCATCATGAACCTAAATTAATCACTTGATTTCAAACTTCTTCTATTTTACTCATGGATCTATAACTCACCTACTCCAATTCTTCA TAACTAAGATCCTTTCACTTCAAATTTCATTCAAATTAGTTCTTTCTCTAACCTAGCTTCTACTTTGTAATAACTCCTAGAATTTGAGGTTTCGTTAGAG AGAGAGAGAAAAAAAGAAAAAAAAAAGAAAATGAAAATGAAAATGAAAATCCCTTGTTGTTCGGTGTGTCAAACGCGTTATAACGAGAACGAACAAGTTC CGCTTCTTCTTCAATGCGGTCACGGTTTCTGCAAAGATTGTCTTTCTAGAATGTTCTCTTCTTCTTCTGACGCAACTCTCACTTGTCCGAGATGTCGCCA CGTGTCCACAGTCGGGAACTCTGTCCAGGCGTTGCGCAAGAATTTCGCCGTCCTCGCGCTCGTCCACTCGGCCGCGAACGCGGCGAGTTTGGACTGTGAC TACACTGATGACGAGGAGGAAGCTGGCGGGGAGGAGGAGGATGAGGATGAGGATGAGGAGAGGCGCCGGCTGCGCGGCTCGCAGACGTCGAGTTCGGGAG GGGGTGAGGTTGTGATTGAGGTTGGGGCGCAGCAGGAGCTGAAATTGATGCAGAGGATCGGGGAAGGGAGGAGGGCGGGGATGGAGATGTGGACGGCGGT GATTGGGGGCGGTGTTGGGCGGCTGAGGCATGAAGTGGCGGTGAAGAAGGTGGCTGTAGTCGAAGGGATGGATTTGGAATGGGTGCAGGGGAAGTTGGAG AGTTTGCGGAGGGCTTCGATGTGGTGTAGGAATGTGTGCACTTTTCATGGAGCAATGAAAGTGGAAGAGAGTTTGTGCCTTGTGATGGATAGGTGCTATG GATCAGTTCAGTCTGAGATGCAGCGCAATGAAGGGAGGCTCACTTTGGAGCAAGTCCTAAGGTTTTCGAATTTTTCGTGTTGTACTTCATGATTTAGATA TAGTAATTTTTGGTGTTGGATGGAATTTATTTTGATAATGAAACATGTGTGATCAGTGTTTTAAATTGTGGTCATGGTTGTTGCGGTTAATGCGATTGCG GTCAATGTGGCATTGTGATGCAGATTGCGGCCGTTGTGGTGTGATTTTTTTGTGAGTAAAAAAATATTTTTGATATTGATACATTCTGATGTGGCCCGAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_189483; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_473272
| Blastp | E3 ubiquitin-protein ligase KEG from Arabidopsis with 64.94% of identity |
|---|---|
| Blastx | E3 ubiquitin-protein ligase KEG from Arabidopsis with 64.61% of identity |
| Eggnog | Ankyrin Repeat(COG0666) |
| Kegg | Link to kegg annotations (AT5G13530) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437104.1) |
| Pfam | Ring finger domain (PF13639.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |