Ll_transcript_474180

• Id Trinity: TRINITY_DN52043_c1_g2_i2
• Name Transcript: Ll_transcript_474180
• Sequence: CTCTCCTTTTTTTTTTTACAAGATTGAACGAAAAATTTCCTAGCATTAGATTATTTCTTTATTGAAAACAAAAAATGACATGAGAGATCAGTGAAAATTA ATTCGAATTTGGGAATTGAGATTTGAGTGAGTGGAATCGGCAACGTACCAAAGCAGTAGCTACTGTTAGAATTTAGAAACATGGCTCACGGCGGCGACAA CAAGCGGCGCCGAGTCAACACGGCAAGCCGTCGGAACTCGAAGCCGAAAGGGTTAGCGGCGAAGAAACCAAAATCAAAGCCCTCCGTTTCCTTGAAAAAC CAGATTCGTTCCGCAGAACGCATGCTACTTAGAAAAAATTTGCCACTAGAAGTGAGAGAAGCACAAGAACAGAAGTTGAAAGGACTTAAAAAGCAGCAGG AGATTCATACTCGCCTTGCTGCTGAACGCAAAATTTTCTTGCGTGACAAAAAGATTAAGTTTTTTGAGAGGAGGAAGATAGAAAGAAGAATTAGACGTCT TGAGAAACAGTACCGAACTTCATCTGCCCAGGCCCAAGCTTCTGAAGTGGCTGACCAGCTTTCCAGTCTTAAAAAAGATCTTCAATATGTTATGTACTTT CCCAAGACTGAAAAATATGTTCCTTTATTTACTGGAGGTGATGATTCGGAGATAGCTGACAAGAGAAATGGACTGCGCAAACAGATCGACAATAGATTAG TTGCAGCTGTGGCAAGTGGCAAGGATTTAGAAGAGACAGGCAGTGAGGATGATGGGCATTTGGATCTGAGTGAAGATGATTTTTTCGTTGGTGGGAGTTC CAGTGATGAAGCAGATGCAGATGATGAATGGACAGACAAAAGCACGAGAGAGCAGGCTTCTAGTGCTTCTGGCAAAGCAGCGTCTGGCATGTCCAGTGAT GAAAAAAACCAGAGGCTGATTTCTGCTAGAGCTTTGATGCCTCCTCCTTACCCTTCAAAGAAGAATTTGTCAAGGTTTGGGTCGTCTTCAGGCCAAAATT CATCTATAAAGAGGTCTGAGATTTCCACATCCAGCAACACATCAAATAGCAAAAGCAGCTCAGACTTCAGAGTAAGGGGAGCTTCAGGATTAGGGACGGG TCATGGTAGTAGTTTAAGTTCCAACTCTGATGCTCACAAGCCTCGGAGAAAGAGAAGACCTAAGAAGAAAAAGAATCAGATGATTGGTGCAACGGACTAA GGTAGTGATGGTTGAATGTGGTCAGAATCACGTTGCAAAGTACTCTGGGAATCATGTGGAGAGAACATAGTAACATACTTATCTCATTTACTCTATATAC CATATATGGAATTCAACTTTCTTCATACTACGTTATCAAATATTCAGATTCCTTACAAAGAAAGAGTCTCTTGCATAGTTGCATACCATGTTAGTATAGG AGAGAATGAATGGAAATGATTGTTGATTTTAATGAATCATGTATATGACAGAAGATAACTCATTATGAATTATTCCCAAACACTCATATTATCTAATATT ATTGGGGAGATCAATTTACTCTAAGATTTATTCCTCATCTTAGCCTTCAGTTTATTGAAAATTCAATGGTATCTACTCACTAATTCAAACCATTGGGTTT CTCTAGAATCTTGGAGTAAATTGATCCCCTCTCCTAATATTAATCTAAATTCCAATGTATATTTGTCTGCAACTTAACAAAGAAT
• Tissue: pods
• Gene name: LI_gene_189602;
• Additional information: details;

Expression of Ll_transcript_474180

FPKM

• PAB: 2
• PNAB: 0.7
• PS1: 1.7
• PS2: 1.7
• PS3: 1.3
• PW1: 0.9
• PW2: 0.4
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_474180

• Blastp: rRNA-processing protein efg1 from Schizosaccharomyces with 34.69% of identity
• Blastx: -
• Eggnog: -
• Kegg: Link to kegg annotations (SPAC12G12.02)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449903.1)
• Pfam: rRNA-processing protein Efg1 (PF10153.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;