| Id Trinity | TRINITY_DN52081_c2_g3_i17 |
|---|---|
| Name Transcript | Ll_transcript_474674 |
| Sequence | AACATGTCAAGTTAATCAAAAAAATTAAAAATTCATATTTTTATTTATTTTTTCTTCGTTCTTATTGATTTGGTGTATGGTTAGGGACATGCTTTGGGAC AAGTTATCCTCGTCACGTTAGATGACTATAAAAGTACACTATTAATAACACTGACACACACTCTTCAGTTATTGGAAATGAGAAACACAAAGACTTTAGC ATCAGAGTCTCTCTCCACTTTTCTCTTGTTTTGTTTCTATGGCACACTAATCAATGCTAAATACATAAACTATGATACTGGTTCTAACATAGTTGAAGCA AAATTGAACATTCACCTAGTACCTCATTCTCATGATGATGTTGGTTGGTTGAAGACTATTGATCAATACTATGTTGGATCAAACAATAGTATTCAGGGGG CATGTGTTGAAAATGTGTTGGATTCATTGGTTGTTGCTCTTCATAAAGATCCAAACAGAAAGTTTGTGTTTGCTGAGATGGCATTTTTCCATAGATGGTG GGTAGAACAAAGTCCAGAAACACAAAAAGAAGTTAGAAAGCTTGTGGATGCTGGGCAACTAGAATTCATAAATGGTGGATGGTGTATGCATGATGAAGCC ACAACTCACTACATAGACATGATTGACCAAACCACTTTGGGTCATGGCTTCATCAAGGATCAGTTTAACAAAACCCCTCTTGCTGGATGGCAAATTGACC CCTTTGGACACTCTGCTGTACAAGCTTATCTACTTGGTGCCGAGCTTGGTTTTGAATCAGTTCACTTTGCGCGGATTGATTATCAGGATAGAGCTAAGCG CAAAGGTGATAAGTCTCTCGAAGTTGTGTGGCGCGGGTCAAGAACATTTGGTTCTTCAGCTCAGATTTTTGCCAATGCATTTCCGGTTCATTATAGTGCT CCGAGCGGTTTTAATTTTGAAGTCAATAGTAATGATCCTCCATTACAGGACAATCCTCTTCTTTTCGATTACAATGTTAAACAGCGTGTCGAGGACTTTA TCAATGCCGCTACTACCCAAGCAAATGTGACAAGGACGAACCATATAATGTTTACGATGGGCGACGATTTCCAATACCAATATGCAGAAACTTGGTTCAA GCAAATGGATAAATTAATTCACTATGTTAATAAGGATGGTAGAGTGAATGCCTTGTATTCTACTCCATCTATTTACACCAATGCAAAGAATGCTGCAAAT GTATCATGGCCACTGAAAACCGACGATTACTTTCCGTATGCGGACGGACCATTTTCGTATTGGACCGGATTTTTCACTAGTCGCCCTGCGCTTAAAGGAT ATGTTAGGTTGCTAAGTGGATACTATTTGGCAGCGCGTCAACTTGAATTTTTCGCTGGAAAGAGTTCAACTATATCTCATACTCTTGAACTAGGCGATGC TCTAGGAATTGCGCAGCACCACGATGCTGTCTCTGGCACTGCCAAACAGCATACAACAGACGACTACGCCAAACGACTCGCTATTGGAGCCTCTAAGGCT AAAGCAGTAGTTAGTTCTTCTTTGGCTTGTCTTTCTAGTAAGCAATCCAGTAATCAATGTTCAGCACCTGCATCAGCATTTGCTCAGTGCCAATTACTGA ACATAAGTTACTGTCCTCCAACAGAAGAAAATATTCCAGAAACCAAAAGTTTGGTAATATTTATTCATAATTTTTAGTTTGGAATTTTGATTAAACATTT TATAGAATACATTAATGGTTGATTTTCAGGTAGTAGTGGTTTATAACCCACTAGGATGGAACCGTACTGATATTGTCAGAATACCAGTGAGTATTTATCA TTTGCAATGTGGCCGGAGTAAATTACATTCATGCTTCCGAGTTTTCGTGAAATTAAACAAATTAACCCTAATTAATATACTTACATTAAGCTAACTACCG GCACGAGTGATAAATGTATTCTTTTAAATAAAAAAAAGTGTGATAAATGTAATTAAGATTACAAGTACAAATAGTATAAGAGTTAATGCATATTCACTAT TTTTAATTTGTTACGCGATAATAAAAGAGGTATTTAAACATATCCATGGAATTATCTATATTTTGTAATGAACTAAAAATAATAAATAGGCATTGACTCT TATACAATTTGTATTTGTCTTCACAATATATAATATTTGTTTGTTTAACTTATTTACATCAAACCAATGTTATGAAACCCGAGCCGGACGTCAAACCGGA AGAGGTCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_189895; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_474674
| Blastp | Alpha-mannosidase from Canavalia with 75.91% of identity |
|---|---|
| Blastx | Alpha-mannosidase from Canavalia with 75.91% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_003548841.1) |
| Pfam | Glycosyl hydrolases family 38 N-terminal domain (PF01074.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |