Id Trinity | TRINITY_DN52110_c3_g1_i4 |
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Name Transcript | Ll_transcript_429698 |
Sequence | AAGGAGAGGTCCCACAAACTGTACCTAATTTTCATCATCATCATCATCATCTTCTGCACAATCCCAATGTTCCATGGGATGGTTGGGGCAGTGATGCTGG GAACACATGGACTGTTCCAGAAAGTTGCGGGGCTAACAATCTGAATGTGAAAGAAGAAATGGGTTGGAAACTTGGGCAGAGAGAGGCAAGTGTGCTAAGA TACAAAGAGAAGAGGCAAAGCCGACTCTTTTCTAAGAGGATCCGCTACGAAGTTCGCAAGCTCAATGCTGAGAAGAGGCCTAGGATGAAGGTACTATTCC ATAACTATAACTATTCATTGCTACTATTCATTTACATGGCTATAAACTTCATGCAGGAAATATGCACAAATTGCACACTATGAGTAATTGAAGAAAATAG TCATTCTTCTTTGGCACTTGAGCGAAGACACTTAAAATGTAAATTTTAAACCTATTCTATCAAATTACATGGAGTGCTCGTTTGGTCGAAATGATAGGAT AGTATGTCTTGTCCTGTTGCAATCTAGAGTTTAGCGAGCCAACTGGATATGATAGCCTATCCTATCATGTTCACCATTGCGTTAGAAACGGACATGATAG GATAGTGCAGTTTTTTCCATCATATACTACACTGGAACACCATTGTCATCACCACACTATCACTATTACATCAATACCATAATTATCTGGTGCGCACCAA ACATTAGACATGATAAGAGTATACCCTATTTTGTCCATCAAATGTGTCTTGACACTCTAATTTATTAAAAGGTAGAGGATATTGCAGTTTTTAAAGTTTG ATCAAGTTTTTATGAGTTAATATAACATATGCTAGTGCTCATGAAAAGGGTATTGTATTTTTTTCCCTAAAGTTGTCTAACTACCCTTATTCTATAAATG TAAAGGAAAAAATTGTACTGTATCAAAATCTAAATCATATAAAATTGAAATAGATTCTAACTTCTACATTCAAGAGCTTACCTTCAATAGGATGAATAGA AAGCTATATGTGCCACTTCCAACTCTCCCATAGACAATGTACAAGTACTTGCTATTTTTTTATGAAAGGCACTCAAGCTTTCATGCGTGACGCGTCAAAT ATTAATGATGTATGTGTGATTGTGTGTTCTAACTCTAGTTATGGTGTGCCTCGATGGAAGAAAATGTTGAGATAGAGGAGTTGAATTGAAAAAAAAAAGG TTTTAACTAATCATTCCCTCCCCCTCTTTTAGTTTTTCCCTATTTTGTTCATCTAGATGAGTTACCTGGAATGTGGTATGGGTCTGGTACATGGTTCACT TGGGTTGCAGTGAGTTCAATACGTGATACATAGGTTAAATGAGAGAATCATGTTACTACGATGTTCATGCAAGTTTTAATACCACCTTTCTCTTATATAG CTAATTGAAACACAAAAGGTCCTATATTTATATGGTTATAATAATGTTCATGACATATATGTGATCTTTAATAAATTTAGGTGATTCTATGCCTACAAGC TTTGTGCTCTCATGAGAAACTCTTCTTACTTCATATCCTAGAATCTTCTAAACTAAACACTTGCCAAACATGCAATGACATAGTTCATTTCATCATAGGT TGCATTGCTACCAAAGTTTATCTATCCAATTCAAATGTCGTTCCGGGAAATTATATTGCATGATCACGACATTGTTACAACCTAAAGACGTATTATTGCA ATATTAGAGTTCTCAAGATCAAAAGTATTTTGCTGGAAATGGCCAATAAATTGTAGACATGACACAGTATTAGAGATCCCATACAGTAGTGTAGAAAATA TTTCGGAGAGAAAAAAACAAATGTTTGCATATTCTAATTTGCTTGATTACTTAATTCTGTTAGGG BLAST |
Tissue | pods |
Gene name | LI_gene_190136; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_429698
Blastp | Zinc finger protein CONSTANS-LIKE 7 from Arabidopsis with 78.57% of identity |
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Blastx | Protein CHLOROPLAST IMPORT APPARATUS 2 from Arabidopsis with 78.57% of identity |
Eggnog | Transcription factor(COG5641) |
Kegg | Link to kegg annotations (AT1G73870) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019458815.1) |
Pfam | CCT motif (PF06203.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |