Ll_transcript_429377

• Id Trinity: TRINITY_DN52170_c1_g1_i2
• Name Transcript: Ll_transcript_429377
• Sequence: CAAAGAGTGTATCCCTCCACGAACATTATCCAAGACACTGAATATAGAGAAGGGATAGGATTTAGGATATAGCACATTGCAAAAGAGAGCAACAACAATG GCACTGTTATGTGGTTCAACTTCTTTAACCTTCCCTTCAACTTCTCTCTCTTCTCAATTCAAGAATGCTACTTCTAAATCTTCTTCCTTTTCCTCCTTCC ATTTCTCACTACCAAATCTTTCATTATCATCTTCTTCTTCGCTTTCTTATTCTTTTCAGACCCAGTTCCCTTCCACAAATTTCTCTCTCCATTCCCAGCT TCAGGAACAAGAACCCGAACTAGAACTGGAACAGGAAGAAGAAGAAGAAGTAGAAAATGACCCACGTTTCATGTGCGTCGAACCCGAACCTCGATTCAGT GGCCCGGATATTTGGAACACAACCTGGTATCCAAAAGCTGCAGATCATGTGAATACAGAGAAAACATGGTATGTTGTTGATGCTACAGACAAAGTTCTTG GAAGGCTCGCGTCAACGATTGCTATTCATATCAGAGGAAAAAATCTAGCAACCTTTACTCCCAGTGTTGACATGGGTGCATTTGTAATTGTGGTGAATGC AGAAAAGGTTGCTGTATCTGGGAAAAAGAGGACCCAAAAGGTTTACCGGAGGCACTCTGGACGACCAGGTGGAATGACAGTAGAGACATTTGCCCAGCTG CAGAACAGGATTCCAGAAAGAATTATTGAGCACGCTGTTCGTGGCATGCTTCCTAAAGGAAGGCTTGGCAGAAGACTATTCACCCACCTGAAGGTCTACA AGGGCCCAGAGCATCCTCATGCAGCGCAGAAACCCATTGACTTGCCTATAAAGGATAAGAGAATACAGTTGGTGAGATAGGTTTGTAACTGAGACCATGG AATGAAATATAACAGGCATAGATTATTGTCTTATATCCATTTCAAAGAACTTTGAGTTTCTTGCTTTGACTGCTACCTTGCTCAGCATTTGATGTTTCTA TTGTCTGTAGATGTATTTGATTATTGTCTTGCTTGTTTTTATTGAGGCCCTTTTGGTTTGAGTCTTAGATATGGAATGTTTTAATAGTATGCTTTCAAGT TTATGGCAACATTTACATTTGAAGGAAATCTTTCGTTCCTTTTAA
• Tissue: pods
• Gene name: LI_gene_190621;
• Additional information: details;

Expression of Ll_transcript_429377

FPKM

• PAB: 23.9
• PNAB: 113.6
• PS1: 54.1
• PS2: 48.3
• PS3: 46.7
• PW1: 94
• PW2: 72
• PW3: 57.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_429377

• Blastp: 50S ribosomal protein L13, chloroplastic from Arabidopsis with 82.18% of identity
• Blastx: 50S ribosomal protein L13, chloroplastic from Arabidopsis with 84.02% of identity
• Eggnog: This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly (By similarity)(COG0102)
• Kegg: Link to kegg annotations (AT1G78630)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413784.1)
• Pfam: Ribosomal protein L13 (PF00572.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;