Ll_transcript_304830

Id TrinityTRINITY_DN52212_c4_g1_i4
Name TranscriptLl_transcript_304830
SequenceCTTCCACACGCACTTTTTTATCTCTCTCGAAACCTCCATTCCATTACACTCTTCTATCAAACAACACAACACCGTTTCCCTCTCGCCCGTTCCCTTCGTG AATGGCAACAAGAAGATTATCAAATCTAACTAAATCCATTTTAGCTTCCTCGCACGCTTCTAGAACATTCCACAAACCTCTCTCTCGTTCACGCGCCGCC GCGCGTGTCTTCTCTTCATTCCCTCACCATGTCTCTGCTTCGAAGATTATCGACACCGATGTTGCCTCCGCTAAGTTCTTATCGCACTCTTTCACGCGCG GATTCCACGCTTCTAATCCCTCTTATCGATCAGCTAGTAGCGGTGCTCAGATTGCACAGACAGAGTTCACAGATATGGCATGGGAGGGCATTCTTGGTGC TGTGGATTCTGCGCGAGTTAGTAAGCAACAAATCGTGGAATCTGAGCATTTAATGAAAGCCCTCCTAGAGCAAAAGGATGGTTTGGCTAGAAGAATACTT ACTAAGGCGGGATTGGACAACACGTCCGTGCTACAGGCTACGGACAACTTTATAGCTCAGCAACCAAAGGTGTGTTTTCCGGTGATAGATTTATCAGTAT TTCGTAAAAAATTATCAATGCTTATTTCATTTAGCAGGTGACAGGTGACACCAGTGGTCCTGTGATTGGTTCACATTTTAGCTCCATCTTGGACAATTCT CGGAAGCACAAGAAAGAAATGGGCGATGATTATGTGTCTGTAGAGCATCTTTTGCTGGCATTTCCTTCAGATAAGAGGTTTGGTCAACAGTTATTTAAGA ATCTTCAGCTTAGCGAGAAGGCTTTGAAAGATGCCATCCAAGCTGTCCGTGGAAGTCAAAGAGTGACTGACCAAAATCCTGAGGGGAAATATGAGGCATT GGAGAAGTATGGAAATGATCTAACTGAACTTGCTAGGCGTGGCAAGCTTGATCCTGTCATTGGTCGAGATGATGAAATTCGGCGCTGTATCCAGATATTG TCAAGGAGAACAAAAAACAATCCAGTTATTATTGGTGAACCTGGTGTGGGGAAAACGGCAATTGCTGAAGGGTTAGCTCAACGTATAGTGCGCGGAGATG TTCCTGAACCATTGATGAACCGTAAGTTGATCTCCCTCGATATGGGTTCATTGCTAGCTGGTGCAAAGTTCCGTGGAGATTTCGAGGAAAGGTTGAAAGC TGTCCTAAAGGAAGTTACAGCATCAAATGGGCAAATAATTTTGTTTATTGATGAAATTCACACTGTTGTAGGTGCAGGGGCTACAAGTGGTGCAATGGAT GCTGGGAATTTGTTGAAGCCAATGCTTGGACGAGGTGAACTTCGATGTATAGGTGCAACTACGCTGAATGAGTATAGAAAATATATTGAGAAGGATCCTG CACTTGAGCGTAGATTTCAACAAGTTTTTTGCTGTCAACCATCTGTTGAAGATACAATATCCATTCTTCGTGGGTTGCGTGAGCGCTATGAGTTGCACCA TGGAGTCAGAATATCAGATAGTGCACTTGTTTCAGCAGCAGTTCTTGCAGATCGATACATCACGGAACGCTTCCTGCCTGACAAAGCCATTGATCTTGTC GATGAAGCTGCTGCAAAGCTGAAGATGGAGATTACCTCAAAGCCTACGGAATTGGATGAGATAGACAGATCGATCTTGAAATTGGAGATGGAAAAACTGT CTCTGAAAAATGACACTGATAAGGCATCTAAAGAAAGATTAAGCAAGCTTGAAAGTGATTTGAATTTACTCAAGCAGAAGCAAAAGGAATTAGCAGGACA ATGGGACAGCGAAAAGGCTTTAATGACTCGGATAAGATCAATCAAAGAAGAGGTAGTGTTTAGTCTATTGGACACCATTATCAAATACTTTACACTGTTT TATATGCTGGTAGAAAGTAGCTATCTGGTTATTATTTGTTACTGGGGTTGTGTGGACCTATTTTTCTTGTCCGGCACGATCTCTATTTCTCAGTGTATGC GTCTGTGTAACATATTAACCTAATTATTCCCATCATTAAATTTCTCTAACACCTTTTTTGAGCATATGTAGATTGATAGAGTCAACCTAGAGATGGAAGC TGCTGAGCGTGATTATGACCTGAACCGTGCTGCTGAGCTTAAGTATGGAACTTTGATGTCCCTTCAGCGCCAATTGGAAGAAGCTGAAAAGAACCTAGCT GAATTCCGTAAATCCGGGCAATCTTTACTTCGAGAAGAGGTCACTGACCTTGATATTACTGAGATTGTAAGCAAATGGACTGGTATACCATTATCAAATC TCCAACAAACAGAGAGAGAAAAGTTGGTCTTTCTGGAACAGGTTCTTCATAAGAGAGTGGTTGGTCAAGATATTGCTGTAAAATCAGTGGCTGATGCAAT TCGCCGTTCAAGGGCTGGATTATCTGACCCAAATCGGCCAATTGCAAGCTTCATGTTCATGGGTCCAACTGGTGTTGGCAAAACCGAGCTAGCCAAGGCT TTGGCTAGTTACTTGTTTAACACAGAAAATGCTCTTGTTAGAATTGATATGAGCGAGTACATGGAGAAACATGCTGTTTCACGTTTAGTTGGGGCCCCTC CTGGTTATGTTGGTTATGAAGAAGGTGGTCAGCTAACTGAAGTTGTCCGGAGAAGACCTTACTCTGTCGTACTATTTGATGAGATAGAGAAGGCACATCA TGATGTCTTCAACATCTTGTTACAGTTGCTGGATGATGGAAGGATTACTGATTCTCAAGGAAGGACTGTTAGCTTCACAAATTGTGTTGTGATTATGACT TCAAACATTGGCTCCCATCACATACTTGAAACCCTTCGTAGCACACAAGACGACAAAGTTGCAGTTTATGATCAGATGAAAAGACAAGTTGTCGAGTTGG CTCGGCAAACATTCCGCCCTGAGTTCATGAATCGTATTGATGAATATATTGTTTTCCAGCCTCTGGATTCCACACAGATCAGCAAAATAGTGGAGCTCCA GATGGAACGAGTGAAGAACAGGCTGAAGCAGAAGAAAATTGATCTTCAGTACACCCAAGAAGCTGTTGAACTTCTTGGTGTATTGGGTTTTGATCCAAAT TTTGGGGCAAGACCAGTTAAAAGAGTGATACAACAATTGGTCGAAAATGAAATTGCAATGGGAGTTCTAAGGGGAGATTTCAAAGAAGAGGATTCAATCA TAGTTGATGCTGATGTGACTCCATCAGCCAAGGACCCTTCTCCCCTAAACAGACTGCATATTAAGAAGCTGGACAACCCTGTTGCTGATGCCATGGTTGC CAATGACTAATTTTCCCCATTGGGTTTCTCATGAAAGCTTCACAATGGTGAGTTAAGATAACATAGTTCATACTTTTTTTGTATAGTGAATAGTTATGAT AATTCCTTAGGGTATGAACTCAGTCCTTGTGTTTTATTTTAGGCCATGTTTTCCCACTTTGGGTAATAAGATTATTCTTTTAAAGGCTCTGTGAATTTGG AGTTCTCTGTTTTTTTTATATTCGGCTCTTACTCCCCTACTTTATCT BLAST
Tissuepods
Gene nameLI_gene_190947; 
Additional informationdetails; 

Expression of Ll_transcript_304830

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_304830
BlastpChaperone protein ClpB4, mitochondrial from Arabidopsis with 82.92% of identity
BlastxChaperone protein ClpB2, chloroplastic from Oryza sativa with 61.79% of identity
EggnogATP-dependent CLP protease ATP-binding subunit(COG0542)
KeggLink to kegg annotations (AT2G25140)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_003522428.1)
PfamAAA domain (Cdc48 subfamily) (PF07724.13)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;