Ll_transcript_304839

Id TrinityTRINITY_DN52212_c4_g1_i6
Name TranscriptLl_transcript_304839
SequenceCTTCCACACGCACTTTTTTATCTCTCTCGAAACCTCCATTCCATTACACTCTTCTATCAAACAACACAACACCGTTTCCCTCTCGCCCGTTCCCTTCGTG AATGGCAACAAGAAGATTATCAAATCTAACTAAATCCATTTTAGCTTCCTCGCACGCTTCTAGAACATTCCACAAACCTCTCTCTCGTTCACGCGCCGCC GCGCGTGTCTTCTCTTCATTCCCTCACCATGTCTCTGCTTCGAAGATTATCGACACCGATGTTGCCTCCGCTAAGTTCTTATCGCACTCTTTCACGCGCG GATTCCACGCTTCTAATCCCTCTTATCGATCAGCTAGTAGCGGTGCTCAGATTGCACAGACAGAGTTCACAGATATGGCATGGGAGGGCATTCTTGGTGC TGTGGATTCTGCGCGAGTTAGTAAGCAACAAATCGTGGAATCTGAGCATTTAATGAAAGCCCTCCTAGAGCAAAAGGATGGTTTGGCTAGAAGAATACTT ACTAAGGCGGGATTGGACAACACGTCCGTGCTACAGGCTACGGACAACTTTATAGCTCAGCAACCAAAGGTGTGTTTTCCGGTGATAGATTTATCAGTAT TTCGTAAAAAATTATCAATGCTTATTTCATTTAGCAGGTGACAGGTGACACCAGTGGTCCTGTGATTGGTTCACATTTTAGCTCCATCTTGGACAATTCT CGGAAGCACAAGAAAGAAATGGGCGATGATTATGTGTCTGTAGAGCATCTTTTGCTGGCATTTCCTTCAGATAAGAGGTTTGGTCAACAGTTATTTAAGA ATCTTCAGCTTAGCGAGAAGGCTTTGAAAGATGCCATCCAAGCTGTCCGTGGAAGTCAAAGAGTGACTGACCAAAGTACAAATTTACACTCTATGATTCT TTATTTCCATGAGGAAAACATGATTTGTTCTATCTTATTATAATATTGGTGAAAATTGTTAAACTGGTATATATGCAAGGTTCCTCTTGTTTCAATTGGC TTCATGATGTGACCCTAGAGCATGTTTGGCGTCCATTTACTTGATCCATGACAATTTCTGGTTATGAAATAGAACCTGCATTCATGCTTGTATCATCAAT TCCCGCTTCAAATATGTTTAAGCTGTTACACGAATATTTATATTCATAAAGTTAAACTGGGACTTGTTTTTATAATGTGAATGATACTTTCTATTTGCTG TTGTTAGTTTGTTGGCACTTCTCAGAAACATCTTTTTTCTCCTTTGAAAATAATTGTCTATAGATCCTGAGGGGAAATATGAGGCATTGGAGAAGTATGG AAATGATCTAACTGAACTTGCTAGGCGTGGCAAGCTTGATCCTGTCATTGGTCGAGATGATGAAATTCGGCGCTGTATCCAGATATTGTCAAGGAGAACA AAAAACAATCCAGTTATTATTGGTGAACCTGGTGTGGGGAAAACGGCAATTGCTGAAGGGTTAGCTCAACGTATAGTGCGCGGAGATGTTCCTGAACCAT TGATGAACCGTAAGTTGATCTCCCTCGATATGGGTTCATTGCTAGCTGGTGCAAAGTTCCGTGGAGATTTCGAGGAAAGGTTGAAAGCTGTCCTAAAGGA AGTTACAGCATCAAATGGGCAAATAATTTTGTTTATTGATGAAATTCACACTGTTGTAGGTGCAGGGGCTACAAGTGGTGCAATGGATGCTGGGAATTTG TTGAAGCCAATGCTTGGACGAGGTGAACTTCGATGTATAGGTGCAACTACGCTGAATGAGTATAGAAAATATATTGAGAAGGATCCTGCACTTGAGCGTA GATTTCAACAAGTTTTTTGCTGTCAACCATCTGTTGAAGATACAATATCCATTCTTCGTGGGTTGCGTGAGCGCTATGAGTTGCACCATGGAGTCAGAAT ATCAGATAGTGCACTTGTTTCAGCAGCAGTTCTTGCAGATCGATACATCACGGAACGCTTCCTGCCTGACAAAGCCATTGATCTTGTCGATGAAGCTGCT GCAAAGCTGAAGATGGAGATTACCTCAAAGCCTACGGAATTGGATGAGATAGACAGATCGATCTTGAAATTGGAGATGGAAAAACTGTCTCTGAAAAATG ACACTGATAAGGCATCTAAAGAAAGATTAAGCAAGCTTGAAAGTGATTTGAATTTACTCAAGCAGAAGCAAAAGGAATTAGCAGGACAATGGGACAGCGA AAAGGCTTTAATGACTCGGATAAGATCAATCAAAGAAGAGGTAGTGTTTAGTCTATTGGACACCATTATCAAATACTTTACACTGTTTTATATGCTGGTA GAAAGTAGCTATCTGGTTATTATTTGTTACTGGGGTTGTGTGGACCTATTTTTCTTGTCCGGCACGATCTCTATTTCTCAGTGTATGCGTCTGTGTAACA TATTAACCTAATTATTCCCATCATTAAATTTCTCTAACACCTTTTTTGAGCATATGTAGATTGATAGAGTCAACCTAGAGATGGAAGCTGCTGAGCGTGA TTATGACCTGAACCGTGCTGCTGAGCTTAAGTATGGAACTTTGATGTCCCTTCAGCGCCAATTGGAAGAAGCTGAAAAGAACCTAGCTGAATTCCGTAAA TCCGGGCAATCTTTACTTCGAGAAGAGGTCACTGACCTTGATATTACTGAGATTGTAAGCAAATGGACTGGTATACCATTATCAAATCTCCAACAAACAG AGAGAGAAAAGTTGGTCTTTCTGGAACAGGTTCTTCATAAGAGAGTGGTTGGTCAAGATATTGCTGTAAAATCAGTGGCTGATGCAATTCGCCGTTCAAG GGCTGGATTATCTGACCCAAATCGGCCAATTGCAAGCTTCATGTTCATGGGTCCAACTGGTGTTGGCAAAACCGAGCTAGCCAAGGCTTTGGCTAGTTAC TTGTTTAACACAGAAAATGCTCTTGTTAGAATTGATATGAGCGAGTACATGGAGAAACATGCTGTTTCACGTTTAGTTGGGGCCCCTCCTGGTTATGTTG GTTATGAAGAAGGTGGTCAGCTAACTGAAGTTGTCCGGAGAAGACCTTACTCTGTCGTACTATTTGATGAGATAGAGAAGGCACATCATGATGTCTTCAA CATCTTGTTACAGTTGCTGGATGATGGAAGGATTACTGATTCTCAAGGAAGGACTGTTAGCTTCACAAATTGTGTTGTGATTATGACTTCAAACATTGGC TCCCATCACATACTTGAAACCCTTCGTAGCACACAAGACGACAAAGTTGCAGTTTATGATCAGATGAAAAGACAAGTTGTCGAGTTGGCTCGGCAAACAT TCCGCCCTGAGTTCATGAATCGTATTGATGAATATATTGTTTTCCAGCCTCTGGATTCCACACAGATCAGCAAAATAGTGGAGCTCCAGATGGAACGAGT GAAGAACAGGCTGAAGCAGAAGAAAATTGATCTTCAGTACACCCAAGAAGCTGTTGAACTTCTTGGTGTATTGGGTTTTGATCCAAATTTTGGGGCAAGA CCAGTTAAAAGAGTGATACAACAATTGGTCGAAAATGAAATTGCAATGGGAGTTCTAAGGGGAGATTTCAAAGAAGAGGATTCAATCATAGTTGATGCTG ATGTGACTCCATCAGCCAAGGACCCTTCTCCCCTAAACAGACTGCATATTAAGAAGCTGGACAACCCTGTTGCTGATGCCATGGTTGCCAATGACTAATT TTCCCCATTGGGTTTCTCATGAAAGCTTCACAATGGTGAGTTAAGATAACATAGTTCATACTTTTTTTGTATAGTGAATAGTTATGATAATTCCTTAGGG TATGAACTCAGTCCTTGTGTTTTATTTTAGGCCATGTTTTCCCACTTTGGGTAATAAGATTATTCTTTTAAAGGCTCTGTGAATTTGGAGTTCTCTGTTT TTTTTATATTCGGCTCTTACTCCCCTACTTTATCT BLAST
Tissuepods
Gene nameLI_gene_190947; 
Additional informationdetails; 

Expression of Ll_transcript_304839

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_304839
BlastpChaperone protein ClpB4, mitochondrial from Arabidopsis with 82.92% of identity
BlastxChaperone protein ClpB2, chloroplastic from Oryza sativa with 63.44% of identity
EggnogATP-dependent CLP protease ATP-binding subunit(COG0542)
KeggLink to kegg annotations (AT2G25140)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_014501091.1)
PfamAAA domain (Cdc48 subfamily) (PF07724.13)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;