| Id Trinity | TRINITY_DN52221_c3_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_305953 |
| Sequence | ATTTAATATCTATATATAATAGTATATTATCATTTTTATTTATGTTACTTTTATATTATTTAACAATCAATACTAAATAATAATGTAAGATATAGTTGCA TATCTGAACCTTCTCTGGACCCACCCAATTATGGAATTATGAAATTGGACTGTAATATTGCAAATGCAGCTGCAGGAAAATCTATGGCTTTTGTGGCTTG AAATTGAAAGACTTTCACTCTCTCATAAAATGCTAACAACATAATAGACTCCATTTGTAGCATACATGAGAACTGTGTTGGGTGAGTGGACACATTAAAA AGATAATATTAGAAATTGATGCATCTCGGAAAAAGTTGGACTACCTCCTATTGTAAAAAAAAAGTAGAATTACGGCTTAGGTGGTTTGGACATATGTGGA AGTAACTACTAGAAACTAATTTAAGAAGAGTAGATCAAATGAAAACTAGTCCAATTCTCAAAGAGGAGGGAGTCCGAGAAAAAATCATCGGTGAAATTAC AAAAAAAGACTTAGAATTCAATATTTTGTCAATGAATATGATTTATGATAGAACATTATGATATCATTTGGTCCATGCCCTTTGTTATGAGGTTGTGTTG ATTTTGCCATAGTGATTATGATGACCAATGCTATAATTTTGTGTGCTTAATGGTGCAGTCACACTATGTTTTATTGCTATGTTCCTTCAAAGAACAACTG CAACAACATGTGAGGGTCCATGCAATGGAAGCAGTAATGGCTTGTTGGGAGATAGAGCAATCTTTACAAACTCTAACAGGAGTCTCACCAGGAGAAGGTA CAGGTGCAACGATGTCCGATGACGAAGATGATCAAGTAGAAAGCGATGCGAATATTTTCGATGTTAGTTTGGATGGCACAGATAGCATGGGATTTGGCCC TCTTGTTCCTACAGAGAATGAAAGGTCCCTTATGGAACGTGTAAGACAAGAACTAAAGCATGAATTGAAGCATGTAAGTAATGTTGTGACCTTCAAAATG TTCTTTCATTTAACTAATCTTCCCTTATGACTATCAAGATTTTCTTTAAACTTCAATGATATAGGGTTATAAGGAGAAAATTGTGGACATAAGAGAAGAG ATTTTGCGAAAGCGCCGAGCCGGAAAACTTCCTGGTGACACAACCTCTGTCCTCAAAGCATGGTGGCAATCACATTCCAAATGGCCTTATCCTACAGAGG AAGATAAGGCAAGATTGGTGCAGGAAACTGGTTTGCAGTTAAAGCAGATTAATAATTGGTTTATCAATCAAAGGAAGAGGAATTGGCACAGTAATGCTTC AACCTCTACTGTCTTGAAGAGCAAGCGTAAACGGTAAGTATTCTATTAAGACATGTTATCACTTAAATACTCAAGTCATTACTAACTCATAGTTATATGA TTCCATCAATTAGCCTATATATCCTATACTACCACCTGTGTTTTAAATTGCGGTTTGCGGTTACTACGATTGCGATTATTGTGACCGCCACGATGCGGAT TGCGACCGTTACGGTGTGAATTACTTTGTGAGTAAAAACATATTTTTGACATCGATGCGCTCTGATGCGGCCGCTGCGGTCCAAATACGGTTTGATGTGG TTGCGTTGCGGCCTGTTGCAGTTGCGTCACTGTGATTCAGTGTCATACCGCAATTAGGGTGATGCGGTTGCGGCAGCCACCGCAATATCGCAATATTGTG ATCGCATCACGTGATGCAATCCACAATTTAAAACACTGTGTACCACTTACCAGGTTCATCATAAGCAAAATCTTGTAATAATAAATAATGCAGGGGATAA CAGTATTGATCATTACATGTTGCATGCATGAAAGGGATTCATGGGAAGACAATGAGAAAGACCCACATTTTGTTCTTGTGCTGCTACACAACCAAATGGG GTGACTCAACAGGATTATGATTTTTGTTTACATTTTCATGGTATTGATATATATACATATATGTATATATATATATAATAGTGAGGGTTGGGGTATACAG TAATAAGCTGTTTATTTTTCTGGCTGATTTTGTTTTTGTGCTTTAATTTGGTATGTGGGATGTAGAGGTCAATTTGTTGTAAAAATCAGAAATGGTATAT GTGGGATATCATAAGATTTTACCTGTAATTTTAAACCTAGTTGGTAATTTACTCCCTATATAAACTTTATAATTTCTGAGATTATCCTGTACTTAATGAT TAGTTTAGAAGTTGGATTTTCGAGGGGAAAGGAGGGAAAATGAAGGCTTGTAAGTCATGAAATATAACCATAAGAAGACTCTCAATTTTTTAGGATCGGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_191013; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_305953
| Blastp | Homeobox protein knotted-1-like 4 from Arabidopsis with 87.5% of identity |
|---|---|
| Blastx | Homeobox protein knotted-1-like 3 from Arabidopsis with 86.54% of identity |
| Eggnog | homeobox(ENOG410XPMQ) |
| Kegg | Link to kegg annotations (AT5G11060) |
| CantataDB | Link to cantataDB annotations (CNT0001697) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019447574.1) |
| Pfam | KNOX2 domain (PF03791.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |