| Id Trinity | TRINITY_DN52225_c2_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_304620 |
| Sequence | TTTTTCTGTTAGATAGTCAAACTTTTGGAAACACTAAATAATACAAAAAAAGATTTGATTGATAAGAATGTAGGAGAGAGAATGACTGAATCACATCATA TTGAATCCTAATGAACCTTACTGGTTTCCTATCAGCTTTGATTAGACGCTGTCGTAGAAACATATTCAATCCCGAACTTGACACAGTGTCATCGCCGTCG TGCATCTAATCCATTCGCCACCATCATCAACCATGGATCAACATCACTCCCATCACTACCTCCGCACGAAGTATGCTCCTACCTTTTCCCATCATCACAA CCCTAATCACCTCCCTCCGCCGCCGCAACAACCTTCTCACCCTCACCTCTCTTCCTACCGCACCACTGCTTCCGCTCCCTACCGCAATAACAACTACCCT CCTCAATTTGCTCCCAACTATCCTATCCAACAAGATCGCCCTATCTCTAATAACCACCACCACCCTCACTCCTGTCCCAATTCCCATAGTTTCTCCGATA ACAACGACCTTCCTCGCCGCGCATTACTCCATTTCGATCAATCCTCCTGGAACCCTAACCCTAGAGTCACTTCTGAAAACCGTCATCCGAGGAATTACTC TCAGGTGGATTTTGACATGGAATTGCATCACCGTCTGGTGGATCGTTTGCCGCCACCACCACCACTGCCACCACTGTATCGACCGATAGATAACCTTCAG TTTGATCATGATGATGGGAGTTCCAGGTTGAGAATGGAACATATGGATTTGTATGAGTCTAACCCCAGAGAAAGAGAGAGGGAAGAGTCTGTGTGGGGTC GAGGTGGTAATGGAAACCACCATCCCAGTGATTTTGAACCGAAATATGATTCGCCGAGTCAGCAGGGTATGAGGGGTGTTGATGTTGGTTTGAAACCAGA GGGTTATGTTCGTGTGTATGACGTGGAAAGCGAGGTTGAAGTATCTAGGGGTGACAGTGGCATAAGAGATGGAGGACATGGTGAAAGCAAGAGGTGGGTG AATGAGAGGAATGAACCAAGAGTTTTGCGTGAGTATCCATCGTTTGAATTTGGAAAGAATGAGATTGGTGCTGCTGGAAGAAATGGAAATAATTTTCGGA TAGTGTGGAAAAGTGATTATTATGGCAATGAACTGGGTAAATACAATAGTAGAGGGAACATCAGGGAGGGTGCTCATGAATTTACTCGCACTTCTCCGGA AAAACAGATACAGAAGAAGAGTGCTCTTCTTAGGCTTCAGACGGTTAAACCTAATCGTAAGAATCGTGAAAATGAGAGGTTGTGTTATACTGGCTATGCT GCTGAAATTAACTCTAATTTCTTCAGGGGTAAGGAGCAACATGGGTACTTAGGTCGTGGGCATGGGGTAAAAGCTGAAGAGAGGGAAGAGAGAAAAGGAA GTCCTGTTGAGCTTGATATTTCTTTCGAATCAAATTCTCTGGTGGCCAAGGCTATAGTGCCACCTTCAAGTTCGGCTGTTGTTTGTGATACAAATATGAC TACAGTTTCTTATACAGATATGTGTTCTACAGAAAGGAGGAAAAAGGTTTCGGTCTCTGAGAGTGATTGTTCTGGTTTACCACCGGCTAAACTACCTACT GGTTCTGTAAGTTTAGATAGCTCACCTTGCAAAGCAAACGGCACCTTTAGTTCTGCCAAGGAGTTGAGCTTGCAGAAGAATGTTTCTGATACTTGTTCTC CCCCATGCACCAGTTTGTCCGATATGTCTCATGGTAAAAAAGAGGCGACCCTTTCGAATGTAACTACTAATCTTTGTTCTGAGATATCATCCCCAATAGC TGTGCAGAAAAAGAAATTGGTTAAAAGAGCGATTAAGAAAGTTGTAAAAAATCGTAATTCAACTTTGTCACATTCACCATCAGCGAATACACATCATGGA ACTGTGCAAACAGATAGCCTCACTTCTAAATTACCAAGTTCCCCTGCTTCGGACAAAATAGAAACTTCCATGAAGGAGAAAAGCACCACTGGTGACAAGG TGTCCACAACAGACTCCTTGCACTCTTTACCAAATGAAGGGAATGTGTTCCCTGAATATAGGAAGAAAGGTTTATCTCTGCTGAGTTTTGGGCCACATTC CAGGTCACATGGTTGTAAGACTGGTGAAGATTCTGATATTGGGAAATTAGCCAGGTTTGAAGGCGATGGAAACATTTCAAATTCTCTATCTCGTGTCTCT GCTAGTAATGATTTTGATTGTTTAGTTGCAAATAATTCTGTCCATGAATTAAATGGTAGTACTTCTGAAATCAAGGACGTGGTTTATGATGATAAGCAAT TATGCCAGAATGAAGTGTCTCCATCACTTGTTAACTATTCAAATATAGGATGCCCGCATAATAGTCATCTTGTAGATTTAGGGGATGAAATGAATTGCAG ACTGGTTTGTTCCACTGATAATATAGTTAAAACAGATCTTATAAATACACGTGAGTCTGAAAATGATAGGGTTTATCACTTGAATTCCAATGATCTTACA GGTTCAGAGGTGAATCATACAGATTTACAAGAGAATCCTTCAGGTTCAGTAGAGAATTTCATAGTTTCTGAAAGTGGCAATGATGGCATTGCTGGTAAGG CACTTAGAATCACTCAAAATACAAATTTGGAAAGAAACCAAGATACAGATGTGCCAATTAGTGAAGTGATTGCTATTTCGAGTTCAGTAAACAATGGGAT TCAAGAAGGTCTAAATTGCATACAACATGCTAGTGTACTGAAACAGGGTTCTGCTAACGAATCAGCTAATTCAGAAGATAGTATCACTACTCACTGTTGT GACACTGGAAAACTGGTGTCCCCTAGTGATGCTACCGTATTCCTTGAGAATTGTGACACAGAAGAAACATTGTCAAATTTAAATATTTCTGTTGAATTTG ATACATATAAGATAAAGGAGAGAGAAGTTCAGAGTCATTTAAATATTTTGAGTTCAAAGATAGAGGGCATATCTCCTGACCCAGTAAATCCAGTTAGCTA TGCAAGTTATGTTGATAGAGCCACAAATGTGTTGAAAATGCCAAGTCCTTCACAAGATTTTGATCAATCAGTTAAAAGCTTAGATTTAAACTCGAAATCC AGCGCAGATGAGGTCACTACTCTACATGGGAAAATAGAGGTTTCTGAGACTGAATTTTGTGTTGAAAATAATGGCAATGATGTTGCAAATAAGGTTTCAC GTGCTTCTAAAAGGAAAAAAGTCACTGCTACACACCCAACATTCAGCAACACGGTTGTGGTCACTACATCTTGTGCAGATAATCTCACCAGTTTCAGTGA TAACCAAGCACAGAAGAAAGGAGGAACATTGTCAAGCATGAGTACTCTATCTATTGCTCAGTCAATACCTTATTCAAAGGGTATCGCTAAGTTGCCTGAC AATATTTTGGTTGGATGTTCTTTTGAATCTATAAATGCAGATAGGGGATTATTGAGTTCTGAGCATTCGGAAATACAGCATACAGACATTGCCTCTTATT CACTGTGTGAGAATATGCCCATTCTAAACCTTCAGTTCTCGATGTTGCAAGGTGAGAAAAAGGAAAATATTATTCCAGCTGTGCCTATAAGTAGTACTCA AACTGACACTTCAGTCATTGGAAATAGTAAGAGAAAAAAGACTGGTTTAGAGGTTGTCGAAGAAAGTTACCAATATAGAGACCTTGTTCAAATATCTCCA ATTGCTGATATGGAATCTAATGATCTCAATATGAAAGATGATTTACTACCTCAGCAGAACCTTATGCCCTGTCACACCAATGGTGATGGAATCAATGCCA GTATTTTGGATGTTGAATTGATTGAGGATGTACCTGATGCGCTATCAATTATGTGTTCTAAAGGGATGGCATCTGAAGTGCCTGCTGGGAAGATTTTAAA TTATATCAAATCATCCCAAGATTATTCTAAAGTTAAAGCTCATGGTCTGAGTTCATTTGGTTCAGAATTAAATAGGAGCAAAAATCAGCCAGGTGATGTC ATTCCTAAAACTTTCCAGGGTCATTCTTTTACCTTTTCAAAGACAAAGACATCTGCATCTTCATTCCATATATCAAAACCTCGAACTTGGCTTCGTACAA TAAATACTTCTCATACTTATCTACCTGGAATTAAGCCTTTGGTAGCAACGGTTCCTCCCAAAAGGTCAATTTTAGAAAGGAAAGGGAATACTCAAAATAC CTCTTACATTCGCAAAGGTAATAGTCTCATTAGGAAACCTTCTCTGGTTTCTGCTTCATCTCAAATCTCCTCTGCTAAGCAGTCACCTTCTTTTGGCTTA AATGAATTACCAAAAAACACCAGATCTGAAAGCCAGGTTGATTTGACAGAACCAATCTTGAAAGCAGGAATAACAATTGTTCCTCAGCAGAGGCAGAGAA CACCTCCAGCACCTATTGACACCAATTCAGACGAAAATATGTCTGCCCCATTGGTAGAACCTCCTGAAGATCAAACTGATCCATCAAATAATGGGGAGAG CGAAGTTGAAGCCAATGGTAGAAATATTTCTTCTTTGAAACCAAAGAGAATAGTATATATAAAGCCCAAAACAAATCAATTGGTTGCAACTTCGAATTAT TGTGATGTTTCTGTCTCTACTGATAACAAGACTGGGACTGCCTTCTCTGATGGCTACTACAAGAGGAACAAAAATCAATTAGTTAGGACTACATTTGAAA GTCATATCAACCAGACAGTTGCGATGCCCAATAGCACTGTAAGCTCTGATGGACAAGGGGTTCGTAAGGTTCTTAGCAACAAGAGGTTTAGTAAGAGGCG ATCACATAAGGTTGCTGGGACCTCATGCAAACCTTTAAGAGCCTCATTGGTGTGGACACTTAAAGGAAAAAATTCTTCCAAAAATGTTTGTGACTCATGG TATTATCAAAAGATTTTACCTCATTTGTTTCCATGGAAAAGAACACCATATTTAAGAGGTTTTGTTAATAATTATGCTTCAAGTTCCAATCATAGTTCCT TATCTGCAATCAGGTACTTGAGCATTTGTTACTGCTTATTTATGTGTTTTTCACTTTCATTTGGCTGTGCACTTCAGCAATAATCAATTACTGTTGGTCT TTCAGCAAGAAATTGTTTGTTTTAAGAAAGAGGGACACTGTTTACACTAGGTCGACCCATGGGTTTTCTCTTTGGAAATCCAAGGTATTAGGTGTTGGTA GGTCTAGTTTAAAATGGTCAAAATCCACAGAGAAGCATTCAAAGCTGTCAAATGAGGAAGCCACCCTCACAGTTGCTGCAGTAGAGAGGAAAAAGAGAGG ACAGGAAAGTGCGGCTTGCATTGGTTCTCGGACAAAGAGAGAACGTATATTTCGTATTGGTTCAGTTCGTTACAGAATGGATCCTTCCAGGCGGACACTT AAGAGGATTTCAGGTTTATTTTTTTATTAAATCCTCTGTTACTTGGGTCTTGCATCACAATCTACATTTCAGAGTATGTTTTATTTGTCAAACGGATACA TGCTTTTGGGACATTGGACACATTTCCCCATACTTAAGATATTTTATACAGTGGACACATTTTCACATATTTTAGATGAAAATTTTGCAACTTATATATG TACTGAAAATTGATATCACAGATCAAATATCAACTTGTTGATTGTTAAACCCTGGAGTGGTTGACAATGTCCTTTGGGGATGATGCCATCTCTGATTGAT TATGATCAAGTTTGTTGGGTGTATGTGTTTTTGCCAATTCGATATGTTTTCACATGCTTAGATATTTACCATTGATGAAGTTTGGTATTAGAGTCATGTT TTCAGGTTAGATTGCAAATCTGTAATTTATATGTATGCAACTTTGCATATCATGTATCTTTCTGAAAATTAATTGTGTAACCTTTGAATGAATTTTGGAT ATGATGACATCTTCTCCTGTTATCTATAAGGACAAATTTGTAAGGTGTTATAGTTTCTGAGCCTTTTGTTTTATTTGTTTAAAGAATAATATTATTAGAT GAGAGGAATAAATGTATAAACTATAAAGATACAAAGGATAAGAAGCCCTTCTAAGAAAACACATTAAGTCGTCAACTAAGCAATGCTTGTTAGTTAACTA CTTTGCTTGTCAAACTAAAAATAAGAAAGAGTCCTTCCAATGAAACACAGCAAGTTATCAACAAAGCAGTGCTTGTTAGTCGTTAGGTACTTTGCTTGTC AGTCGTTCGCTAGTTTGCTTCAGTCATTAGCTACTTTGCTAGTCAAACAAAGAATCTCTTTGAAATAGTCATTAGATGAGCATTATGAAGATGTTAAGAG AAACTATTCCCATAGAGAGGCTGCAGCAGTATTTGTCATTCCTTCTATTCTTAAGCATCAAATTACCGCATACATTGCACACCTCTAAAGTGTTCTTCCC TTTCACTCCAAAGGTTCCTGAATTGTTAGTTAAGTATTTGCTTCCAGATATGATGTGAAGAACAATGAACTCAACAATTGTGAATTTTTCAGATTAAATT TAAGTACATGTGATGCAAAGATGCTGGAAGAAAATGCAAATGTATAATTTTTGCAACCTCCAATTTTTCTTATTGTTGATTTCATATACAATAGTGCCAT CAATTAGTCTTTGTTTATAGTTTTGAACGTTTGATTGCCTGTTTAGACAAGGTTGGGGTCTGACGGTATACTCAGAAATCATTAAGCTCCTTTCTTTTGT CGCCATGCCATGAATACTTCATAATTATGCCCTTTGTTCTTTCATTTCATTTTCACTTCTCATTTTGCTGTTATTATATGGTCTGAAATATTTTGCTATC TTTCTCCTAGCAAGTTAACAAGTTCTATCACTACGGCGGTCTTACGAAATCTTGCTTAATGTTCTTTGTAGATGATGAACCCATGTCCTCTGCTTCTGTC CCTTCAGGTTTGACTGCCAAAAGAGCTTACATTCCAAGGAGATTAGTGATTGGAAATGATGAATATATCCGAATTGGCAATGGTAACCAGCTTATTAGAG ACCCAAAGAAGAGAACTCGGAAATTGGCAAATGAAAAAGTTAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_191046; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_304620
| Blastp | Uncharacterized protein At1g21580 from Arabidopsis with 35.92% of identity |
|---|---|
| Blastx | Zinc finger CCCH domain-containing protein 7 from Arabidopsis with 56.25% of identity |
| Eggnog | zinc finger(COG5084) |
| Kegg | Link to kegg annotations (AT1G21580) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019461466.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |