Ll_transcript_306487

• Id Trinity: TRINITY_DN52231_c3_g1_i1
• Name Transcript: Ll_transcript_306487
• Sequence: AATTTATGTATCTATTTCCTCTCACATTTCCCGCGCACTTTCCCCAAATATCTTCTCAATTTCCCGCTTCTACTCTCTTTTCTTCTTCTTCTTTTTTCGA ATTTTAAATATTTAATTTGATATGATATTACACCCTCAAACTACAACTTGGTGCGTGTGTTAACTCTCAAGTCTTAAATTTCATAGCAATTTCACTATTA CTTGGAAAAACTCCATGAACTGTCGCGAGGCTACTGTAGCTGCCACTGCTACAATTATCGGTGCGTTGGCCTCCGCAATCGCATTCCGTTTCTTTTACCG TTCCCATTCATCCAAATCCATTCCCTTTCAAAACCACACCGTCTCCAATAACCGCTCTTCAATCGACCCTTTTGACCCTTCCAAGCGCAAAGGATACTTG TCGTGGGATGATTATTTCATGGCAATTGCATTTTTGTCAGCTGAAAGATCCAAAGACCCTAACAGACAGGTTGGGGCGTGTTTGGTGAGCCAAGATGGTA TTATCCTTGGTATTGGATATAATGGATTTCCAAGAGGTTGTGCTGATGACAAGCTACCATGGGCAAAGAAATCCAGGACTGGGGATCCTCTGGAGACGAA GTACCCGTAAGTGTTTGGTTTCACATGTTCACTCTGCTTGAAACGTTAGTTAGTATGTTTAATTCCAAACATTTGCATTTTGTTCTGCCTTCAATCTTGT GTGTGGTTTAGCTATGTTGTTGTCATTGTATTTTTTTCATTTAACAAGATTTCGTTGAGAATGTTGTGTCTATTTTAGATATGTTTGTCACGCAGAAGTA AATGCTATTCTTAACACAAATCATGCCTCTGCTGCTGGACAAGTATGTTCAACTGCATTCTCTGGTTACCATATCATTTTATGTCTCTTGTTTAATTGAA AAGGTTGCAGCTTCTAGAAATTATTTTCACTGCTAGTTCTTTATGATTTCCTTTTGTAACGACCACATTGATTATTCACACACATTGATCATGTGACCAC TTACAGTTTTACACCAGTTTGCACATTAAAGAAATTTCTTTTAGTTTGCACATTAAAGAAATTTCTTTTAGTTTGCAGGTGAATATGATGAATGAGTTAT GGAAACATTTTTTTAAGCACATGGTGCTAAGAGATTCCTCATTCCTCTTTTTAATTTATGCAGCGGCTATATGTAACCATGTTTCCTTGCAATGAATGTG CTAAAATCATAATCCAGGTCAGTATCCTTCTTCATGAGAATGTGAAGATAGTGTTTCGCGTCCTTATTATGTTACTAATATAGAATAAATCATCTCATAT CATTCATGCTAGTTCTTTCTCCCACGGTCCTGTTATGCATCTTCGGTCAGGTTCCAGTTACAGATGCCACAATGTCATTGCTCAATTTTACTGTGGGACC GTGGGCTGTCTTATATGGTTAAAAAAAAGCTCACAACCTAAATGGTAATGTAAATCACATTGCTATTTAGTGGTAAGTTGATAGAAATTGCAATAATTAA TCAGCTCTTATTTGCTGATAATCATATATTGTCATGGTCTTATTGGTAAAAAAAATAGTAAGAATCTTTGGCACCATTACCTGTTTTGTGGGCACCAGCC ATTATTCACCCAGGACAAAATCAGATGTCCTGTTTATGTACCAATCTATGTGTCACAAACTTATTTTGGTCAAGAAACTATTTCCTTTTAAATAATGAGT TAAATGATTATTTTTAGCCAATAACAAAATTTGATACATGGAGTGGAACACAAAATGGGATAGCATATTTAATCTCTATTCACCCATTAAATGAAAGAAG CCATGGAGACAAAGTAAAAAATGGCAATAGTGAAGTTGGTAACTGTAGAAATGGTGCAGAAGGCTATCAACATAGGCAGTTGGAAATTTTGGCAATCAGA GCTGTAATTTTGCAGTGTGTTTAAATTGCATGAATCCTCTATAAATAGAGGGATTTTCTTGGTTTGAAGAGGCAGGCACAAGCAAAAAATGATACAGGTC TTTGCAAGTGAAGAGCCTGGGTAGTGACAAGTGAGTAAAAAACTAGTGTGTGAGTAAAAAACTAGTGTGTGAGTAAATCCTAAAGAGTGTAAGATTTGGA AATATACATTTGATCTTACAAATTGTAGTATTTGAATAGGATAAGAAGGTCTCACTAGGTAATACTATATTTGTACCTCTTATGTTAGAAGTGTGGAAAC AGTATAATAACTATCTTGTATATGGTGGAATATTTTTCGGAATACATCCTATGGTTTTTCTCGACTTTTCTCTCGGCATCTAAGGGTTAGTTT
• Tissue: pods
• Gene name: LI_gene_191116;
• Additional information: details;

Expression of Ll_transcript_306487

FPKM

• PAB: 0
• PNAB: 0.7
• PS1: 0.2
• PS2: 0
• PS3: 0.2
• PW1: 0.2
• PW2: 0
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_306487

• Blastp: Deoxycytidylate deaminase from Pongo with 61.33% of identity
• Blastx: Deoxycytidylate deaminase from Pongo with 61.04% of identity
• Eggnog: dCMP deaminase activity(COG2131)
• Kegg: Link to kegg annotations (100457791)
• CantataDB: Link to cantataDB annotations (CNT0000426)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463479.1)
• Pfam: Cytidine and deoxycytidylate deaminase zinc-binding region (PF00383.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;