Ll_transcript_305035

• Id Trinity: TRINITY_DN52234_c0_g2_i7
• Name Transcript: Ll_transcript_305035
• Sequence: AAAATCTATCTCATCACTAAAATCGATCATTCTATTTCTATAAGCAATATTGAGAGGAACGATCAGAAAGAATTAATTTCAGTTACTACAATAACATTTC CAACTACTTCGTCTTTCCTCACAACACTGAACTAAGATTATCACCCATGGCGATTGAAAACCCTTTCAATAGCATTTTGAAGAGTCTTCACAAACCTAGC GGTGATGGTGAATTTGGAAAATACTTTAGTTTGCCAGCTCTCAACGATCCTAGAATCGATAGGCTTCCTTACTCTATCAGGATACTTTTGGAATCTGCAA TTCGTAACTGTGACGAGTTTCAAGTTAAAAGTAATGACGTCGAAAAAATTATAGATTGGGAGAATACCTCTCCGAAACAAGTGGAAATTCCATTCAAGCC GGCCAGAGTGCTTCTGCAGGATTTTACTGGGGTGCCTGCTGTTGTTGATCTTGCTTGTATGCGAGATGCAATGAACAATCTTGGTGGCGATTCTAATAAA ATTAACCCCTTGGTACCGGTAGATCTTGTTATTGACCATTCAGTTCAGGTTGATGTTGCAAGATCAGAAAATGCTGTACAGGCAAATATGGAGCTTGAAT TCCAGAGGAACAACGAAAGATTTGGTTTCCTCAAATGGGGTTCAAATGCATTCAATAACATGCTCGTCGTTCCTCCTGGCTCAGGAATTGTCCACCAGGT CAATTTAGAATACCTTGGCAGAGTCGTGTTCAACACAAATGGTGTGCTCTATTCTGACAGCGTCGTTGGAACTGATTCACACACAACTATGATTGACGGC TTGGGTGTTGCTGGGTGGGGAGTTGGTGGAATTGAAGCAGAAGCTACGATGCTTGGTCAGCCCATGAGCATGGTCCTACCAGGTGTCGTTGGTTTTAAAT TATTAGGAAAACTACGAGATGGTGTGACAGCTACTGACTTGGTGTTGACCGTTACTCAAATACTTAGAAAGCATGGGGTTGTTGGCAAGTTTGTGGAGTT TTATGGGGAAGGCATGAGTGAACTAACTTTAGCAGATCGTGCCACCATAGCAAACATGTCTCCTGAGTATGGCGCAACCATGGGCTTCTTTCCTGTTGAT CACGTCACCTTGCAATATTTGAAACTGACTGGCAGAAGTGATGAGACTGTTTCTATGATAGAATCCTATTTGCGAGCTAATAAATTGTTTGTGGACTATA GTGAGCCTCAAGCGGAGAGAGCGTACTCATCATATTTGGAGCTCAATCTTGAGGATGTAGTTCCCTGTATCTCTGGTCCAAAGAGGCCTCATGATCGTGT CCCTTTGAAAGAAATGAAGGTAGATTGGCATGCCTGCCTCAACAACAAAGTTGGGTTCAAGGTATGAAAATTTTGAACCATGTCCATATTTTTAATCCCT AAATATATAAGTAGTATAGTTTATCCCTAGCCTATATGATACCTAAATTTTCACAACTTTACCTAAGCATAATTTTTTATTGGCCCTGCACTCTTGGCAG CACCTCTCAGAGGGAGAGAGAAATGTGTAAGCGGCTAGCATCTTCCTTATTTATATAATTATTTCTTAACATTTTTGGTCTGGTGAAATCATTGTAGTCA AGGGTGTCATGGTGGGCATCAAAATGGTTAAGTGCCTCTTGCTGGTTGTGGTGCATACCTTTGCCACTGTAGTCTGTAGACATACCTTACTGCTTCAGGT GACTCATTTAGTCATTTTTCTTTATTCTTTTTCTAATTTTAAGGCATTTCTTAACACGAGTGAGGTGTACACTTTTTGGTGCCTCCTGCTTTAAGTCATT AAAATCCCTCAGTGCCTTAAGAGTGCTTTCCACCTTGACTGCCTTGGGTGAAATTTGAATCTGCGTTTGCTCATTGCCTCAGTAAAATCCCCAATTTTCC AGGAAGTCAAATAGTGCAATTGATTATATCCTTGTCCAAGCTATATCCTTTGTCATTATTTTTTTTTGCCATGTTACAACCATGAATGTTTTGTTGTCTG AGCTGTATAATATTGCCTTATTACAGGGTTTTGCTGTACCAAAAGAATCTCAGAACAAGGTTGCAGAGTTCACATTCAATGGGACAACAGCACATCTTAA GCATGGGGATGTTGTTATAGCTGCTATCACTAGCTGTACAAATACCTCAAATCCTAGTGTAATGCTTGGAGCTGCATTGGTTGCTAAGAAAGCATGTGAA TTTGGATTGCAGGTGAAGCCATGGATTAAAACAAGTCTTGCTCCAGGTTCTGGTGTTGTAACTAAGTATTTGCAGAGGAGTGGCTTGCAGAAGTATTTGA ATGAGCTAGGGTTTAATATAGTTGGGTATGGATGCACCACATGCATTGGAAATTCAGGGGATATTAATGAAGCTGTTGCATCTGCAATTACCGAGAATGA TATAGTAGCAGCAGCTGTATTGTCTGGAAATAGGAACTTTGAAGGCCGAGTTCATCCATTGACAAGGGCTAATTACCTTGCTTCTCCTCCGCTTGTTGTT GCCTATGCCCTTGCTGGCACTGTGGACATTGACTTCGACACTGAACCCATTGGGATAGGGAAGGGTGGAACAAAGGTCTTCTTTAGGGATATTTGGCCAT CCAGTGAAGAAATAGCAAATGTTGTACAATCCAGTGTTCTGC
• Tissue: pods
• Gene name: LI_gene_191131;
• Additional information: details;

Expression of Ll_transcript_305035

FPKM

• PAB: 0.2
• PNAB: 1.5
• PS1: 2.1
• PS2: 1.5
• PS3: 2.5
• PW1: 0.9
• PW2: 1.4
• PW3: 1.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_305035

• Blastp: Aconitate hydratase 1 from Arabidopsis with 90.37% of identity
• Blastx: Aconitate hydratase 1 from Arabidopsis with 90.37% of identity
• Eggnog: aconitate hydratase(COG1048)
• Kegg: Link to kegg annotations (AT4G35830)
• CantataDB: Link to cantataDB annotations (CNT0000366)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019423390.1)
• Pfam: Aconitase family (aconitate hydratase) (PF00330.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;