Ll_transcript_307019

Id TrinityTRINITY_DN52248_c0_g1_i14
Name TranscriptLl_transcript_307019
SequenceTATGTACTAAATGCTAAACTGATCGTGCACATCCCTCTGCTGAGTCTGCTCTGTCTCTATTTCCTTGTCCTTATCTCTGAAAGAACCTGGGACCCAAACA CAAAATCCCGAATTTGCCCCTACCCAATTTGTCTTATAATATATATGGAAAAAATCCAACGTTACTGGCTTGAAAATATTATCATCATATATAAATAAAT AAACGAAAAACATGTTGCTTAGTTTTTGAATTGCGAACTGTTACGGCGGCGATGGAGGTCACCGGCGGAAGGAACAGACGGTGGGAGGTGGCGGCGGTGG ATCTCACAAAGGCGGCGCAGGAGAAAGGGAGTGATCCTCTGTTATGGGCGATTCAGATGTATTCGAATTTGAATTCGGCGGGAGAGTCGTTACCATCTAT TGAACTCGCTGAGTTTTTGGTTTCTTACATTTGTTGGGATAATAATGTTCCTATTCTGTGGAAGTTTCTCGATAAAGCTCTCATGCTTCAAATTGTTCCA CCTTTGCATATTCTTGCTCTTCTCTCTGTTAGGGTTCTTCCATGCAGGCATGTCCAACCTGCAGCATATAGGCTATATTTGGAATTCATCAAAAGACATG CTTTTGGTCTTAAATCTCAGACAAACAGGCCAGATTATCCGAGGGTCATGAAATCTATAGATGATGTTCTTCATCTTTCCCACATATTTGGCATGTCACA AAGTGAGCCTGGCATTCTGGTGGTTGAATTTATTTTTTCACTTGTCTGGCAACTGCTTGATGCATCGTTGGATGACGAAGGGCTGCTGGAACTTTCACTC GAGAAGAAGTCTAAGTGGGCAACACTATATCAAGAAATGGATCTGGACATGCATGATAATTATAATGATAAGAAGTCTGGACATCATGAGAAATTGAGAA ATGCAAATACCCTTATGGCTATCGAGATGATTGGGCAGTTTTTGCAGGATAAAATATCTTCAAGGATTCTTTACTTGGCTCGCCGAAATTTGCCTGCACA TTGGCTATGTTTTGTTCAGAGGTTGCAGCTGCTTGGAACAAATTCATTAACATTGAAAAAGTCAAGAGATTTAAGTCCTGAGGCACTTCTGCAACTGACT TCAGATACTTCTGTGGTCTTGTCTCGAGAATGCAAAACAAGGTCACAACAGAAGTTCCATACAGTTATGGATTTTGAATATCTTTCTTCTTCAGCATCAC TCTGCCATGGTGCAACTCACTCTGCTCTTTGGATTCCTCTTGATCTCGTGCTGGAGGATGCCATGGATGGATATGAAGCTAGTGCAACAAGTGCTATTGA AATAATAAGTGGTTTGATAAAGACTCTCCAAGCCATAAACAGAGCCTCTTGGCATGACACCTTTTTAGGCCTTTGGTTAGCAACTCTTCGTCTTGTTCAG AGGGAAAGAGATCCTATTGAGGGCCCAATGCCTCATCTTGATACTCGCTTATGCATGCTCTTGTGCATAATGCCTCTTGTTGTTGCTGATCTTATTGAGG AGGAGGAGGAAAGGACACCAATTGATGAAATAGAAACAGACAGTGGTCCTACAAATAACTGGAAAGAGAAGGTTCCAGGAAAGCGTCGCAGTAATTTAGT CACAAGTCTGCAGGTATTGGGCGATTATCAGAGCTTGCTCACTCCACCTCAATCTGTTGTGTCTGCTGCGAACCAGGCTGCTGCAAAAGCAACGCTCTTT GTTTCTGGCTTCTCAATAGGGAGTGCATATGTTGACTGCCTCAGCGTGAAAGAGATTCCAATTAACTGTTCTGGAAACATGCGCCATCTACTAGTTGAGG CTTGTATTGCTCGAAATCTACTCGACACATCAGCATATTTATGGCCAGGTTATATCAAGGGACATATCAATCAAATACCTCAGTGTATGCCAGCTCAAGT ACCTGGTTGGTCATCATTTATGAATGGAGCACCACTTACTTCAGAGATGGTAAATGCTCTGGCTTCAAGTCCTGCTACATGCTTAGCAGAACTGGAGAAA ATGTTTGAAATTGCAATTGGGGGATCAGAAGACGAGAAGATATCTGCTGCTGCTATTCTTTGCGGGGAATCCCTAATTAGAGGATGGAACATACAGGAGC ACACTGCTCATTTCATTCTTAGGCTATTATCTCCACCGGTTCCTCTAGAGAACACTGAAGGAAACAACCATTTGATTGATTATGCTCCAATACTTAACGT ACTCTTTGTTGGAATTGCATCTGTTGATTGTGTTCAAATATTTTCGCTTCATGGTTTGGTAAGTTCAATTCAAACCCTAATTATAAGTCTTGTCAAACAA TGTTATAATTTTTTCTCTTCATACTGAAAATTTCTATAAAATTGAAGATACTTAAAGTGATGGATGAAATAAAAACATTTGGCCTGTCATTTGAGTTTTA ATGGATGTTGAATTCAGGTTCTTAGCTTTAATTGCTGTAGGAGAAGAATAACTGTCCAATATAAATGACGTTACTCAAGTTGAGATTGTTTTGCATACAT TAGAATATAGTGTCTGTGTTGATTGGTTTGGTAATGTCCTGAATGTGGATTAGAAAATTTGTTCCACGGTTTGTTTGTGTTCAGTTTTTTCATGAATGTC GATGTAGAAGAGAAAGTGCATGACAATTACCTATCCTGCTTATGACCTGCACAGTTGTATATAACATATCATATTTTTTTATATGTAGCACATTAGTTAT TATATATGCAGTTAATAGATTATTCTGAATAAAAAAATATTAGGTTTAGGGAGATAAAGCAGGTAAAACAAGGGAGGAGTGCTAGGATCAGACTCTAACA CACTCCTATCAACACACTCCAAGCTATTGATCCACATTCCCACTTTTTAAAACATGTCACCTGATAACCTGCCTTCCCAGTTTACACATACTTCAAACTG TAACCCCCTCACTCGTTCGAAGAGCAACAATTACAGTTTGTTAGATTCACTCTAGGAACTTTATGGGCAAATAATCAATTCAACTGAACCTTCTCCAGGA GCAATAGGCGTAATTTGACTAATTTCCTCTTTAATTGCCATCCTGGCCATCACTAATAGAAAGACCAATTTTTTTTTCCAGAGCCTGGGTGTAATTCCAA ATCCTGATCATATCTTACCCAGATAAGATAACAGGAAGGCCTTGCACCTAAATCGGTGTCAATTGCACAATCCCCCTGCCTTTCAACTTGTTCAAAACCA GCTTCGAAGCCTCATATCCTTAACACAGTTGAGGGCAATTTATATTCCTAAGGGTTTTTCTTAGCTAATTCATCAAAATACTTAAGGGTTTTTCTATCAC ACAATTTCCCAATCAGCTCTTTCTCCTGTTGAACAATCTTTTCTGTCACAATGATCTCATGTTGCTCTTCGTATGAGTTTGTAGAAGATTAAGGTTTTAA GAGTGGGTGATGTGGACCAATAGCTTGGAGTGTGTTAGAGAGTATGGTCCTAGCACTCCTCAAAACAAGAAAGGAATTATGCATTCTCACTTAAATGCAT CCTTTCTATTTTCATCTCTTTTTTGTTCTATTTTACTTTTATGATAGTTTGAATTAGTGCATTTCCCAAATCTACCAACAGGTTCCGCAGCTTGCATGTT CATTGATGCCAATTTGTGAAGTTTTTGGGTCTTGTGTGCCTAATATTTCATGGACACTGACCTCAGGGGAGGAAATATCTGCCCATGCCGTGTTTTCAAA TGCATTTATTCTTCTTTTAAAGCTATGGAAATTTAATTGTCCTCCTATTGAACATGGAATTGGAGATGTACCTACTGTTGGTTCTCAATTAACTCCTGAA TACCTACTATTGGTTCGAAACTCCCACTTAATGTCAGCCGGTAACATCCACAGAGATCGGAACAGGAAGAGGTTATCTGAGATTGCGAGTTTATCATCGC CAAATTCTGTATTTGTTGACTCCTTTCCAAAATTAAAAGTCTGGTACCGGCAGCATCAAGCATGTATAGCTTCAACATTGTCTGGTCTTGTTCATGGAAC CCCTATTCATCAAATTGTTGATGGGCTTCTTAACAGGATGTTTAGAAAGATTAATAAAGGAGACCATATTACTATTACATCTGGAAGCAGTAGTTCTTCT GGACCTGGAAATGAAGATACATCTATAGGACCAAAGTTGCCTGCTTGGGATATTTTGGAAGCCATTCCCTTTGTTGTTGATGCTGCTGTCACAGCCTGTG CTCATGGAAGACTGTCTCCTCGTGAGTTGGCAACAGGTATGTGTGTTTAGGTCAGATAAATCCAAGGGGACACACCAAGTAACTTGAAGAAGTAGTGATG TCTAAAGTACTATAGAGCTCTAACATGTTGGCAAACTATATAAATATTCGCTCAGTAGCTTAACCTTTCAAAATTATCCTTGATGTCTTCACAGCAACCA AATAAGTTCACTTAGATGTTCCTTCATGAATGCATTATCAACAATGTCATAGTATCAGATTTTTTTTCTTATTTTGTTAATATCAGGGCTGAAAGAATTA GCTGATTTTCTTCCTGCATCATTGGCAACTATAATAAGTTACTTCTCTGCTGAAGTAACTCGAGGTGTTTGGAAACCTGTATTTATGAATGGAACGGATT GGCCAAGCCCTGCTGCAAATCTATTGAACGTTGAGGAACAGATCAAGAAGATTTTGGCTGCGACTGGTGTTGATGTGCCTAGCCTTGCTCCAGGAGGCAG CTCACCTGCCACACTTCCATTGCCATTGGCTGCTTTCACAAGTCTCACCATAACCTACAAAGTTGACAGAGCATCTGAGCGTTTTCTGAATTTGGCTGGC CAAACACTGGAGTCCCTTGCTGCAGGTTGTCCATGGCCTAGCATGCCAATTGTGGCTTCCTTGTGGACCCAAAAGGCAAAACGTTGGAGTGACTTCCTTA TCTTCTCAGCTTCTAGAACAGTCTTCCTCCATAATAGGGATGCAGTTGTTCAACTTCTTAAAAGCTGTTTCACAGCTACCCTTGGCATGAATAGCTCTCC TATCTCAAGCAATGGTGGTGTTGGAGCCCTCCTTGGCCATGGATTTAAGTCCCATTTTTGTGGAGGGATGTGCCCTGTTGCTCCAGGAATTCTCTACTTA CGTGTTTATCGGTCAATCAGAGATGTTGTTTTCTTGACAGAAGAAATTGTTTCCATCTTGATGCAATCTGTGCGAGAAATTGTATGTAGTGGTCCGTCAA GGGAGCAATTACAGAAGTCGAAAGCAACCAAAGATGGCATAAAATACGGACAGGTTTCACTTGCCGCAGCAATGACTCAGGTGAAACTTGCAGCTGCTCT TGGGGCTTCTTTAGTATGGCTATCTGGAGGGTTGGTGCTGGTTCAATTATTAATAAAAGAGACTTTGCCCTCATGGTTTATATCTGTTCACAGATCAGGC CAGGAAGAAAAGTCAGACGGAATGGTTGCAATGCTTGCTGGATATGCACTTGCTTACTTTGCAGTGCTTAGTGGGGCTTTTGCTTGGGGAGTTGACTCAT CATCATCGGCTTCAAAACGACGTCGAAAAGTCTTAGGTGTCCACATGGAGTTTCTGGCAAGTGCACTCGATGGAAAAATATCACTTGGCTGTGATTCAGC TACTTGGCGAGCCTATGTGTCAGGGTTTGTGAGCCTGATGGTTAGTTGCACGCCAAACTGGGTGCTAGAAGTAGATGTCGATGTGTTGAAGAGACTGAGC AATGGCTTGAGGCACTTGAATGAAGAGAAGCTTGCACTTGCTTTGTTGGGTAATGGTGGGGTTGGTACTATGGGTGCTGCAGCTGAACTCATAATTGAAA GTGGAAGGTAAGCTTATTCTCCAGCACCTGTGCCTTTTAGTATGCTTATGTACAGTAGTTTCATGTTTAAAAACTTGTGCAGTGCTAAATCTCCTCTTTT GTTTCAAAAGCATCACTTATGAGAATGGAAAATTTTGTATCTGAACTATGCTCAATCTAAGGTAACTTTCTTTCATGTTTGAAGTGATGAAACATTGCAT AGGTAAAGATATGTTAAGTTTTTTATTCATTATTCTGGGGGGAAATAAAACTACCAACTATTTATGAATCTATTAGTATTTTATTATTATATCACTCCAT TGCTAAGGTATATAAGTGATTTGAAATACTGTGTATAAAGTATAATCAATGAACATAGTATTAGACTTGGGTACTATTGTGTCTGAAATGTGAATGGTAT TAATATATTTCTCCAATTGTTTCTAGCACAACTTTGCTAATTAGCAAAAGCAAAATTATTTTCTATTTCCACTTTTCTTTCATTAGTTTTTATTAAAAAA CTTACTATTTTGAAGTTATCAAC BLAST
Tissuepods
Gene nameLI_gene_191231; 
Additional informationdetails; 

Expression of Ll_transcript_307019

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_307019

BlastpMediator of RNA polymerase II transcription subunit 33A from Arabidopsis with 56.48% of identity
BlastxMediator of RNA polymerase II transcription subunit 33A from Arabidopsis with 56.48% of identity
EggnogComponent of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. Involved in the repression of phenylpropanoid biosynthesis. May compete with MED33B for common binding partners or for occupancy in Mediator(ENOG410XPER)
KeggLink to kegg annotations (AT3G23590)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019419371.1)
Pfam-
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;