| Id Trinity | TRINITY_DN52278_c0_g1_i14 |
|---|---|
| Name Transcript | Ll_transcript_307132 |
| Sequence | ATCTAAAAGAAGCCCTAGAGAGTAGAAACAGTGAAATTAGATAAACCACTTTCTTTTCTCTTCTCCACTTCCCAAATCTAAACCACGTTTTTTTATTCAT TTCTTTTCAACAATCCATTTCTTATTACTCACTTTAATTTCTTTTGCATTTCCTTCTCTTCATTTTCTCTCTCTTTTCAGGAAAATTACAATGAAATGAA ACGTGTACCAAATAGTTCATAGAAACCGCATTCGTTTCGTTTTTCTTCTTCTTCTTCTTCTCAAATTAGGGTTTCCATTATCACAACAACGCTAACCCTA TTCTCTTCATTCTCCTCAAATCTTCATTGTTAAGGAAGGTGATTTGTGATTTTGCAGTTGGATATAATGTCGTCGAAGCCGATTCATCAGTGGAAGGTTA CTGAGCTCAAAGAGGAGTTAAAGAGGAGGAGGCTAACTACCACTGGTTTGAAGAATGATTTAGTTAAGCGTTTGGATGAGGCCCTTCGTGCTGAAATGGA GGCTTCTGAGAAGGAAAAGGAGGCTAATGGTTTCGAGGGTGATGGTGATGAAGCTGCAGTGAAGGATTCTGAGACATTTGAAGCTGTTGAGAAGGAGAAT GTCGAGGTGGCTGAAACAATTGGAACAGAAAATGCAGAGAAGGTTTTGGATGCTGTGGTTGATGACAGCGGAAAGAATTACAAGCAGGATGCTGTTACCG ATCTAGTTGACAATAGTGTGCCTGCCTTGGATCAAGATGTTGAATCTACAGGATTGCCTGCTGTTGTTGATTCTGCAAATGTGGGAGAGGACCTAATTAC TCATGCTTCTGTTGTGGAGACCACCACCACCACCGTCACCACAGTCACTGAGAGTGTATGGACGGAAGTAGAAAGCGGTGGTGAAGATTCTCACAGCACA GAAAAAAATATCGAGGGTTCAGGAACCAAGCTGGGGAATGAGGAGTTAAAGGCGCACAACACAGATAAGAATAACGAGGGTTCAGAAACCAAGCTGGAGA ATGAGGAGCCAATGGTGAATAGTGCAGAAAAGAGTAATGAGGTTTTAGGGACAAAGCTGGAGAATGAGGACTCAAAGCCCCAGCTGGAATCTGTCACAAA GCCCCCATACAAGGATCCTGTGCCCAATTCTTCTGTTCCTGAAAACCAGGTATCTGAGGTCAACCCTAGTTTAGTAGGGTCTCAAGTAAAATCTGATTAT ATTTCTAGTGATTCTGTGTCAATTAATCAAAAGAATGAACTAAAGGATACTATAATTACTGATAATGTCAAATTAGAACAAGATATTGTTAGGCCGGAGG TGGTGGAAGAACCATCATCTAGAAATGAACCTGTGTATGATGAATCACATTCAATGGATGTTGGAGAGCTTCATGAGAAAAAACCATCCGTTGAAGAAAA TATCAATGTTGTTACAAGTTCAAACTTGAACAAAACCAATAGCAGTGATGATGTGGGGTATCCAGAAAAATTAAATTTGGACAGAAGTTCTGGTGATGAT TCTATGGAAGAGGATTTGCCTGAGAGTAAGCAACTTGACTCTAAGTTTAATGTTAATGAACTTAGAGACAAAGTGGAGGGTACTGAAGTGATTACCATGA AGGAGGAAAACAACACTGTAGTTGTTGGAGATGGTCAATCTGGAGGAAATAGTGATGCCCACCAAGATATTAACATGAGCCCACTTGTCCTGGCTGAAAA ACGAAGATTCAATGGTAAGCATTGTATTTTATCTTTATCCTCAAAAACAAGCTTTTTCATTTTATTTTCCAGTGTTGTCAAATGGCGGCTATGACGGAAA GCGGTGGCATTGTTTGGCCAAATGCTATTCACTATTTGGATAAACCATTCAAATGGCAGTGCCCACCATTTTCTGCTTTAAGACCGCCATGGTGGTGGCG GCTAATGGCAGAAAAGGTGCTGCTACTTGGCTTCTGAGGGTTTTTTTAGGGCTAAAACTCAAAATTTGGGATTCATGACTCGAAGCCATCATTGTCTGCT TCGTTTGCAAGGAGAATCAAGCCTCTGTCTCGTCTTCGCCTGCTTCCTCTCTCCTAGTTTGTCTGCTTTGTTTTCGTTCAAGGCAGATGCTTTGTCTTCC GCCACGACCGCACAACTTCATTTTCGCTTCAACTCTGTGGGATCTGCTTCATCTTCTTTTACTGATTTGTTTCAACACAGTTAACATGAAATTAGTTAGG CCCAATTGTAGCCCAAACCTTAACTAACCTGCTCTTATATTTTACTTTAACCCTTAGTGAGTATCTTTTTCAATCTGTTAAATTTTAATATTTCTCTGTT TCACTTATTTTTTGAACAAGTCTCTGTTTTCATTATTTACTAGTTATTGATACTGTGATAGTGGGTTTTCATGATTTCTGGTTTGGTTGTGGCAAGATGA AAAAATTACTGTCTTGAAATTATTAGATAAATTAATTCTTATTTTTTAAGGGAAAAGTGCATAAAACATCTCTAAACTTTATGCATTTTGTAAGTAGCCA CCACAGATTATTTTTTCTTCCTAATTACCCCTTAAACTTGATTAGTTGGTGAAATTGGTCCATGTATGGATATATTGTTAAATTATTAGTAAACCAACAG GGAAACCACTGTAATCAGACTCACAATAGTACCAATGCAATTCTACCAAAAAAACTAGTAGCAATGCAACAATTCAGGTTAATAAACATTGCTATTCAGA GGAAATCGCCATCAAAATATAAAATTGATTAAGAAGATGATACATGAATTTGAGAGTTAAAACTTAAAAGTGGTTAATGCATTAACATAATTTTCTTAGC TATTAATTTAACATTATTTTTATGCAGTGACCAATTTCACCAACAATTAAAGTTTAAGGGGTAATTACAAAGAAAAAATAGTTCATAGTGGCTAATTGCA AAAGACATGAAGTTTAGGGTGTTTTTATATAGTTTTCCCTTTTTTTATTTTGTGGTACACTTGTGGGAAAAAACAAGTGACAAATACAAAATAATAGTAA AAAGGATGCGGATATTTATTTATTATTCTTGTCTTCTAGGAGGTATTGTTGGGTTTGTCTTTTCTATTCTATAAATATTATTGTTTCCGCTATTTTCCCC CACCTCTATTGATGGTAGAATTCGCCATTGACAATGCTGATTTTCTGGTTGCTTCCTAAGCACAAGTGGTAAATTATATCTATAATATATGTCGCTTTCC TGGTATGCTGTTGTTATTATCAGTTCTTTGTGTATTTGTTAATCAACCTTATTTCGAACTTTGTGTTACAGAACAAGCATCAGTTGAGAGCACTGAGCCT GCAAAAAGGCAACGTAGGTGGAACACTGAAGCAGTTAAAGGACCAGAACCACAAAGCACTACTCCCAGATCAGCCACTACACCCAAGGGTGAGCCAGTTG CTCTGAAACGCAGCTTCACTAGGTCTGATTCCTTTGCATCTGATGATGCACCTAAAGAACGTGTGGTTCTGCCATCGCAAAGGTCCCCAACTAATTCCCT CAGAATTGACCGTTTCCTCCGTCCGTTTACCCTAAAAGCAGTGCAAGAGCTTCTTGGTAAGACTGGGAAAGTTAACAGTTTCTGGATGGACCAAATAAAG ACCCACTGCTATGTTACTTACTCGTCCATTGAAGAAGCCATTGAGACACGAAATGCGGTGTATAATCTGCAATGGCCTCCAAATGGTGGACGCCTCTTAG TTGCTGAGTATGTTGAGCCTGAAGAAGTGAAGCTGAAGATAGAACCTCCTTCTAGTCAGGCTCCCCCTGTCAGTGCTGGTCCAGCTGTTCCTCCTGCACC ACCTTCACAGCCAGAGCCTTCCCCCCGTCAGCACAGGCAGCTGCCCCCACCTCCAGCCACTCTTCCACCTCCACCTCCATTGTCGAAGACCCCACCAGTA GCAAGAGAGCGGCTTCCATCTCCACCACCCCTTCCTGAGAAAATTGAACCTCCCATCGTCACTCTAGATGATCTCTTCCGTAAAACCATCGCAACTCCTC GGATCTACTATCTACCTTTGTCTGAAGAGCAAGTTGCTGCAAAACTTGCAGCACAGGGTAAGAGCTCCAGGCAGTAGGCATGATTGTCATTGCTAATTGC TAATGCATCATCTGAGACTTAAATTTGTTTAGTTTCGGAACATCATAAACTAAGAGCTGTTTAAGTTGATAGATTTGTGGTATCATTGTGTTTAATGTTA CTTAGCTGGCACTTTTCTTGATACAGTGTGTTTTCTTTTGTTGAATGATAATTTTATATTTGTATTAGTTGCTTTAGGCTATTGGTTTGGCCTATTGTTT CTCTACTTCATGCCCCATGTATGAGGCCTAGCTCTGTTATGAATGTTATTTTGCCAATTACCTTTCATCACTTTGTGTCATTGTGACCCTGGCCTTGGGC ATTTCATATAATTTTTTTTGATGAATATAGTGATGCTGCCATTATTAGTTGCAGGGAAACTAGAATTGTTATGTGAGGAATTAATCATGTTTTCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_191441; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_307132
| Blastp | - |
|---|---|
| Blastx | Apoptotic chromatin condensation inducer in the nucleus from Homo with 45.12% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437594.1) |
| Pfam | SAP domain (PF02037.26) |
| Rfam | - |
| GO | - |