Ll_transcript_486892

Id TrinityTRINITY_DN52374_c0_g1_i11
Name TranscriptLl_transcript_486892
SequenceTGCTTCTGCAACTCACTGCCGTAACCTTCGTAGCAGGAGAAAATATCTCTCTCCCACCTTTTACTCACACCAACGAATCAAAACGCACCGTTTCGCCACC ATGCCTTCTCTTCCCATCTCCAACGACGCCGTTTTCACCAGCGACAAGAAACTGAAGAAGGAAAAGAAAACCAAGAAAAACGACGCCGACAACGACAACG AGAACCACTCTCTAAACGACGCCGTTTCCGTTAAGAAGAGTTCTTCGAAAGAGAGCAAGAAGAAGCGGAAGAAGCTTTCATCTTCTGATGAGGAAGGTGA TGACGATGAAGATGAGAAGAAGAGTGAGAATGGCGATGAGGGTTTGAAATCGAAGAAGAAGAGTAAGAAAGCGAAGTTGGATATGGAAGAGGAAGAAGAG GTTGAGGTTGAACCTGAGAATCCAAACGCGGTGTCCAATTTCAAGATATCGGAACCGTTGAAAGCGAAACTGAAGGAGAATGGAATTGAAGCCCTGTTCC CGATTCAAGCCACGACATTCAAAATTATCCTCGATGGCTCCGATTTGGTTGGTCGTGCTCGCACTGGTCAGGGTAAAACTTTGGCTTTTGTGTTGCCCAT ATTAGAGTCTTTAACAAATGGTATGGCAAAAGCATCGAGGAAGGTGGGCTACGGGAGGACTCCAAGTGTCATTGTGCTTCTACCTACTAGGGAGTTGGCC AAACAGGTGCATGCTGATTTTGAAGCTTATGGTGGGGCAGTGGGACTGGCTTCTTGCTGTTTATATGGTGGAGCTCCATATCAGACTCAAGAGATGAAGC TCAAGAGGGGTGTTGATATTGTTATTGGCACACCTGGCCGCATAAAGGATCATATCGAGAGGGGAAATATTGACCTGAGCCTACTAAGATTCCGTGTTCT TGATGAGGCTGATGAGATGCTGAGGATGGGTTTTGTTGAAGATGTTGAACTCATTCTAGGTAAGGTAGATGATGTAAACAAAGTTCAGACACTTCTTTTC AGTGCTACTTTACCAGACTGGGTTAAGCAGATTTCTACAAGATTTTTGAAACGTGATAAGAAAACTGCTGATCTTGTTGGGAATGGGAAAATGAAGGCTA GCAACAATGTTAGGCATATTGTTCTACCATGTAATAGTTCTGCTAGGTCCCAGCTTATCCCAGACATTATTCGCTGTTATAGCAGTGGAGGCCGAACAAT TATTTTTACTGAGAAAAAGGAGTCTGCTTCTGAGCTTGCAGGGGTGTTGCCTGGAGCAAAACCTCTCCACGGTGACATCCAACAGTCGCAACGTGAGGTT ACACTGGCAGGTTTTAGGTCTGGAAAATTCATGACATTAGTGGCCACAAATGTGGCAGCTAGGGGTCTGGATATTAATGATGTTCAGTTAATTATCCAGT GTGAGCCTCCACGTGATGTAGAAGCATATATCCATCGTTCTGGACGTACAGGAAGAGCTGGTAATACAGGAGTTGCTGTAATGCTTTATGATCCCAGAAA GTCAAGTGTATCTAGAATAGAAAGAGAATCGGGTGTGAAATTTGAACACATATCTGCTCCTCAGCCTGATGATATTGCCAAAGCTGTTGGCGGGGAAGCT GCTGAAATGATTTTGCAAGTGTCAGATAGTGTGGTTCCTGCATTCAAGTCTACTGCTGAGGGGCTTTTGAATAACAGTGGTTTATCAGCTGTTGAATTAC TTGCAAAAGCTCTTGCCAAGGCTGTTGTAAGTCAAATGATCATCCACATTTCTGCATGTCTTCCTTAATATATTTATTTCAATGTACAAAACCCTTAACT TTCGATATTTTGTGTTACCTGGGGATGTGTCGTGTTATTTGCAGGGTTTTACTGAGATAAAGAAAAGATCGCTTCTGACTTCCATGGAGAATTATGTTAC ATTACTTCTAGAGATCGGAAAACCCATCTTCACCCCGTCGTGAGAACTTTGCAATATTTAATTCGGGGCATCTTACTTCATATCATTATCTAGGAAGTTA AATACTTGATAGTTTGGTAGTTTAGATATATTATTTTTTACTGTAGACTTGTTTCTTTAGTTATCAGCAACATTCAAAGTATCAGTATCAGTTCGCGATT GTCATTTACTGGGTCCTGTTTCACCATTCATGGGCTGTTATCAGGTTTGCATTTGGAGTCTTGAGGAGATTAGTGCCGGAGGAGATGGTTAACACAGTGC AGGGTCTTACTATCACTGCAGATGGAAATGCTGCTGTTTTTGACGTACCTGCCAAAGATTTAGATGCATTTATAACCGGTGAAGTTTAACTATTTTTTTG ACCTATGATTTCGAGAATTTAAAAAAATCTTTTGATCATAGATACCTATAGCATCCATCAACTTCCCCTTCCATGAAGGTCGTAATTACTGCTTTGTGTT TGATTCCTTGCTATCCTTTTCAAGCTTTAGCTCTACACTGCTTTGTTTTCATTTTGGGTTATTTTCAGTTGAATTGTTTTGTGCTTTTCAGGTCAGCAAA ACGCTGCCAATGTAAGTCTGGAGGTGGTGAAAGCATTGCCGCGTTTGCAAGAAAGAGACCAATCGAAAGTGGGTAGATATGGCGGCGGTGGCGGCGGTGG TCGAGGGTTTAATGACAGAAGTGGTGGAAATAGATTTGGTGGAAGAGGAGGTGGGAGGAATGGGAGGTTTTCAAATGGTTTTGGTGGTGGGAGAGGTGGG AACAGAGGAGGAAGGAGATGGTAAAGGAGTTAGTGAAGATGGTTCACGAGCTTTATATATAATATGGGGTTGAGTTTTACCCTATAGTTTGTTATTTGTT TATTTATCTGAATTTTGACATGTGTAAGAATTGCATTTCAATATGAATGACAATGATAATGAAGAAAAGAGAAATAGTTTTTTTGGTTACATAAAAAGAG AAGAGAAATGGTTTTACCC BLAST
Tissuepods
Gene nameLI_gene_192200; 
Additional informationdetails; 

Expression of Ll_transcript_486892

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_486892

BlastpDEAD-box ATP-dependent RNA helicase 7 from Arabidopsis with 77.9% of identity
BlastxDEAD-box ATP-dependent RNA helicase 7 from Arabidopsis with 77.99% of identity
Eggnogpurine NTP-dependent helicase activity(COG0513)
KeggLink to kegg annotations (AT5G62190)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019413634.1)
PfamDEAD/DEAH box helicase (PF00270.28)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;