| Id Trinity | TRINITY_DN52471_c1_g1_i13 |
|---|---|
| Name Transcript | Ll_transcript_349099 |
| Sequence | ATAGTAATTCATAAACCCATAACTATCATTTCTCTTCTGTCATTGAAGCAAAAGAAGCAGAAGAAACACACAGCAATGGTTTCAACGGGAAGCAACACTG AATCTCTCTCCTCCAACAACACAAAACAACATTCTTCCTCTTCCGACGACAAACCTCCATCTCCGCTACCTTCCTCAGAACGACAAAAGGTTGATAATGA CGGCGCCGAGTCCGAGAAGCCGGTGCCGGCGGCGGAGAATTCAAAGGACTTGATAACTGTTGAGCCTCCGGCACGTTCCGGCGATACTCAGATCACTTCA GCTGGCGGTGCTGGTGGCAAAGATGACGGTGTGCCTGCCGTGGATGTGACGGCACCGATTGCTGAGGCCAAAGAAGAAGAAGAAACACACACAGCAATGG TTTCAACGAGAAGCAACACTGAATCTCTCTCCCCCAACAACACTAAACGGCCTTCTTCATCTTCCGACGACAAACCTCCTTCTCCTTCTCCTTCGCCAAA ACGACAAAAGGTTGATAATGATGGTGCTGAGTCCGAGAAACCGGTGCCGGCGGCGGAGAATTCCGAGGATTTGAGAACTCTTGAGCCTCCGGCTGATGCC GGCGATACTCAGATCGCTTCAGCTGGCGGTGCTGATGGTGAAGGTGACGTTGTGCCTGCCGTGGATGTGAAGGCACCGCTTGCTGAGGGGCCTTTGCCAA TAATTTTGGTGGCTGAAAAGCCAAGACCTTCTTTCTCTTCATGGAGCATGTATCAGAAGCAGAATCCAAAAACTGATTGTTCAGTTCCCTGGTGCAGGCT TTTAACTCAGTCTTCACAGGATCCAAATGTTGTCATTTGCATGCCGAACTTCATGATTGGTTCGAGTAGAAATTGCAACTTTCTGTTGAAGGATCAGACT ACAAGTGGAATTTTATGCAAGATCAAACATACTGAGTGTGAGGGAAATGCTGTAGCTGTGCTACAAAGTATGGGTAGCAAAGGATCAGTGCTAGTAAATG GGATGCTTGTCAAGAAGAACACTAGCTGTGTGCTTAACTCGGGTGACGAGGTGGTTTTTGGGTTGTTTCTTGGGAATCATTCTTATATTTTTCAGCAACT AAATACTGAAATTGCTGTTAAGGGTGCAGAAGTTCAAAATTGTGCTGGGAAATTTGTGCAGATTGATAGGAGAAATCGAGACCCTTCAGCTTTGGGAGCT GAGCTTAATGGTCTCGAAGGCAACTCAGCTCCAAATGTAGGGGCTGATAAGGCTTCTGATGTTGGAGCAAGCGACAAAAACTCTCCTTTGGATTGTGATC CAGATGATACAGGCACAGAAGCAGGCAATGTATTGGAAGAAAGAAATGGGACGAGGGATACACTAGGTGCATCGACTTCGGGTACGTCTGTGCGCTGTGC AGTTTTTAAGGCAAATGTTGAAGCGGCAATTCTGGATGGAAAAGAAACGGATGTGTCTTTCGACAACTTCCCATACTATTTAAGTGAGGATACAAAAAAG GTCTTGGTGGCAGCATGCTTTATACACCTAAAGCATAAAGAACATGCAAAGTATACCACAGATCTTACAACCATAAACCCTCGTATTCTACTCTCGGGAC CTGCAGGATCAGAAATATACCAAGAGATGTTGGCAAAAGCACTAGCAAATTACTTTGGTGCTAAATTGCTCATATTTGATAGCCATTTGCTTTTGGGTGG TTTATCTTCAAAGGAAGCTGAGCTGCTCAAAGATGGATCCCATGCTGATAAATCCTGCAGCTCCGCCAAGCAAAGTCCTACAGCCACAGACATGGCTAGG AGCATGGATCCATCAACTAGCGACACTGATACACCTAGCTCTTCAAATACACCTACTCCACATGGTCTCGAGTCCCAACCTAAGCTAGAAATTGATAGTG TAGCATCTACCTCTGGGACAGCTAAAAATTGTTTGTTTAAACTAGGTGATAAGGTAAAATATAGCTGCTCATCTTCTGGTACATTATATCAGACATCTTC TTCAAGGGGTCCAACTAATGGAAGTCGTGGAAAGGTTGTCTTGGTTTTTGAGGAAAATCCCTTGTCAAAAGTTGGTGTAAGATTTGATAAACCTGTACCT GATGGAGTTGATCTTGGAGGTGCCTGTGAGGGAGGTCAAGGATTTTTCTGCAATGTCAATGATCTTCGTTTGGAAAACAGTGGTGTGGAGGAACTGGACA AATTGCTTATCAATTCGTTGTTTGAGGTTGTTTACAGTGAGAGCAGAAATGCCCCATTTATTTTATTCATGAAGGATGCTGAGAAGTCTGTAGTAGGAAA CGGAGATCCATTTTCATTTAAAAGTAGGCTTGAAAACCTTCCCGACAATGTGGTGGTAATAGGTTCACACACTCACACCGACAGTAGAAAGGAAAAGTCA CATCCCGGGGGTTTGCTTTTTACGAAATTCGGTAGCAATCAGACTGCCCTTCTTGACTTGGCTTTTCCGGATGGTTTTGGACGATTGCATGACAGAGGAA AGGAAGTCCCAAAGCCAAACAAAATGTTGATTAAGCTGTTCCCTAATAAAGTTACAATTCACATGCCACAGGATGAGGCACTTCTAGCATCTTGGAAGCA GCAACTGGATCGAGATGTCGAGACTCTTAAAATCAAAGGAAATTTACATCACTTGCGCACAGTTTTAGGCCGTTGCGGAATGGAATGCGAAGGACTTGAG ACCTTGTGCATTAAGGATCAGACACTTACAAATGAAAATGCAGAGAAGATAGTCGGTTGGGCTTTAAGCCACCACCTCATGCAGAATTCTACAGCTAATC CTGATTCAAAGCTTGTATTGTCTTGTGATAGCATCCAGTATGGAATTGAGATCTTGCATTCTATACAGAATGAGCCCAAGAGCCTGAAGAAGTCTCTTAA GGATATTGTAACAGAAAACGAGTTTGAAAAGAAGCTTTTGGCTGATGTTGTTCCACCCAGTGACATTGGTGTTTCTTTTGATGATATTGGAGCTCTAGAA AATGTGAAGGATACACTTAAGGAGTTGGTGATGCTTCCTTTACAGAGGCCACAGCTGTTTTGCAAGGGACAGTTAACCAAGCCGTGCAAGGGTATCCTAT TATTTGGTCCCCCTGGAACAGGTAAAACAATGCTTGCAAAGGCAGTTGCTACTGAAGCTGGTGCGAACTTCATCAACATTTCTATGTCAAGTATTACATC TAAGGTTCAATTTGTGCCTCTGGATGTATTTAATCTTACCAATATCAGTTTGTTGCGCATGTTAACTCATGTTCTTGCCCCCTTTTGCTTTAGTGGTTTG GTGAGGGCGAAAAATATGTGAAAGCTGTTTTCTCTCTGGCTAGTAAAATTGCTCCTAGTGTTATATTTGTGGATGAAGTTGACAGTATGTTGGGCCAGAG GGAAAATTCAGGGGAGCATGAGGCCATGCGGAAGATGAAAAATGAATTCATGGTGAATTGGGATGGGTTACG BLAST |
| Tissue | pods |
| Gene name | LI_gene_193007; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_349099
| Blastp | Protein MSP1 from Saccharomyces with 47.47% of identity |
|---|---|
| Blastx | Protein SAP1 from Saccharomyces with 41.06% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (YGR028W) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019415674.1) |
| Pfam | FHA domain (PF00498.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |