Ll_transcript_349079

• Id Trinity: TRINITY_DN52471_c1_g1_i2
• Name Transcript: Ll_transcript_349079
• Sequence: ATAGTAATTCATAAACCCATAACTATCATTTCTCTTCTGTCATTGAAGCAAAAGAAGCAGAAGAAACACACAGCAATGGTTTCAACGGGAAGCAACACTG AATCTCTCTCCTCCAACAACACAAAACAACATTCTTCCTCTTCCGACGACAAACCTCCATCTCCGCTACCTTCCTCAGAACGACAAAAGGTTGATAATGA CGGCGCCGAGTCCGAGAAGCCGGTGCCGGCGGCGGAGAATTCAAAGGACTTGATAACTGTTGAGCCTCCGGCACGTTCCGGCGATACTCAGATCACTTCA GCTGGCGGTGCTGGTGGCAAAGATGACGGTGTGCCTGCCGTGGATGTGACGGCACCGATTGCTGAGGCCAAAGAAGAAGAAGAAACACACACAGCAATGG TTTCAACGAGAAGCAACACTGAATCTCTCTCCCCCAACAACACTAAACGGCCTTCTTCATCTTCCGACGACAAACCTCCTTCTCCTTCTCCTTCGCCAAA ACGACAAAAGGTTGATAATGATGGTGCTGAGTCCGAGAAACCGGTGCCGGCGGCGGAGAATTCCGAGGATTTGAGAACTCTTGAGCCTCCGGCTGATGCC GGCGATACTCAGATCGCTTCAGCTGGCGGTGCTGATGGTGAAGGTGACGTTGTGCCTGCCGTGGATGTGAAGGCACCGCTTGCTGAGGGGCCTTTGCCAA TAATTTTGGTGGCTGAAAAGCCAAGACCTTCTTTCTCTTCATGGAGCATGTATCAGAAGCAGAATCCAAAAACTGATTGTTCAGTTCCCTGGTGCAGGCT TTTAACTCAGTCTTCACAGGATCCAAATGTTGTCATTTGCATGCCGAACTTCATGATTGGTTCGAGTAGAAATTGCAACTTTCTGTTGAAGGATCAGACT ACAAGTGGAATTTTATGCAAGATCAAACATACTGAGTGTGAGGGAAATGCTGTAGCTGTGCTACAAAGTATGGGTAGCAAAGGATCAGTGCTAGTAAATG GGATGCTTGTCAAGAAGAACACTAGCTGTGTGCTTAACTCGGGTGACGAGGTGGTTTTTGGGTTGTTTCTTGGGAATCATTCTTATATTTTTCAGCAACT AAATACTGAAATTGCTGTTAAGGGTGCAGAAGTTCAAAATTGTGCTGGGAAATTTGTGCAGATTGATAGGAGAAATCGAGACCCTTCAGCTTTGGGAGCT GAGCTTAATGGTCTCGAAGGCAACTCAGCTCCAAATGTAGGGGCTGATAAGGCTTCTGATGTTGGAGCAAGCGACAAAAACTCTCCTTTGGATTGTGATC CAGATGATACAGGCACAGAAGCAGGCAATGTATTGGAAGAAAGAAATGGGACGAGGGATACACTAGGTGCATCGACTTCGGGTACGTCTGTGCGCTGTGC AGTTTTTAAGGCAAATGTTGAAGCGGCAATTCTGGATGGAAAAGAAACGGATGTGTCTTTCGACAACTTCCCATACTATTTAAGTGAGGATACAAAAAAG GTCTTGGTGGCAGCATGCTTTATACACCTAAAGCATAAAGAACATGCAAAGTATACCACAGATCTTACAACCATAAACCCTCGTATTCTACTCTCGGGAC CTGCAGGATCAGAAATATACCAAGAGATGTTGGCAAAAGCACTAGCAAATTACTTTGGTGCTAAATTGCTCATATTTGATAGCCATTTGCTTTTGGGTGT AAGATAAAGATTCATTGTTTGATCTGATACATTGGGATCAATCTTGCATGTCTTTTTTGTCAATTCATCGTCGAATTATTCTTTTTACTGAAAGCTACGA TAGTGAATCTTCATTTGTTGTTTATCACTAGGGTTTATCTTCAAAGGAAGCTGAGCTGCTCAAAGATGGATCCCATGCTGATAAATCCTGCAGCTCCGCC AAGCAAAGTCCTACAGCCACAGACATGGCTAGGAGCATGGATCCATCAACTAGCGACACTGATACACCTAGCTCTTCAAATACACCTACTCCACATGGTC TCGAGTCCCAACCTAAGCTAGAAATTGATAGTGTAGCATCTACCTCTGGGACAGCTAAAAATTGTTTGTTTAAACTAGGTGATAAGGTAAAATATAGCTG CTCATCTTCTGGTACATTATATCAGACATCTTCTTCAAGGGGTCCAACTAATGGAAGTCGTGGAAAGGTTGTCTTGGTTTTTGAGGAAAATCCCTTGTCA AAAGTTGGTGTAAGATTTGATAAACCTGTACCTGATGGAGTTGATCTTGGAGGTGCCTGTGAGGGAGGTCAAGGATTTTTCTGCAATGTCAATGATCTTC GTTTGGAAAACAGTGGTGTGGAGGAACTGGACAAATTGCTTATCAATTCGTTGTTTGAGGTTGTTTACAGTGAGAGCAGAAATGCCCCATTTATTTTATT CATGAAGGATGCTGAGAAGTCTGTAGTAGGAAACGGAGATCCATTTTCATTTAAAAGTAGGCTTGAAAACCTTCCCGACAATGTGGTGGTAATAGGTTCA CACACTCACACCGACAGTAGAAAGGAAAAGTCACATCCCGGGGGTTTGCTTTTTACGAAATTCGGTAGCAATCAGACTGCCCTTCTTGACTTGGCTTTTC CGGATGGTTTTGGACGATTGCATGACAGAGGAAAGGAAGTCCCAAAGCCAAACAAAATGTTGATTAAGCTGTTCCCTAATAAAGTTACAATTCACATGCC ACAGGATGAGGCACTTCTAGCATCTTGGAAGCAGCAACTGGATCGAGATGTCGAGACTCTTAAAATCAAAGGAAATTTACATCACTTGCGCACAGTTTTA GGCCGTTGCGGAATGGAATGCGAAGGACTTGAGACCTTGTGCATTAAGGATCAGACACTTACAAATGAAAATGCAGAGAAGATAGTCGGTTGGGCTTTAA GCCACCACCTCATGCAGAATTCTACAGCTAATCCTGATTCAAAGCTTGTATTGTCTTGTGATAGCATCCAGTATGGAATTGAGATCTTGCATTCTATACA GAATGAGCCCAAGAGCCTGAAGAAGTCTCTTAAGGATATTGTAACAGAAAACGAGTTTGAAAAGAAGCTTTTGGCTGATGTTGTTCCACCCAGTGACATT GGTGTTTCTTTTGATGATATTGGAGCTCTAGAAAATGTGAAGGATACACTTAAGGAGTTGGTGATGCTTCCTTTACAGAGGCCACAGCTGTTTTGCAAGG GACAGTTAACCAAGCCGTGCAAGGGTATCCTATTATTTGGTCCCCCTGGAACAGGTAAAACAATGCTTGCAAAGGCAGTTGCTACTGAAGCTGGTGCGAA CTTCATCAACATTTCTATGTCAAGTATTACATCTAAGGTTCAATTTGTGCCTCTGGATGTATTTAATCTTACCAATATCAGTTTGTTGCGCATGTTAACT CATGTTCTTGCCCCCTTTTGCTTTAGTGGTTTGGTGAGGGCGAAAAATATGTGAAAGCTGTTTTCTCTCTGGCTAGTAAAATTGCTCCTAGTGTTATATT TGTGGATGAAGTTGACAGTATGTTGGGCCAGAGGGAAAATTCAGGGGAGCATGAGGCCATGCGGAAGATGAAAAATGAATTCATGGTGAATTGGGATGGG TTACG
• Tissue: pods
• Gene name: LI_gene_193007;
• Additional information: details;

Expression of Ll_transcript_349079

FPKM

• PAB: 0.2
• PNAB: 0.7
• PS1: 1
• PS2: 0.2
• PS3: 0.1
• PW1: 0.8
• PW2: 1.1
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_349079

• Blastp: -
• Blastx: Protein SAP1 from Saccharomyces with 41.06% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417132.1)
• Pfam: FHA domain (PF00498.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;