Id Trinity | TRINITY_DN52500_c0_g2_i21 |
---|---|
Name Transcript | Ll_transcript_507675 |
Sequence | CAAAAATCAACTTTGAATACAACAACTTCTTATTCTTCTTATTCTTCTTCTTCTTCTGTTCACACTCTTTCTTCTTCTTTTCATTTCAATTCTTTCATTT TCTTTCGTCTTCATCAAAACCTAAACCAATGTTGCAGTTATGCTAGTTCTTCATCACCAACCATGGTTTTCAAAGGCAGATTCTTCTCTTCCAAAAAATC CGATTCTTCAAATTCAAGCCCCGACGCTTCTTCCACCAACAACACTCCTAAATCATTCACTTCCAATTCTCCTTCCAGATCTCAACTCAACAATTCGAAA TTCCCTTCCAATAAGCCCTTAGCAGGTGCCTTCGCCGCCGCCGGCGGAGCGTCGCGGAGGACGCTGGTGAACGACGGGATAAGGAATAAGGATGTGATCA AAGGAAAGAAAATTCAAAATCAAGTGCCGGAGTCTCGTCCGATTACGTTAACCTCGGCGGTGGCGGGAGGTAAGGAGGTGTCGCCGTCGTTATCGGCTTC GCCGATTATGGCGTCGTCGTTAGGGTTGAATAAGATAAAGACGAGATCAGCGCCGTTGCCGCAGGAGTGTTTTTTCGAGTTTAGCGACGATAACAAGCTC GTTGCGAATAATCTCACTAGGAATAGTAGCAGTGTTGGTGTGAAGAAGAAGGAGAACAGAGTATGGTTTCAGGAGATTGGAGCTTCGGTTGATAATGGTG ATAGAATGTCCATTGGTAGTGCACTTTCCAGGGAACGGAGTCCGGCTGCGTCCGTACAGTCGCCGCCACAGAACGGGGAATCCGATTCCGAAGCAGGGAG GCAGACATCATCAATGGCTCAGACTGGAGGCTTAGGAAGTGCAGATGTTAGCACTCCAGAGACAGCATATGATTATGAAAACCCGAAGGAGACTGAATCT CCTCGTTTTCAAGCTATCTTACGTGTCACAAGTGCACCCAGAAAGAGGTTTCCTGTTGACATCAAGAGTTTTTCCCATGAGTTGAATTCAAAAGGTGTCC GGCCTTTTCCTTTTTGGAAGCGTCGGGGGCGAAATAACCTCCAGGAGATCTTGGTTGTTATTAAGGTAAAATTTGATAAAGCAAAGGACGAGGTGAACAC TGATCTGGCTGTTTTTGCAGCAGACCTGGTTGGAATTCTTGAAAAAAATGCAGATACTCATCCTGAGTGGCAAGAGACAATTGAAGACTTGTTAATTTTG GCTAGGAGGTGTGCTATGACCTCATCTGGGGACTTTTGGCTTCAGTGTGAAGGCATAGTTCAGGAGTTGGATGATAGGCGTCAAGAGCATCCTCCTGGGA TGCTAAAGCAGCTTCACACTCGAATGCTTTTCATTCTCACAAGGTGTACCAGATTATTGCAGTTCCACAAGGAAAGTGGTTTGGCTGAGGATGAACATGT TTTCAATCTTCACCAATCCAGAGTGTTGCATTCTGCTGAAAGAGGTATTCCTCCTGGTTTGGGAAGGGATGCTAAAAGTTCAAGTGCTGCAAGGGCCTTG AAAACTTCAATAAAAAAAGCATATAGTCAAGACCAGAGTAGTACCTTGGGATGGAAGAAAGATGCTGTGCAACGAAAAAAGCTATCACTTCCTGCTGCTG ATGAAACTTCGAAACACATGAAATCTCCTTCTGGAAGGAACCGAATGGCTTCTTGGAAAAAATTTCCATCGCCATCAGGAAAAAGCCCAAAAGAAGATGT ACATTTGAAGGACCAAAATAATGAGAGAGTTGAACCTTCAAAGACAGCAAATAATAGATGCATTTCTGATGTGGATCTCTCTGCTGCTAAGCCATCTAAG GTTCTTCCTATCAAAGATTTCCAGGGCCATGGTTCGAAGCACCAACGCAAAGTTTCCTGGGGCTACTGGGGTGATCAGCAGAAAAATAATGAAGAGAACT CAATAATTTGTCGTATATGCGAGGAGGAAGTACCTACTTCACATCTTGAAGACCATTCAAGGACTTGTGCAGTTGCTGATAGATGTGATCGGAAGGGTCT GAGTGTTAATGAGCGCCTTGTCAGAATTGCTGAAACACTAGAAAAGATTATGGAATCATGTACACAAAAGGATACTCAACAGATAGTGGGAAGTCCTGAT GTTGCAAAAGTGTCAAATTCAAGTATGACCGAAGAATCTGATATTCTTTCCCCCAAACTTAGTGATTGTTCTCACAGAGGCTCAGAAGATATGCTAGACT GTTTCCCTGAATCTGATAATTCTGTTTGCATGGATGGATTATCACTTATATCATGTAAAACTCGTCTTGGTCCAAAGTCTGACCAAGGTATGACGACATC ATCTGGAGGGAGCATGACTCCTAGGTCTCCTTTAATGACACCAAGGACAAGTCAGATTGACTTGCTATTGGCATGGAAGGGTGCTTATTCTGAGCATGAT GATCTGCCACAGATGAATGATCTTGCTGATATAGCACGATATGTAGCAAGCACACGTCTGGATGATGATCGATCGACATCATACTTATTAACATGTCTTG ATGACTTGCGGGCTGTTGTGGATCGAAGGAAGTTTAATGCACTAACCGTTGAGACCTTTGGAACACGAATTGAGAAGCTTATACGGGAGAAGTATTTGCA GCTTACTGAGATGGTGGATGTCGAAAAGGTAGATGTAGAGAGCACTGTAATTGATGATGATGTTCTCATGGAAGATGATGTGGTTCGTAGCTTGAGAACA ACCCCGGTGCATTCTTCGAGGGATCGTACTTCTATTGATGACTTCGAGATTATAAAGCCTATCAGTCGTGGGGCATTTGGACGAGTGTTCTTGGCTAAAA AGAGAACAACAGGTGATCTTTTTGCAATAAAGGTTCTGAGGAAGGCAGATATGGTCCGTAAGAATGCTGTGGAAAGTATATTGGCAGAACGTGATATTTT AATTACAGTCCGCAATCCTTTTGTGGTTCGCTTCTTCTATTCTTTTACATGCCGTGAGAACTTGTATCTTGTCATGGAGTATCTTAATGGAGGTGACCTG TATTCATTATTAAGAAATTTAGGTTGCCTAGATGAGGAAATTGCCCGTGTATATATCGCTGAAGTGGTCCTCGCATTAGAATATTTGCATTCACTGCGTG TGGTTCATCGTGACTTGAAGCCGGACAATTTGTTGATTGCACATGATGGCCACATTAAGCTAACAGACTTTGGGCTTTCAAAAGTTGGTCTCATCAACAG CACAGATGATTTGTCTGGTCCAGCAGTGAGTGGGACATCCCTACTTGGTGAGGACGAGCCTCACTTAGCTACATCTGAGCTTAAAAGGGAGCTGAGGAAG AAACGTTCTGCTGTGGGAACACCTGATTACTTGGCACCAGAGATACTCTTGGGAACTGGACATGGGTATACTGCAGATTGGTGGTCTGTTGGTGTCATTT TATTTGAATTGCTTGTTGGCATTCCACCCTTCAACGCAGAGCATCCTCAGAGTATATTTGATAATATTCTTAATCGTAAGATTCCGTGGCCTGCGGTGCC AGAAGAAATGAGTCCTGAAGCACATGATCTTATTGACCGATTATTGACTGAAGATCCTAATCAAAGACTTGGAGCCAGAGGGGCATCAGAGGTGAAGGAA CATGTTTTCTTCAAAGATATAAACTGGGACACACTTGCCAGGCAGAAGGCTGCATTTGTTCCTGCTTCTGAAAGTGCTCTAGATACCAGTTATTTCACTA GTCGCTACTCGTGGAATACTTCTGATGGCCTTGCCTATCCTGCAAGTGACATTGATGATTCCAGTGATGCGGATAGCTTGAGTGGCAGCAGTAGTTGCTT GAGCAATCGCCAAGATGAAGTGGGAGATGAATGTGAGGGTCTTGCCGACTTTGATATTGGCTCATCTATGAATTACTCTTTTAGTAATTTCTCCTTTAAG AATCTCTCCCAGCTTGCATCAATTAACTATGATCTTCTCACCAAGGGATTGAAAGACGATCCGTCTACACATTCTAGTCAATAGCTGTTATCATTTCTGT CACAAGTCCAGAAGTTAGTTTTTGACATATTTATATGAGCAATTTTGGGAGGCCATAGTTGTTTCTATACCTTGTACATATTTTGCAGAGAATTAGAGGC TGAATCTGGTGACGGGTGTGCTCTTTGCTCACGGGGTTACACCGTTCCCGGAAAACACTGGGTTTTCAATTTCCGGTTTATGTTGTGTATGAATTGAGGA CTGTAAATTACTGCTTCTGTATTGCTTCTGTACTGCTTCTGTATTGCTTCATCAAATCGTATAATAGCAATGAAACACATCACTGTAATATTTGAGATGT AACTTAGAGCATATAGACTTATTTACCCTGATGATCACTCAAGACTCAACAATAGATAATATGAAGTGATTAACCTGCTAACTGGTTTCTATTAGTTTTA TGAACTTCGTTGCTTGTTTTATGAACTTCGTTGCTTGTATGAGTTTTATATATTATTA BLAST |
Tissue | pods |
Gene name | LI_gene_193251; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_507675
Blastp | Probable serine/threonine protein kinase IREH1 from Arabidopsis with 66.84% of identity |
---|---|
Blastx | Probable serine/threonine protein kinase IREH1 from Arabidopsis with 66.89% of identity |
Eggnog | microtubule associated serine threonine kinase(ENOG410XPWX) |
Kegg | Link to kegg annotations (AT3G17850) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019458158.1) |
Pfam | Protein kinase domain (PF00069.24) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |