Ll_transcript_507471

Id TrinityTRINITY_DN52544_c2_g2_i10
Name TranscriptLl_transcript_507471
SequenceCTTTGGACAATGGATTCAAAGTTCTTGCTAATGCTGTTGGTCTTAGATCCTTAAGAACAGTTGAAACTCCAGCATTTGAAGCATTGAGGTCACCAATTGA ATCTGCTGCAGTGAAGGTATCTGGCTCTTCTGTTAATATTAGTCCTGTCAACTGTAAAGTGGAAAGGAGCTCCCCTGCTAGGCCTTCTCCAATTCTCAAT GGGGTTGAACCCATGGGTCGAAATGCGGAGAAACCAAGAAATGTGGAAGATGTAATAGATAGACCTAAACCATGGCAGCTGTCTGAAATTGTGGATCCTG TCCAATGTCGGTTAGCTACCATGCCTGACAACACGGACTCTTCTAGCAAGGTTGTTCGACTTCTATATACGAATTCCGGTGCTGGTCTTTTGGCACTTGG CTCAAATGGTGTTCAGAAGCTATGGAAGTGGTCTCGCAATGAACAGAATCCCACCGGAAAGGCCACTGCCAGTGTTGTTCCACAACATTGGCAACCCAAC AATGGTCTTCTTATGACAAATGATATCTCAGGTGTGAACCTTGAAGAAGCAGTTCCTTGTATTGCACTCTCAAAGAATGACTCATATGTTATGTCTGCCT GTGGTGGAAAGGTTTCACTATTTAACATGATGACATTCAAGGTAATGACAACATTCATGCCACCGCCTCCTGCGTCTACCTTCTTAGCTTTCCATCCCAA GGATAACAACATTATAGCCATTGGGATGGAGGATTCAACCATTCACATTTACAATGTCAGAGTGGATGAGGTCAAGTCAAAATTGAAGGGTCATCAGAAG CGTATTACTGGTTTAGCCTTTTCAACCCATCTTAACATCCTGGTTTCATCTGGCGCTGATGCTCAAATTTGTGTGTGGAGCATTGATACATGGGAGAAAA GAAAAGCGATTCCAATACAATTACCAGCAGGCAAGTCACCTGTTGGGGATACACGAGTCCAGTTCCATTCAGATCAACTCCGCTTATTGGTAGCCCATGA GACTCAGTTGGCAATATATGATGCCTCTAAGATGGATCGCATTCGGCAGTGGGTTCCACAAGATGCTCTGTCTGCTCCCATATCATACTCAACATACTCT TGCAACAGCCAGTTAGTATATGCTACATTTTGTGATGCCAACGTTGGGGTTTTCGATGCAGATACCTTAAGACTAAGATGTCGTATTGCACCATCAATAT GCTTGTCACCGGCAGCTTTAAGTGGAAGCCAAGCTGTATATCCTCTTGTTGTTGCAGCTCATCCGCTAGAGCCAAACCAGTTTGCTGTTGGGTTAACAGA TGGGTCTGTCAGAGTGATAGAACCCACTGAATCAGAGGGTAAGTGGGGTTCTTCTCCTCCTATTGACAATGGAATATTGAATAGGACAACATCATCATCT ACAACAAGCAACCACACGGCCGATCAGTCCCAACGATAGGATTCATTGTACTATACTAGCATAGTTCAGTCCATGGGTAATTTTATCAGCCTAGATGTTT AGATTTTGATACCTCAATTTGTCTAATCAATGTCAAGTAAGCTTGGCAATAAAATGGTAAATTTTTAGATGTATGTGCCCTTGTATACCTTAATTTATTC TACTCCAACACAATTTGATTGTTTATATGTCATTGAAATGTTGTTTCTTGTAACAATGTGAATCTGTTAATTCTCCTTGCATTGTTGTAGAAGACTTGTA GATGAAATCTATTTGATTATTATTGGATAGTAACTAGGAAATGTCAGATAGAATTCCA BLAST
Tissuepods
Gene nameLI_gene_193600; 
Additional informationdetails; 

Expression of Ll_transcript_507471

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_507471

BlastpProtein TPR1 from Oryza sativa with 70.1% of identity
BlastxProtein TPR1 from Oryza sativa with 70.1% of identity
EggnogPositively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein- mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for(ENOG410XP3K)
KeggLink to kegg annotations (4327709)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019452264.1)
PfamWD domain, G-beta repeat (PF00400.31)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;