| Id Trinity | TRINITY_DN52552_c0_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_506871 |
| Sequence | TTTTGAATTAAACGAAGGAATGAGAAGGAACATTCCGCGCTCTGACTTAACAAAAAAACATTGATTCATTGATTGATTCATTGATTGATTCACCGATTCC ATAACCTTAGATCCATTTTCTGAAATCGTTGAGAATGTTGATGAGTCCAAGATTAAGAGGATCAACATTAACAGCATCATCAGCGTTATTATCATCATCA TGGGATTCAATGCTCCCTGGTCCACCAACCCGAAACAATTTCGGTTCTTCAGATCTCAATTCTCAAGGCCTTCTCGTTTTCTCTTCTGGAAGTTCCTTAT CAATTATCGATACTCATTCTATGCAACTTCTCTCTTCTTTCTCTATCCCTTCTCCTTCTTCTTCTCTATCTCCTTTTGTAACCGCTCTTCGCTGGACCCC ACTCTCTCTCAACCGTCAATTTCTCTCTACTGAACCTTCTTCTTCTCATCTCGTCATCGCCGCCGGTGACCGTCAAGGTCGAATCGTTCTTCTTGACTTT CGTCTCAAATCTCCGATCCTATGGTTCGATACTGATTCCAATTTCGGTGTTCAAGATCTTTGTTGGGTTCAGGCTCGACCTGATTTATACCTAATTGCTG CGATTCATGGTTCCTCTACGCTTTCTCTTTACAATGCTTCTACTGGTCGCTGTGTTTGGAAATACGATGCTTCTCCTGAATTCTTCTCTTGCGTTCGTCG CGATCCGTTTGATTCGCGACGCGTGTGTGTAATTGGACTCAAAGGTTTTCTCCTTTCTGTTGTTGTTGTTGGTGAGGAGAGCATTGTGATTAAGGATCTT CAGATTCGGACTGATAGCAGCGAGTTTATTAAGGTCGAGAGAGATGTTGCTGCCGCTGGTTCTGCTGCATTGCCTGCTTCGGCCGCGTTTCCGCTTTATA CAGCGAGGTTTGCTTTTTCGCAGCAGTGGAGGCACATTTTGTTCGTCACGTTTCCGAGGGAATTGATTGTGTTTGATTTGCAGTACGAGAAAGTGATATT TGCGAGTACATTGCCTCGTGGTTGCAGCAAGTTTCTTGATGTGTTGCCTGATCCCAATAATGAGTGGATTTACTGTGCTCATATTGATGGAAAGCTCAGC ACCTGGAGGAGGAAACCTGGCGAACAAGTACACATTATGTGCTCAATGGAAGAGTTAATGCCTTCAATTGGAACCTCTGTCCCTTCTCCTTCAATACTTT CCTTCCTTTTATGCCAATCCGATTCCACAATCCAGAACATTGACAAGAGTTATTCTGATGTTCCTAGCTCTCCCTACCTTCGCGAGGATTTTGATAATCC TTTTGATTTTTGTGATGAATCCATAATTGTTTCTAAGATACATTTGATCTCCATTTCCGATGATGGAAAAATATGGAACTGGCTCTTGACTACTGAAGGG AATGCAGTACACACTCAAAAGGATGATAAAAAGTTGGGGTTGGTCAATGATGATGGTAAAGTATCATTTCCTGAGGTCAACTCTAACACCGCAATATCTT CTGTTGGTGGACGTGATCCAGAAGTACATAGGCACCAGGAGAGGCTCAAAGATAATAAAAGCTGCATGCCAAGCTCAGTCTTCAATCAGGAAGAAATATT AATAAAAGTAAGTTTAAATTTACAAACCTGCTTTGCTTTGTAAGCTACATTTATGTCTCAGATGGTGAACTCAGAGGACACATATATAGAGATTGCAAAC TTCAACTTTTTAGCATAAATATGGAAAATTCAAGCAATGCAATGGTTTCTAAACATACTTTTGCATTATTCTATGCCCTTGCAAAGAAACAGATTGAGTG CCATTTTAGAATCTAATTCTTCATTATGTTTATTAACAACTTGGTTTTATTTACTGCTTCTAGTCCATGGTATTAATAATGTACTTGGCTAATTTTTTCT TGCTTCTGGTTCATATATCCAACCACTTGGGAAATGTGTGTATGCATGTATAAAACTTGTGTGTACTCACACATGCACGGATTATGGTGCATACAGTCTG CATTGCTGTTTATTATGTCCCTATTTATATATTTGTATGAACTATAGCCCAAGTAACCGTTCCTTCCCAATCTTCTCTGCCTTCCAAGAAAATAAAAAAG CTCAAGAACGATGAAAAGGTTGTGTAATATTTGTCAAATTGTAACTAAGCTCCTTTCGTCATCTGCTCTTCACTGAAGTGAACATTGGTTGGGTCCAATG GATTATTTTTTCCTGGAGGCAGATGGTACAATCACACATTCCAAATTTGGGATTAGCTTAGTTGGACAGCTTCAGCTTCTCTCTTCAACAGTGACTGTGT TGGCAGTACCAACCCCTTCTCTAACAGCTACTCTGGCCCGTGGGGGAAATTGTCCTGCAGCAGCTGTTCCCCTGGTTGCTTTGGGAACACAGGGTGGGAC AATAGAGGTTGTTGATGTTTCTGCCAATGCTGTTACATCAAGTTTATCTGTACATAATGGCACTGTTAGGGGACTTCGATGGCTAGGAAATTCCAGGCTA GTTTCATTTTCTTACACTCAGACTAATGAAAAATCTGGAGGATATATTAACAAGCTAGTTGTGACCTGCCTCCGAAGTGGCCTTAACAAGGTTTTTCGAG TTTTGCAAAAGCCAGAACGTGCACCTATAAGAGCTTTGAGAACATCTTCGTCTGGAAGGTATCTTATAATTTTGTTTCGTGATGCACCTGTGGAGGTTTG GGCAATGACTAAAAATCCTATCATGCTTAGATCGTTAGCTCTTCCATTTATTGCATTGGAATGGACTCTTCCAACAGTTCCACGTCCTGCTCAAAATGCA GCTTCTAGAGATTCATCTCTGTCATCTAAGGAGCAAATATCTGGTGCATCAGATGAAGCATCTACATCATCAAAGATTTCCTCATCCAATTCAAAGGGTT CAAGCACAGAAGGATCTCAGGAAGACACTTCTGAAAGTTTTGCATTTGCTCTGGTGAATGGAGCACTTGGAGTTTTTGAAGTACAAGGTCGAAGAATTCG AGACTTCAGACCTAAATGGCCTTCCACTTCCTTTGTATCATCAGATGGTTTGATTACTGCACTCGCCTACCGCTTGCCTCATGTGGTCATGGGAGACAGA ATAGGGAACATAAGATGGTGGGATGTGACAACTGGACAATCTTCCTCATTCAACACTCACAGAGAAGGAATTCGGCGAATCAAATTCTCACCTTTTGTAC CAGGGGACCATAGTCGAGGGCGTATTGCTGTTCTGTTTTATGATAATACCTTCTCTGTATTTGATTTGGACTCACCAGACCCCTTGGCCCATTCACTTTT GCAACCTCAATTTCCTGGAACCCTTGTGTTGGAACTTGATTGGTTGCCCTTGCGAACAGACGAGACTGACCCGCTCGTTCTGTGCATTGCTGGAGCAGAT AGTAGCTTTCGCCTTGTTCAACTTACCGCAAATGATAAACGATCTGGTCATGTACCCCGTATCAGAAAGATAAAGGAGAGATTTCGGTCAATGCCTATAT GTTGTCCCATAATACTTCCTACACCACATGCTTTGGCAGTGCGCATGATCTTGCAATTGGGTGTCAAACCTTCTTGGTTTAATACCTGTAGCACTACCAT AAAAAAGAGGCCTCACTTAATTCCAGGAACTCCATCATCTGTGGGGGATTTTCGAACTTACATGATCAATATACCACCTCTTGGTGACTCTGTGGTGCCA GAGATGCTTTTAAAAGTATTGGAACCATATCGAAAAGAAGGTTGCATACTCGATGATGAGAGAGCCAAGTTGTATGCCAGGATTGTGGATAAAGGTTGCG CTGCAAGGTTTGCCTTTGCAGCTACAATATTTGGTGAATCGTCAGAAGCTCTGTTTTGGCTACAGCTGCCCCGTGCTTTTAAATATATGATGAATAAGCT ATTGAGAAAGCCTCCACTGACGGTGCCCTCAGAGGAATATGTGTCTGAGGTTGATGAGACATCTTTATTGTCTAGGATATCATCAAAGGGGAAACCAACA GAAGAAATGGGGGGAGGTGTATTGAGTCAAGGTCAGCTAAGGGTGATGACTTTTGATCGAGAAGAGTTGTGCAAAAGTGCCAGTGAGCGAATTTCTTGGC ATGAAAAGCTAGAAGATGAAGAATCAATACAGAAACGTGTACACGGGCTCGTATCAGTTGGAAACCTAGAAGTCGCAGTCAGTTTATTGCTTTCTACTCC TCCAGAAAGCTCTTACTTCTATGTGAATGCTCTTCGTGCAGTTGCTCTTTCTTCTGCTGTTTCAAGGTCTCTTCATGAACTTGCAGTCAAGGTTGTTGCA GCCAACATGGTGAGGGCTGATAGGTCACTCTCTGGTACTCATCTTCTCTGTGCAGTTGGAAGATATCAAGAAGCGTGTTCTCAGCTACAAGATGCCGGGT GCTGGACGGATGCTGCGACCTTAGCTGCTAGTCACTTGCAAGGATCAGATTATGCAAGGTTCTTATTCTTTCCTTGAACAGATGCTTCTGTCCACATAAA TTAACGTCACTGTAAGACAACTTTGTTTTGTTATTTTAGTTTACACGAACAGGGTAAACACATTCATTCACATCTGCTAGTTGCAGCATGACCTCCAAAA CTTTGGCTATATGACACAAAATACCTCACTAGTATTTGTGACTTATATCAAACTTATTATCCCTGACCTTATTGTTAATATAGGGGAGAAACTTAGTTTT TGCTTTTGGTTATTGACATCATGCCAGTGGCAGATTTGTAGAATCATTTGTAATTTTACGTAGTTTTACATTTTTTACTCTCTGACATGATTGCTGTCTC AACCTCTGCATTCGGATGACTGTCAAAAAGAACATTTGAATTGTATGCCATCATGATCATGACTAGAAGAGTTTTTCTCTATTTTGTATTCTTGCAGAGT GTTGCAAAGGTGGGCTGGATATGTCTTGCACACTGAACATAATATCTGGAGGGCTTTGATTTTGTATGTTGCTGCTGGTGCACTACAAGAGGCATTAACA GCTCTTCGCAAGGCTCAACTACCTGACACAGCTGCAATGTTTATCCTTGCATGCCGTGAAATCCATGCAGAAATAGTTTCAAACTTGGGTATTGTTGACG ATGATTCAAGTTCATCTGTTACAGAGAAGCTACTAAATTTGCGAGATTTAGATCCAGAGAATGAAGATGTCATTGCAGTTGATGAGTATTTCGGGGAATA CCAAAGAAAATTGGTGCATCTATGCATGGATTCGCAGCCATTCTCTGACTAGTTGCAGGGCTTGATGAAATGGATTCAAAGTTCACATTTATATTCATAA AGCAGTGGATTAACAACTCTGGGCTTGAAAAGAAAGTTGTAGGGTGATTGCTTTGCCAGTACCGCTAAAAGGAGCAGATACTTTCATTACCCAAGTTGTT GCCAAATGTGTACAATAATGGAAGCCATTGGGAAGGGAATAATGACCCAAACCGTCTTGGACAAATAGAGGTGGCAAAATACTGAAGTCTTCTATGTGAC ACAATCCACTGAACTGCAGTTAATATGGTTTACATTAACTTTCTGAAGTTAAAAAGATTGCATCAGATATGGTAATCACTATTGTAGCTTGTGTATAATT TTTTATTGACAACTAATCATTGAATTGTATTTATATGTGGGTATTTGATAGGAACTTAAATGACTGCATCTATATACATGTAACGCCCAACCTTCAAATA TATACACGTGAAATGTGTGAGCACTTTATTTTTTAGACGTGCCAATTAATAATTCTC BLAST |
| Tissue | pods |
| Gene name | LI_gene_193646; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_506871
| Blastp | WD repeat-containing protein 11 from Homo with 24.27% of identity |
|---|---|
| Blastx | WD repeat-containing protein 11 from Homo with 24.27% of identity |
| Eggnog | WD repeat domain 11(ENOG410XT4R) |
| Kegg | Link to kegg annotations (55717) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019452543.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |