| Id Trinity | TRINITY_DN52559_c1_g6_i3 |
|---|---|
| Name Transcript | Ll_transcript_506941 |
| Sequence | CTTTGTAGTTACACAGAGAGAGAAAGAGAGAGAAAAAGAGTTATGGCTATGGCAACAATGAGAAAGATTATTCCAAAGAGCCCAGAAGCGAAGCTTGGTA TGAGAGTGAGTGATTTGTGGGATGTTCAGGAACCACAGCTAAGTCCTACTGAAAAGCTTAATGCTTGTTTTGAAAGCATACCTGTTTCTGCGTTTCCTTT AGCTCCTTCAAACCAAGAAATTGAGATAAAATCAGACGCCACACTAGCTGAGGCTGTTAAAATACTGGCACATCACAACGTTCTCAGCGCACCTGTGGTG AATGTTGATGCACCTGAAGATGCTAGTTGGATTGACCGATATATCGGGATAGTCGAGTTTGCTGGAATTGTTGTATGGATTCTGCATCAGTCTGAACCTT CAACTCCTAAGAGTCCATCAACTCCAACAAGTGCAAGTGCTATTGCAGCTGCAGCTAATGGAATAGCCTTTGCTCTAGAGTTAGAAGCCTTAGGTCTTGG ATCTGCTGCAACAACTTCAGGGGACTTCTTCGAGGATCTCACTTCTTCTGAGCTTTATAAGAATACCAAGGTTCGCGATATTTCAGGGACGTTCCGCTGG GCGCCATTCCTTGCTTTAGAGAGATCAAACTCATTTCTAACCATGCTCTTGCTGCTTTCTAAGTACAAGATGAAGGGTGTTCCGGTGGTAGATTTAGGTG CCGGTAGAATTGATAACATCATTACACAGTCTGCTGTAATTCATATGTTGGCTGAATGTGCTGGCCTTCAGTGGTTTGAAAGTTGGGGAACCAAGGAACT ATCTGAACTTGGTCTTCCCCTGGTGCCACCAAATCATATCATCAAGGTTTGTGAGGATGAACCAGTTCTTCAAGCATTTAAACTGATGAGGAAAAAGAAA GTTGGAGGGGTGCCTGTAATCGAGAGAGGCGGCAGCAAGCCAGTTGGTAATATAAGCTTGCGAGATGTTCAGTTCTTGCTAACTGCTCCAGAAATCTACC ATGATTATAGGTGTGTAATTATATCTACTTGTGTAGACTGTATTTTCTTTCTTTTGTTCTATCTGACACATTATCATTGAATGTTAACACTATAACAGAA CTATTACAGTGAAGGACTTTCTCTCAGCAGTTAGAAGCTACTTAGAGAAGAATCAGAAGGCCTTCCCAAAGTTAACTGAATATATAACATGCAAAAAAGA CTGCACTGTCAAAGAATTGATTCAATTATTTGACCATGAGAAGATTAACAGGGTTTATGTTGTGGATGATGATGGGAATCTGCAAGGACTGATCACACTA AGAGATGTCATCTCAAGGCTAGTACATGAGCCGCGAGGCTATTTTGGCGATTTCTTCGATGGCGTTCTCCCGCTGCCTGCAAACTGCAGGGTTTAACAGG CAAGACATCAAGGAAGAATAACTTATGATGTTGCAACAGTTTTTTTAGTAGAAATGATAAAAATAATGCAAATTGCTTTTTATGTGTTTTCTTCAGGGTT GAAGATGTTAGGCTTAGGTCTTTGTAACTTAGGCAGTTTGCAAGTTACTTGCACCAGTTTACCAGGTGTTACTTTGTGACTGGGTACTGTAATTATGGTA TAACTATAAGTTTTGTCAAGTTTTGAAAAAGATTGATTCCCTTAAAAAATGTTATTTTTAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_193703; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_506941
| Blastp | SNF1-related protein kinase regulatory subunit gamma-1 from Arabidopsis with 73.48% of identity |
|---|---|
| Blastx | SNF1-related protein kinase regulatory subunit gamma-1 from Arabidopsis with 73.16% of identity |
| Eggnog | snf1-related protein kinase regulatory subunit(ENOG4111F2I) |
| Kegg | Link to kegg annotations (AT3G48530) |
| CantataDB | Link to cantataDB annotations (CNT0002110) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463506.1) |
| Pfam | CBS domain (PF00571.27) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |