| Id Trinity | TRINITY_DN52579_c1_g2_i7 |
|---|---|
| Name Transcript | Ll_transcript_504995 |
| Sequence | TAAAAGTCAATACAGTTATTATCAGAACATGACCATGATTCCTTGTTCTCTAAAGAGTCTTGAAGGACACAAATAATTTGAAAGATCGTACGAAAGAAAC TTACTGTATCAATAATCACTACCACCAACATTGCGAGGGGACTCCCTTCTGGATTAATGCAAATGCTACAGAAGTAATTGCTATTTAGATTTTCAATTAT TTACCTTGCTACAAAAAGTTTGGCATTATACAGATTCAAGTGATTCATACATTACATCCTGCAGGTGGAATAGATCTTGTTCTATGGAGTCGCAAATCAA ACTGCTACTTTTAGTTTTTGGTCCAGAAGCAGAAATCTCCTTCCCTAATGCCTTTAAAGCTTCTGGATAGAATGGTGTGACTAGTTTCTCTTAGGCCATT GTGATGAATGCACTGCTTGTTTATTCTCAGCAGAGCAAAGAAACATGTAACTACTAGTTATAACTTTGTTTAAGCACGAGATCCTATGAAAAGGGCAAGA TGATTTTCCATCTCAAACATCACAAACTAACTACAATACCTGTAAGCAACTCATACCAACTTTTAAGATGTTATTTCTTTCTTCAATCTAATCTTGATGC TGGTTATTATTTGTACCATACCTACTAGTGTCTTATAATTTTAAAAATCATAGTTTGTATTTTATGTTGGTTTTGTGTGTCTAATGCTCTTGCACACATG ATTCCTAAGTAAGGACAGTTTCGGTGACTTTAGCAATTGGTAACCATGTCAGTCACACAGAAGATAAACAAACTCCAGAATGATGCCACTAGAATTCAAC TATGGCTAAGATGGGTACCTACTATTTCCTGCTGAAATTAAAGCAAATAAGTATGCAAGGTAACATAAATGACAAACTAGTACAAGAAAAGGACAGAAAC AGAACAATAACAAATGGATGCAGAGCTCCACCGTTTTGAAACTACCCAACTCCATCAAAACTTGTGAGGAAAAACAAGGCCCATCGGAAAATCCTTCATT CACCATTAGGTGAAGCAATGGAAGTGTAAAGTATATAAAGTGTAAAGGTATATGAGTAGTGTTATTTGTAATGTTTAAGATTGACAAATTTTCTTGCAAT AAATGAATTTATATCTTTATCTCACCAACTATAAACACCTAAAAATTTAGAAGCTTTATGAGGCAATAGTTTAGAAGACTCAGAATCAAAGCCGTTATTC TCAAGTTTCTGATACTGAACATATTCTTCATTTTCATCTTGATACATAACCTCTTCCACATTCTCTCTTTTCTCCACACCATAACACTCCCTGGGCTTCT CCTCCGCCTGCCACACGTTCCGGTGCGTCGTGAAGATCTCCACCATTCTTGCATCCGCCTTCGATACATTGTCTCCCTCAGCTCCTCTTCCACAATGCAG AGCTTCATATTGAAGTTGTTTGGTAAGAGTGACAGGAAGACAGAGAAGGTAAAGTAAAGGAGTTTGGCCCAGAGTTAAATAAAAGCGTGCAGCAACAACA GCATAGCCCCTTCAACGAATGATCTCGCTATTAAATAATCGGGGTGCATCATCGATTAGCGCTCGCTAACTACTCTTTCCGATCAACATCACCGCCGACT CCAATCTTCCTCGCCGGAAACCCTATCTTTCACGGTTCTGCTTCTGATCACCACTCGCTCAGAGGGGAAAGCATAACTGCGTTCTTGTTTTGCTCCAAAT TCAATATCATCGGGAAAAAAGTGGCGATACCGGAGGTCTAGGGTTCCGGTAGAATTCTCTGAAGGTTTGACTGTCCGAGCTCTGATTGGTTCATAATTAC CTGATTGAGATAATTTGGAGGGAAATTTGCAAGGGTTCGTCGCCGACGGTGAGGGGAGGAAAACCTAATTTCTGTAATTTGGCCTTTCTTCTTCGGGGGA ATTTCGGAGTGAAACAGCGCCTGCGAAGTTAGAATTTGAGGGTTTTAATTGGGCACAGAAGGCGTAATAAGAAGATATTAATTGGAGTCCAGTGCTGTAG CTGTGCTTTGATGAGTTATTGATTCTTGCATTGAATTGTGATATCAGTTCTGCCACACAACATGGGGTACCATTCGGATAATTCACAAGACGGGAGGGAA GAAGATGATGAAGAAGAATATGAGGAGAATGGCAAGGGTAATCGTTTTCTTGGGTTCATGTTTGGAAATGTTGATAACTCTGGTGATCTTGATGTTGATT ACCTTGACGAGGATGCAAAGGAGCATCTATCTGCATTGGCTGACAAGCTGGGCCCATCACTGACAGATATAGATTTGTCAGGAAAATCACCTCAAACACC ACCCGATGTTGTTGAACAAGACTGTGGTGAAAAAGCCGAAGATGCGGTTGATTATGAAGATATTGATGAAGAGTATGATGGTCCAGAGACTGAAGCTGCC ACTGAAGAGGATTATTTATTGCCAAAAATGAATTTTTTCTCTACTGAAGCCTCTCTTCAAGTCTTGGAGTCCAGAGCTTCTGTTTTTGACGATGAAAATT ATGATGAGGAATCTGAAGAGGAACAAGACTTGGTGAATAATGATTCTAAAGTTGATGACATCTCTTTAACCGGGGAGCAGAAAGAGAGTTCTGTAGATGT GTCTAAAGGAGAGAGCGCTGAGGAACTTGGTCTACAAGTTGACTTACCACAGACTGAAGAATTGGACACCGAAATACAAAAAGTTGTGGAAGAGCCTGAA GTTCTGAAAAGGTCTACACCATTGCCCATTTTGTGTGTGGAAGATGGGGTGGCTATTTTACGCTTCTCTGAGATCTTCGGTATTCATGAACCTCTGAGAA AGGGAGAAAAGAGAGATCATCACCATTCTATTCCTAGAGATAGGTACAAGTCTTTCAATTTTTCTGATGATACTGTTGAAGAGGATGAAGAGGCATTCCT CAAGGGCTTCTCCCAGAATCTCTCACTTACTAGACAGGCTTGTGTAGTTCGTAATGATGTATCAGAAAGCAATGATGTTGACTTGGAATTTCCAAAATTT GGGTTTCTTCATGGGGATGCCTCAATGGATGTGAAAGATGATAGGCAACAGAAAGACTGTTGTCAAAGTGCTGAACCAATGAAAGTAGATTTAGCTGAAG GTCTTTCCCGAAAAGATGATTCCCTCATAGGGTCCAGCTTTTACCCTCTTGATCAGCAAGACTGGGAAGATGAAATCATTTGGGGCAATTCTCCAGCTGG TGATAATATTGTTCAAAGCTGTGAAATTTATGGATCAGATTTGGGAGATTCTGGTGGCAATGAAATAGAAATCGAAAGTGAGAAAAATCTTCAGTTGAAT CCCCTGAAGACAGGGGAGAAAGATGACAATGACTTCACATGTGGCCCTTCTGTCTCAGTGGAGCCCTTTGGTTCAAGGGATACTTCAGGATCTAAAACTG ATTTATTGTCAGAAAGCCTATTTCATCCCCAGCTTTTGAGGTTGGAATCCAGATCTCAAGAGGATAGCTCCTGTCCTGCCGATGGTAGAGGGGTGAATAT AACTGAAAAGCATAACCAAATTGGTCAAGTAAAGTGTTTTACCAAGGTTTTGTCTCAAAACAGAGAAATGATGGAGGGTTCCTGGCTAGACAAAATAATA TGGGAGGAGCTTGATAAACCTATTATAAAACCGAAGCTTATCTTTGATCTTCAGGATGATCAAATGCACTTTGAAGTTTTGGATAGCAAGGACACTAGAC ATCTTCGCCTTCATGCTGGGGCTATTATTTTAACCCGTTCCCTAAAATCGAACAGTGGGGACTCTTCTGAGCTACCTGGACATGGAGGTCAGCATGGATG GCGAAGTGTTGCTAATGACAAACACTACTCAAACAGGAAAACTTCTCAGCAACTGAAATCAAATTCTAAAAAACGCTCGGCTCATGGGGTCAAAGTTTTT CACTCACAACCTGCACTGAAGCTGCAGACGATGAAGTTGAAGTTGAGCAATAAAGATATTGCAAATTTTCACCGGCCGAAAGCATTATGGTATCCCCATG ACAATGAGATGGCTGTCAAAGAACAAGGGAAGTTGGCAACACAAGGACCCATGAAGATTATTATGAAGAGCTTGGGCGGCAAAGGGTGTAAACTGCATGT TGATGCCGAAGAAACTCTCTCATCTGTTATAGTAAAAGCTTCTAAAAAGCTAGATTTCAAGGCATCCGAGACAGTGAAAATATTTTACTCAGGGAGGGAG CTTGAAGATTACAAATCACTTGCTGCACAAAATGTTCAACCAAACTCCTTGTTACATCTTGTCCGTACAAAGATACATTTGTGGCCAAGGGCACAAAGGG TTCCTGGTGAGAATAAGTCTTTACGTCCTCCAGGGGCATTCAAGAAAAAGTCTGATCTGTCAGTGAAAGACGGACATGTTTTTTTGATGGAGTATTGTGA GGAAAGGCCTTTACTTTTGAGTAATGTTGGAATGGGTGCAAGACTTTGTACTTACTATCAAAAATGTTCACCAGATGACCAATCTGGCTCCTTATTACGT AACACAAATAGTAGCTTGGGGCACATTATTTCTCTGGATCCTGCTGATAAATCTCCCTTCCTCGGTGATATAAAACCTGGTTGTAGTCAGTCATCACTCG AGACAAATATGTACAGAGCACCCTTATTTCCTCATAAAGTTCCGTTAACTGACTACCTGCTGGTTCGTTCATCAAAGGGAAAACTATCTTTAAGGCGCAT CGATAAAGTTAATGTTGTTGGACAGCAGGAGCCTCTCATGGAGGTATTATCACCTGGAAGTAAGAATCTTCAGACTTATATGATGAACAGGCTATTGGTG TACATGTGCCGTGAATTCCAAGCTGCAGAGAAGCGGCATTTACCTCCATACATTCGTATTGATGAGTTCTTGTCACAGTTTCCTTACCTTTCAGAAGCGT CTTTCCGCAAGAGAATCAAGGAATATGCCAATTTACAGAGGGGATCGAATGGACAATCAATTTTAGTTAAAAAGCGGAACTTTCGCATGTGGTCAGAAGA TGAATTAAGAAAAATGGTGACACCAGAGCTTGTTTGTGCCTATGAAAGCATGCAAGCTGGCCTGTATCGTCTAAAACATTTAGGAATAACTGAAACACAC CCTACTCATATTTCTTCTGCAATGAGTCGGCTTCCTGATGAAGCAATAGCACTGGCTGCTGCATCACACATTGAGAGGGAGCTACAAATTACTCCTTGGA ACTTGAGTAGCAATTTTGTTGCCTGTACAAGCCAGGGTAAGGAAAATATTGAGCGAATGGAAATTACTGGTGTTGGTGATCCATCTGGCCGTGGCATGGG TTTCAGCTATGCACGGGCACCTCCAAAGGCACCAGTGTCTAGTGCAATGGTGAAGAAGAAAGCTCCTGCTAATCGGGGAGGTTCCACTGTCACTGGTACA GATGCTGATCTACGTAGACTAAGCATGGAGGCTGCACGAGAGGTTCTTCTTAAGTTCAATGTTCCAGAGGAGGTCATTGCAAAACAAACCAGATGGCATC GCATTGCTATGATACGCAAACTTTCAAGTGAGCAAGCTGCATCTGGGGTTAAGGTTGATCCGTCAACTATCAGCAAATATGCTCGTGGGCAGCGGATGTC CTTTCTTCAGTTACAGCAGCAGACTAGAGAGAAGTGCCAGGAGATTTGGGATCGACAAATCCAGACTTTGTCAGCTATAAATTATGATGAAGATGAGAGT GAGTCAGAAGGAAATAGTGATCTAGACTCTTTTGCTGGAGATTTGGAAAATTTACTTGATGCTGAGGAGTTTGAGGAGGGTGAAGAGGGTACTAATGACT CAAAACGTGATAAGGGGGATGGTGTTAAGGGTCTTAAAATGAGAAGACGTGCAACTTCTGCCCAGGCAGAAGAGGAAATAGAAGACGAGGCAGCTGAGGC TGCTGAATTACGCAGGTTGCTTATGGATGATGATGAAGCTGACCGGAAGAAAAAGAAGAAAGCTAGAGTTGTGGTGGAAGAAGCAAGATTGGTACCAAAG CTACAATCAAAATTCATATTTGACAACAATGAAAAAGTTAACCAAATATCAAATACTTTGCAACTAGATGCTACTAAACATTGGAAAGAGGATATAATTA CAGATCTCAGGGAGGAGGAAATTTTTTCTTCTAAAAAAAGCAAATCAGTGAAGGTCAGTAAGGCAAAGAAGAATGACGCTGCACCTATCAGTCTACCCAA TAAAAAGATTAAATTAAATATGGGAGAACCAATCAAGGTATTTAAAGAGAAAAAACCATCAAGGGAAACTTTTGTTTGTGGAGCATGTGGCCAGCTTGGA CACATGAGAACAAACAAGAACTGTCCAAAATATGGTGAAGACCTTGAACCACAACTTGAATTTACAGACATGGAAAAATCATCTGGAAAAGCAGACCCCT CTAGTTATTCCCAGCGTAAAGCCCTCCCCAAAAAGTCAATATCAAATAGCGCAACAAGGATTGCTCCTGTTGAAAATTCATCAAAAATTCCACTGAAGTT CAAATGCAGCTCCAATGAGAAATCTTATGATAAACCTGCAATTGATACCCTGCAGAGTTCTGACAAGCCTGTCACTTCTGACACTGAAACTGCTAAGCCT GTTAAGGTCAATAAGATAACTTTTCCCAAGAAAGCGAAACCAGATGATACTCAGGCTGATTCTCATTCGCCTGCTATTGTTATACGGCCTCCTACTGATT CAGGTAGAGGTCAGATAGATTCTCATAATAAGCTCCCAATTAAAATAAGACAGCCACCGGTAGAAGTAGATAGGGAGCAATCGCACAAGAAGAAGATTGT TATAAAACACTCAAAGGAAGATTATTATAAAATTGATCAGGACCTGGACAGTCCTGGTGGAAACACGGGATTTGAACACAGAAAAACTAAAAGAATCGTT GAATTATCGAATCTTGAGAAGCAGAGAAATCAGCAGCCTATGTATTCAACTGAAGGTTTGGTAAAATGGAAAGGTAAAGAGGATAGAAGATGGTGGGAAG GGCAAGAGAAACAGAAAAATGAAGCAAGACTCAGAGAAGACAGGGCATGGAGGCATCACAAAGAATTCAAGATGCCGAAAGAGCAAAAGATAGATGAGAT TAGAAGATATGAAGAAGATATTAGAAGAGAGAGGGAGGAGGAAGAACGGCAAAAGGCAAAGAAAAAGAAGAAAAAACTCGAGTTTGGAGATGAATATTTA GATGACCCCAGAACAAGACATGATAAGAGGATGCTAGATAGGAGCGGAAAAAGAAGAAAAAACTCGAGTTTGGAGATGAATATTTAGATGACCCCAGAAC AAGACATGATAAGAGGATGCTAGATAGGAGCGGAAAAAGAAGATCTGTTGAGTTAGGAAAGGGTGGTGCAGAATATGTGCAGCCAATAAAACGCCGAAGA GGGGGAGGTGGAGAGGTTGGTTTGGCAAATATTTTGGAGAGCATTGTGGACTCCATTGTGAAAGACAGGAACGATCTGTCCTATCTATTCCTGAAACCGG TGTCGAAGAAAGTGGCACCTGACTACCTTGACATTATAGAGAGGCCTATGGATCTTTCCAGAATCAGGGAGAGGGTGAGGAATATGGAGTACAAGAGCAG AGAAGATTTCAGACATGATATGTGGCAGATAACTTACAATGCTCATAAATATAACGATGGCCGAAATCCAGGAATTCCTCCCCTAGCAGATATGCTTTTG GAACATTGTGATTATTTGTTGAATGAGAATGATGATAACCTCACTGCAGCTGAAGCTGGCATTGAAATTAGAGATTTGTAAGTCATGCTAAATTCAGATC ATGATATGAAGGTTAGGTAGAATTGTTTTAATTATTTTGGAATGTAGTATGGAAATGAGGTTGTAGTATCACCATCTATAGTTCATTAATTTAGATTCAT GTTGTGCCTCCTTTAGAGAGTTATATTAGATTAGATTTTATATTTGGTAGTTAAAAAAAAGAGCAAGATTTTTCTCTAAAGATATACACA BLAST |
| Tissue | pods |
| Gene name | LI_gene_193872; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_504995
| Blastp | Transcription initiation factor TFIID subunit 1 from Arabidopsis with 52.16% of identity |
|---|---|
| Blastx | Transcription initiation factor TFIID subunit 1 from Arabidopsis with 51.33% of identity |
| Eggnog | bromodomain(COG5076) |
| Kegg | Link to kegg annotations (AT1G32750) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019445197.1) |
| Pfam | TATA box-binding protein binding (PF09247.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |