Ll_transcript_505965

• Id Trinity: TRINITY_DN52580_c3_g1_i23
• Name Transcript: Ll_transcript_505965
• Sequence: TGCTGCCGGTGGAACACTTCTATCTTTTATGGACTCAGAAACAATGCTCTCTTTTGCCGGTCATGGTTTCCGGTCACCGGTCATCTTAAGTAAAATCTCT TAACCTGTTATTGTTTAATTTCTTTTGTTAGAAGAAAATGATGGAATAACAGTGAATTTTAATTTAATCTATAAAGATTATGGTTAATAATGGTGAATGG TGAATGAGAAATAATATGAAGAAGCTTAGATAAATTGGATGCTTGATTGAAGTTATTGGTGTTGCTTTGTGAATGAGGAACATTTTTGGAAACAAGTTTA GGGTTTTGTTTTGTTGGTGCTTTAGGTTTTTACGGTTTCGAAATTTTGCGAACTTTAACTCAGCTAAATCAAGTCTCTCTAATGGAAATGAGAGATGAAG CAATGTGTAGAGTGAATAGCCAAATGGATTTGTGAAAGATGTGACCAGCTTAACATTATTCATTGATGGAAGAGAAATGCTCATGTGGAGTATTCAGATC TTTTCGGGACTGTAATTTGACTATATTTATTCAAAAAGTAACTGACTGAAATTGCGGAGACTTGGCTTTCGCGATACACATGCCGGTTTTTTATCCAGGA AAAATGGGTTCAGGGGTGCAGTCTAGTCTCTAGTATTTTCTCAGATTACTATTTTCTTCATGCTGAATGAAATTTGCATTGTATTTATACGTTGGCGACC TGCTGGTTTACTAATGGAACAGTTAACAGGCAATAGAAGCTTAAGCTCCACAAAAATAGTAATATCTGTATTTACAGGATTCCTTTGTTTATTTTTGTCT CTTTAAAATCTCTGCTCTGAGATGATTGGTCAGATGTTATTTGTTCATTCTGATGAATGGATAAAATGCTCCTTCCTTTTGCTTGTCCTTTATTTCCTTG GTTTTCAACCCTGCCCTCCTTTCTTATTGAGGCATTCTTATCATCATTCATGGGCTTAACGAACATGGTGGAAGATATGCTGATTTCGCAAGGCAGTTAA CATCATGCCACTTTGGTGTTTATGCAATGGACTGGATAGGTCATGGAGGGAGTGATGGTTTGCATGGTTATGTTCCTTCTCTTGATCATGTCGTTGCAGA CACCGGAGCTTTCTTGGAAAAGGTTAGATCAGAGAATCCAGGGATACCATGCTTTCTCTTTGGTCACTCTACTGGAGGGGCTGTGGTTTTGAAAGCAGCT TCCCTCCCTCATATTGAAGTAATGGTGGAAGGAATTATACTAACCTCACCTGCTTTGCGAGTCAAGCCAGCTCATCCAATTGTTGGTGCTGTTGCTCCAA TTTTTTCTCTGGTAGCTCCTAAGTTCCAATTTAAAGGAGCAAACAAAAGAGGAATTCCAGTTTCGAGGGACCCAGAGGCTTTGTTGGCAAAGTACTCTGA TCCTTTGGTCTACACAGGACCTATAAGGGTCCGAACCGGCCATGAAATACTACGGATATCTTCTTACTTAATGCGGAACTTCAAGTCTGTCACAGTGCCA TTCTTTGTCCTGCATGGAACTGCCGATAAGGTAACTGATCCACTGGCCTCAGAAGATCTATACAACAAGGCAGCTTCAGAGTTCAAAGACATAAAACTTT ATGATGGCTTCTTGCATGATCTTCTGTTCGAGCCTGAGCGTGAAGAGATTGCTCGGGACATTATCAACTGGATGGAGAAGAGATTATTTGCGATTTGAAA ACGTCATGAAGCAAAAGTCGCCTGGGAAATGGGGCAGCATAAGTAGATAGATATAGGTGTTAGATATATATGACATGTGTGTGGATTGGTGTTCTATCAA GAAACTTGTACATTTAATAGAGTCAAGTTTCATTAGTGTTTTCGTCCCTAATCCCCACATTCATTCAATGTGTGATGTTTTCTGGGTTAATATCTATCAT GTTTGAGCATCTTGCTTTTAAGGTGTTTTTTGCATTATTCCAGTTCTTGTAAATAGTTTGGTTTACTTTTTTCACATGATAAGCATAATATTACTTCTTG TCCTCTTGAAGGGGAATGGCATGGCAAGGACAAACAAAATAGAGTTTAATTTTGTT
• Tissue: pods
• Gene name: LI_gene_193879;
• Additional information: details;

Expression of Ll_transcript_505965

FPKM

• PAB: 10.9
• PNAB: 0.2
• PS1: 0.1
• PS2: 0
• PS3: 0.2
• PW1: 0.8
• PW2: 0.1
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_505965

• Blastp: Caffeoylshikimate esterase from Arabidopsis with 36.4% of identity
• Blastx: Caffeoylshikimate esterase from Arabidopsis with 33.58% of identity
• Eggnog: alpha beta hydrolase fold(COG2267)
• Kegg: Link to kegg annotations (AT1G52760)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438428.1)
• Pfam: Serine aminopeptidase, S33 (PF12146.7)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;